Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetCHR3Q12
Enrichment Score (ES)0.5160909
Normalized Enrichment Score (NES)1.1592429
Nominal p-value0.19095477
FDR q-value0.5287889
FWER p-Value0.988
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR3Q12   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NFKBIZNFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]234.7870.1400Yes
2DCBLD2discoidin, CUB and LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24627]1693.6230.2426Yes
3FILIP1Lfilamin A interacting protein 1 like [Source:HGNC Symbol;Acc:HGNC:24589]4822.3990.3047Yes
4GMFBP1glia maturation factor beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38654]5122.3350.3725Yes
5ACTR3P3ACTR3 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38679]8571.7470.4146Yes
6TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]13851.2560.4372Yes
7ZBTB11zinc finger and BTB domain containing 11 [Source:HGNC Symbol;Acc:HGNC:16740]15861.1510.4656Yes
8NXPE3neurexophilin and PC-esterase domain family member 3 [Source:HGNC Symbol;Acc:HGNC:28238]19740.9570.4833Yes
9IMPG2interphotoreceptor matrix proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:18362]22090.8530.5021Yes
10ZBTB11-AS1ZBTB11 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48573]26630.6860.5100Yes
11ABI3BPABI family member 3 binding protein [Source:HGNC Symbol;Acc:HGNC:17265]31880.5570.5122Yes
12TFGtrafficking from ER to golgi regulator [Source:HGNC Symbol;Acc:HGNC:11758]35550.4680.5161Yes
13TBC1D23TBC1 domain family member 23 [Source:HGNC Symbol;Acc:HGNC:25622]48450.2110.4875No
14ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]59180.0070.4588No
15LINC02085long intergenic non-protein coding RNA 2085 [Source:HGNC Symbol;Acc:HGNC:27190]59710.0000.4574No
16ZPLD1zona pellucida like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:27022]65730.0000.4411No
17ZNF90P1zinc finger protein 90 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:12888]68930.0000.4325No
18ST3GAL6-AS1ST3GAL6 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40828]86170.0000.3860No
19FAM172BPfamily with sequence similarity 172 member B, pseudogene [Source:HGNC Symbol;Acc:HGNC:34336]88140.0000.3807No
20RNU6-26PRNA, U6 small nuclear 26, pseudogene [Source:HGNC Symbol;Acc:HGNC:34252]92200.0000.3698No
21PDLIM1P4PDZ and LIM domain 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:48947]94570.0000.3634No
22DUSP12P1dual specificity phosphatase 12 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:49059]103590.0000.3391No
23TMEM30CPtransmembrane protein 30C, pseudogene [Source:HGNC Symbol;Acc:HGNC:30443]107210.0000.3294No
24LINC00973long intergenic non-protein coding RNA 973 [Source:HGNC Symbol;Acc:HGNC:48868]117800.0000.3008No
25TMEM45Atransmembrane protein 45A [Source:HGNC Symbol;Acc:HGNC:25480]146070.0000.2245No
26RNU6-865PRNA, U6 small nuclear 865, pseudogene [Source:HGNC Symbol;Acc:HGNC:47828]170250.0000.1593No
27COL8A1collagen type VIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2215]192290.0000.0998No
28ACTG1P13actin gamma 1 pseudogene 13 [Source:HGNC Symbol;Acc:HGNC:49058]197810.0000.0850No
29RNU6-461PRNA, U6 small nuclear 461, pseudogene [Source:HGNC Symbol;Acc:HGNC:47424]205790.0000.0634No
30MIR3921microRNA 3921 [Source:HGNC Symbol;Acc:HGNC:38936]207900.0000.0578No
31ADGRG7adhesion G protein-coupled receptor G7 [Source:HGNC Symbol;Acc:HGNC:19241]242040.000-0.0344No
32LNP1leukemia NUP98 fusion partner 1 [Source:HGNC Symbol;Acc:HGNC:28014]249630.000-0.0548No
33RNU6-1256PRNA, U6 small nuclear 1256, pseudogene [Source:HGNC Symbol;Acc:HGNC:48219]259720.000-0.0820No
34RNU6-1263PRNA, U6 small nuclear 1263, pseudogene [Source:HGNC Symbol;Acc:HGNC:48226]262550.000-0.0896No
35TOMM70translocase of outer mitochondrial membrane 70 [Source:HGNC Symbol;Acc:HGNC:11985]27513-0.027-0.1228No
36PDCL3P4PDCL3 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:44505]27532-0.031-0.1223No
37CMSS1cms1 ribosomal small subunit homolog [Source:HGNC Symbol;Acc:HGNC:28666]28456-0.172-0.1422No
38VTI1BP1vesicle transport through interaction with t-SNAREs 1B pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:43727]29398-0.311-0.1585No
39RPL24ribosomal protein L24 [Source:HGNC Symbol;Acc:HGNC:10325]29771-0.365-0.1578No
40PCNPPEST proteolytic signal containing nuclear protein [Source:HGNC Symbol;Acc:HGNC:30023]32142-0.790-0.1986No
41NIT2nitrilase family member 2 [Source:HGNC Symbol;Acc:HGNC:29878]35209-1.937-0.2244No
42WWP1P1WW domain containing E3 ubiquitin protein ligase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48944]35838-2.410-0.1705No
43SENP7SUMO specific peptidase 7 [Source:HGNC Symbol;Acc:HGNC:30402]36467-3.067-0.0974No
44CEP97centrosomal protein 97 [Source:HGNC Symbol;Acc:HGNC:26244]36899-3.8850.0052No
Table: GSEA details [plain text format]



Fig 2: CHR3Q12   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR3Q12: Random ES distribution   
Gene set null distribution of ES for CHR3Q12