Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_NA |
| GeneSet | CHR6P25 |
| Enrichment Score (ES) | -0.65017664 |
| Normalized Enrichment Score (NES) | -1.2937335 |
| Nominal p-value | 0.07017544 |
| FDR q-value | 0.6177888 |
| FWER p-Value | 0.999 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | SERPINB9 | serpin family B member 9 [Source:HGNC Symbol;Acc:HGNC:8955] | 705 | 1.952 | 0.0447 | No |
| 2 | PSMC1P11 | proteasome 26S subunit, ATPase 1 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:39786] | 1766 | 1.052 | 0.0504 | No |
| 3 | IRF4 | interferon regulatory factor 4 [Source:HGNC Symbol;Acc:HGNC:6119] | 2971 | 0.608 | 0.0378 | No |
| 4 | FAM136BP | family with sequence similarity 136 member B, pseudogene [Source:HGNC Symbol;Acc:HGNC:21110] | 4154 | 0.351 | 0.0173 | No |
| 5 | PSMG4 | proteasome assembly chaperone 4 [Source:HGNC Symbol;Acc:HGNC:21108] | 5001 | 0.178 | 0.0003 | No |
| 6 | RIPK1 | receptor interacting serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:10019] | 5011 | 0.176 | 0.0058 | No |
| 7 | LYRM4 | LYR motif containing 4 [Source:HGNC Symbol;Acc:HGNC:21365] | 5878 | 0.016 | -0.0171 | No |
| 8 | TDGF1P4 | teratocarcinoma-derived growth factor 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:11704] | 6827 | 0.000 | -0.0427 | No |
| 9 | LINC01600 | long intergenic non-protein coding RNA 1600 [Source:HGNC Symbol;Acc:HGNC:21600] | 6980 | 0.000 | -0.0468 | No |
| 10 | LINC01011 | long intergenic non-protein coding RNA 1011 [Source:HGNC Symbol;Acc:HGNC:33812] | 7714 | 0.000 | -0.0666 | No |
| 11 | AL159166.1 | novel transcript | 8389 | 0.000 | -0.0848 | No |
| 12 | C6orf201 | chromosome 6 open reading frame 201 [Source:HGNC Symbol;Acc:HGNC:21620] | 8641 | 0.000 | -0.0916 | No |
| 13 | LY86 | lymphocyte antigen 86 [Source:HGNC Symbol;Acc:HGNC:16837] | 8874 | 0.000 | -0.0979 | No |
| 14 | OR4F1P | olfactory receptor family 4 subfamily F member 1 pseudogene [Source:HGNC Symbol;Acc:HGNC:8298] | 11356 | 0.000 | -0.1649 | No |
| 15 | AL021328.1 | novel transcript, antisense to FARS2 | 13541 | 0.000 | -0.2239 | No |
| 16 | FAM217A | family with sequence similarity 217 member A [Source:HGNC Symbol;Acc:HGNC:21362] | 13897 | 0.000 | -0.2335 | No |
| 17 | LINC02533 | long intergenic non-protein coding RNA 2533 [Source:HGNC Symbol;Acc:HGNC:53566] | 14392 | 0.000 | -0.2468 | No |
| 18 | LINC02525 | long intergenic non-protein coding RNA 2525 [Source:HGNC Symbol;Acc:HGNC:53545] | 14406 | 0.000 | -0.2472 | No |
| 19 | LINC02521 | long intergenic non-protein coding RNA 2521 [Source:HGNC Symbol;Acc:HGNC:53560] | 14411 | 0.000 | -0.2473 | No |
| 20 | MIR5683 | microRNA 5683 [Source:HGNC Symbol;Acc:HGNC:43453] | 15250 | 0.000 | -0.2699 | No |
| 21 | PXDC1 | PX domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21361] | 15328 | 0.000 | -0.2720 | No |
| 22 | AL035696.3 | novel transcript | 15461 | 0.000 | -0.2756 | No |
| 23 | RN7SL554P | RNA, 7SL, cytoplasmic 554, pseudogene [Source:HGNC Symbol;Acc:HGNC:46570] | 15652 | 0.000 | -0.2807 | No |
| 24 | HMGN2P28 | high mobility group nucleosomal binding domain 2 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:39395] | 15797 | 0.000 | -0.2846 | No |
| 25 | SNAPC5P1 | small nuclear RNA activating complex polypeptide 5 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38667] | 15978 | 0.000 | -0.2895 | No |
| 26 | WBP1LP12 | WBP1L pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:51472] | 16201 | 0.000 | -0.2955 | No |
| 27 | PPP1R3G | protein phosphatase 1 regulatory subunit 3G [Source:HGNC Symbol;Acc:HGNC:14945] | 17542 | 0.000 | -0.3316 | No |
| 28 | LY86-AS1 | LY86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26593] | 18964 | 0.000 | -0.3700 | No |
| 29 | AL022097.1 | novel transcript, antisense to FARS2 | 19136 | 0.000 | -0.3747 | No |
| 30 | RNA5SP202 | RNA, 5S ribosomal pseudogene 202 [Source:HGNC Symbol;Acc:HGNC:43102] | 19272 | 0.000 | -0.3783 | No |
| 31 | RNA5SP201 | RNA, 5S ribosomal pseudogene 201 [Source:HGNC Symbol;Acc:HGNC:43101] | 19273 | 0.000 | -0.3783 | No |
| 32 | SERPINB9P1 | serpin family B member 9 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:28590] | 19675 | 0.000 | -0.3891 | No |
| 33 | RN7SL352P | RNA, 7SL, cytoplasmic 352, pseudogene [Source:HGNC Symbol;Acc:HGNC:46368] | 19877 | 0.000 | -0.3946 | No |
| 34 | SERPINB8P1 | serpin family B member 8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:8953] | 20591 | 0.000 | -0.4138 | No |
| 35 | CNN3P1 | calponin 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:38666] | 21973 | 0.000 | -0.4511 | No |
| 36 | GMDS-DT | GMDS divergent transcript [Source:HGNC Symbol;Acc:HGNC:48993] | 22151 | 0.000 | -0.4559 | No |
| 37 | MIR3691 | microRNA 3691 [Source:HGNC Symbol;Acc:HGNC:38909] | 22472 | 0.000 | -0.4646 | No |
| 38 | F13A1 | coagulation factor XIII A chain [Source:HGNC Symbol;Acc:HGNC:3531] | 22725 | 0.000 | -0.4714 | No |
| 39 | HUS1B | HUS1 checkpoint clamp component B [Source:HGNC Symbol;Acc:HGNC:16485] | 22797 | 0.000 | -0.4733 | No |
| 40 | CICP18 | capicua transcriptional repressor pseudogene 18 [Source:HGNC Symbol;Acc:HGNC:48828] | 22955 | 0.000 | -0.4775 | No |
| 41 | FAM50B | family with sequence similarity 50 member B [Source:HGNC Symbol;Acc:HGNC:18789] | 23049 | 0.000 | -0.4800 | No |
| 42 | MYLK4 | myosin light chain kinase family member 4 [Source:HGNC Symbol;Acc:HGNC:27972] | 23310 | 0.000 | -0.4871 | No |
| 43 | FOXQ1 | forkhead box Q1 [Source:HGNC Symbol;Acc:HGNC:20951] | 23311 | 0.000 | -0.4871 | No |
| 44 | FOXF2 | forkhead box F2 [Source:HGNC Symbol;Acc:HGNC:3810] | 23474 | 0.000 | -0.4914 | No |
| 45 | RN7SL221P | RNA, 7SL, cytoplasmic 221, pseudogene [Source:HGNC Symbol;Acc:HGNC:46237] | 24339 | 0.000 | -0.5148 | No |
| 46 | SLC22A23 | solute carrier family 22 member 23 [Source:HGNC Symbol;Acc:HGNC:21106] | 26599 | 0.000 | -0.5758 | No |
| 47 | FOXCUT | FOXC1 upstream transcript [Source:HGNC Symbol;Acc:HGNC:50650] | 26720 | 0.000 | -0.5790 | No |
| 48 | MIR4645 | microRNA 4645 [Source:HGNC Symbol;Acc:HGNC:41689] | 26803 | 0.000 | -0.5812 | No |
| 49 | CDYL | chromodomain Y like [Source:HGNC Symbol;Acc:HGNC:1811] | 27542 | -0.033 | -0.6001 | No |
| 50 | BTF3P7 | basic transcription factor 3 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:38569] | 29190 | -0.279 | -0.6355 | No |
| 51 | NRN1 | neuritin 1 [Source:HGNC Symbol;Acc:HGNC:17972] | 29709 | -0.357 | -0.6378 | Yes |
| 52 | PRPF4B | pre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346] | 29907 | -0.384 | -0.6306 | Yes |
| 53 | HNRNPA1P37 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 37 [Source:HGNC Symbol;Acc:HGNC:48766] | 30613 | -0.496 | -0.6334 | Yes |
| 54 | EXOC2 | exocyst complex component 2 [Source:HGNC Symbol;Acc:HGNC:24968] | 31235 | -0.599 | -0.6306 | Yes |
| 55 | TUBB2BP1 | tubulin beta 2B class IIb pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42332] | 31501 | -0.652 | -0.6165 | Yes |
| 56 | SERPINB6 | serpin family B member 6 [Source:HGNC Symbol;Acc:HGNC:8950] | 32333 | -0.846 | -0.6113 | Yes |
| 57 | GMDS | GDP-mannose 4,6-dehydratase [Source:HGNC Symbol;Acc:HGNC:4369] | 32724 | -0.952 | -0.5907 | Yes |
| 58 | AL033523.1 | novel transcript | 32857 | -0.992 | -0.5619 | Yes |
| 59 | GLRX3P2 | glutaredoxin 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49788] | 33009 | -1.040 | -0.5320 | Yes |
| 60 | FOXC1 | forkhead box C1 [Source:HGNC Symbol;Acc:HGNC:3800] | 33087 | -1.058 | -0.4996 | Yes |
| 61 | WRNIP1 | WRN helicase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:20876] | 33128 | -1.071 | -0.4657 | Yes |
| 62 | FARS2 | phenylalanyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:21062] | 33407 | -1.162 | -0.4352 | Yes |
| 63 | BPHL | biphenyl hydrolase like [Source:HGNC Symbol;Acc:HGNC:1094] | 34172 | -1.436 | -0.4090 | Yes |
| 64 | PKMP5 | pyruvate kinase M1/2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:44247] | 34227 | -1.459 | -0.3628 | Yes |
| 65 | RPP40 | ribonuclease P/MRP subunit p40 [Source:HGNC Symbol;Acc:HGNC:20992] | 34317 | -1.493 | -0.3164 | Yes |
| 66 | TUBB2A | tubulin beta 2A class IIa [Source:HGNC Symbol;Acc:HGNC:12412] | 34362 | -1.510 | -0.2683 | Yes |
| 67 | TUBB2B | tubulin beta 2B class IIb [Source:HGNC Symbol;Acc:HGNC:30829] | 35051 | -1.834 | -0.2270 | Yes |
| 68 | SERPINB1 | serpin family B member 1 [Source:HGNC Symbol;Acc:HGNC:3311] | 35081 | -1.851 | -0.1674 | Yes |
| 69 | NQO2 | N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856] | 35302 | -1.996 | -0.1081 | Yes |
| 70 | ECI2 | enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601] | 35652 | -2.237 | -0.0445 | Yes |
| 71 | DUSP22 | dual specificity phosphatase 22 [Source:HGNC Symbol;Acc:HGNC:16077] | 36000 | -2.552 | 0.0294 | Yes |
