Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCHR7Q36
Enrichment Score (ES)-0.6395264
Normalized Enrichment Score (NES)-1.3530334
Nominal p-value0.0065717413
FDR q-value0.45724326
FWER p-Value0.991
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR7Q36   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PIP5K1P2phosphatidylinositol-4-phosphate 5-kinase type 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:38068]10461.524-0.0050No
2SLC4A2solute carrier family 4 member 2 [Source:HGNC Symbol;Acc:HGNC:11028]11411.4330.0143No
3RHEBRas homolog, mTORC1 binding [Source:HGNC Symbol;Acc:HGNC:10011]12321.3670.0328No
4CHPF2chondroitin polymerizing factor 2 [Source:HGNC Symbol;Acc:HGNC:29270]19760.9560.0273No
5GBX1gastrulation brain homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4185]20410.9260.0397No
6DNAJB6DnaJ heat shock protein family (Hsp40) member B6 [Source:HGNC Symbol;Acc:HGNC:14888]22390.8410.0472No
7ABCF2ATP binding cassette subfamily F member 2 [Source:HGNC Symbol;Acc:HGNC:71]23110.8110.0576No
8SEPTIN7P6septin 7 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:38042]26800.6810.0581No
9BET1P1Bet1 golgi vesicular membrane trafficking protein pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51363]40000.3730.0281No
10NUB1negative regulator of ubiquitin like proteins 1 [Source:HGNC Symbol;Acc:HGNC:17623]42780.3240.0256No
11FABP5P3fatty acid binding protein 5 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:22573]44480.2880.0254No
12MIR671microRNA 671 [Source:HGNC Symbol;Acc:HGNC:33134]45400.2690.0270No
13PTPRN2protein tyrosine phosphatase receptor type N2 [Source:HGNC Symbol;Acc:HGNC:9677]52720.1350.0093No
14COX6B1P1cytochrome c oxidase subunit 6B1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:2281]54060.1100.0074No
15NOM1nucleolar protein with MIF4G domain 1 [Source:HGNC Symbol;Acc:HGNC:13244]55660.0770.0043No
16ZNF767Pzinc finger family member 767, pseudogene [Source:HGNC Symbol;Acc:HGNC:21884]56290.0660.0036No
17UBE3Cubiquitin protein ligase E3C [Source:HGNC Symbol;Acc:HGNC:16803]59530.004-0.0051No
18GIMAP5GTPase, IMAP family member 5 [Source:HGNC Symbol;Acc:HGNC:18005]59790.000-0.0058No
19AOC1amine oxidase copper containing 1 [Source:HGNC Symbol;Acc:HGNC:80]60410.000-0.0074No
20LINC00689long intergenic non-protein coding RNA 689 [Source:HGNC Symbol;Acc:HGNC:27217]61190.000-0.0095No
21MIR153-2microRNA 153-2 [Source:HGNC Symbol;Acc:HGNC:31540]63230.000-0.0150No
22GIMAP1-GIMAP5GIMAP1-GIMAP5 readthrough [Source:HGNC Symbol;Acc:HGNC:51257]64700.000-0.0190No
23LINC01287long intergenic non-protein coding RNA 1287 [Source:HGNC Symbol;Acc:HGNC:50351]67770.000-0.0272No
24PAXBP1P1PAX3 and PAX7 binding protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50352]69170.000-0.0310No
25CCT8L1Pchaperonin containing TCP1 subunit 8 like 1, pseudogene [Source:HGNC Symbol;Acc:HGNC:32153]73270.000-0.0421No
26ASIC3acid sensing ion channel subunit 3 [Source:HGNC Symbol;Acc:HGNC:101]75780.000-0.0488No
27AC093583.1uncharacterized LOC644090 [Source:NCBI gene (formerly Entrezgene);Acc:644090]76970.000-0.0520No
28CNPY1canopy FGF signaling regulator 1 [Source:HGNC Symbol;Acc:HGNC:27786]77080.000-0.0523No
29LINC01003long intergenic non-protein coding RNA 1003 [Source:HGNC Symbol;Acc:HGNC:48957]77210.000-0.0526No
30LINC01006long intergenic non-protein coding RNA 1006 [Source:HGNC Symbol;Acc:HGNC:48971]77230.000-0.0526No
31LINC01022long intergenic non-protein coding RNA 1022 [Source:HGNC Symbol;Acc:HGNC:48998]86630.000-0.0781No
32AC004941.1uncharacterized LOC101928733 [Source:NCBI gene (formerly Entrezgene);Acc:101928733]91290.000-0.0906No
33AC005481.1novel transcript, antisense to PTPRN2101740.000-0.1189No
34SSPOPSCO-spondin, pseudogene [Source:HGNC Symbol;Acc:HGNC:21998]102160.000-0.1200No
35BLACEB cell acute lymphoblastic leukemia expressed [Source:HGNC Symbol;Acc:HGNC:20484]108090.000-0.1360No
36LINC00996long intergenic non-protein coding RNA 996 [Source:HGNC Symbol;Acc:HGNC:27800]118040.000-0.1629No
37RNU4-31PRNA, U4 small nuclear 31, pseudogene [Source:HGNC Symbol;Acc:HGNC:46967]119480.000-0.1668No
38GHET1gastric carcinoma proliferation enhancing transcript 1 [Source:HGNC Symbol;Acc:HGNC:49425]127870.000-0.1895No
39LINC00244long intergenic non-protein coding RNA 244 [Source:HGNC Symbol;Acc:HGNC:13245]131080.000-0.1981No
40VIPR2vasoactive intestinal peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:12695]132160.000-0.2010No
41THAP5P1THAP domain containing 5 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:22340]148640.000-0.2456No
42MIR5707microRNA 5707 [Source:HGNC Symbol;Acc:HGNC:43449]151070.000-0.2521No
43RNU7-20PRNA, U7 small nuclear 20 pseudogene [Source:HGNC Symbol;Acc:HGNC:34116]154020.000-0.2601No
44RNU6-650PRNA, U6 small nuclear 650, pseudogene [Source:HGNC Symbol;Acc:HGNC:47613]154730.000-0.2620No
45HTR5A5-hydroxytryptamine receptor 5A [Source:HGNC Symbol;Acc:HGNC:5300]155470.000-0.2639No
46MNX1-AS1MNX1 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:48954]156810.000-0.2675No
47MNX1-AS2MNX1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40278]156820.000-0.2675No
48RN7SL569PRNA, 7SL, cytoplasmic 569, pseudogene [Source:HGNC Symbol;Acc:HGNC:46585]159160.000-0.2738No
49EN2engrailed homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3343]163380.000-0.2852No
50RNF32ring finger protein 32 [Source:HGNC Symbol;Acc:HGNC:17118]164540.000-0.2884No
51RNU6-604PRNA, U6 small nuclear 604, pseudogene [Source:HGNC Symbol;Acc:HGNC:47567]169290.000-0.3012No
52RN7SL521PRNA, 7SL, cytoplasmic 521, pseudogene [Source:HGNC Symbol;Acc:HGNC:46537]173280.000-0.3119No
53PRKAG2-AS1PRKAG2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40468]175010.000-0.3166No
54DPP6dipeptidyl peptidase like 6 [Source:HGNC Symbol;Acc:HGNC:3010]178770.000-0.3267No
55RN7SKP280RN7SK pseudogene 280 [Source:HGNC Symbol;Acc:HGNC:46004]179390.000-0.3284No
56WDR86WD repeat domain 86 [Source:HGNC Symbol;Acc:HGNC:28020]183080.000-0.3384No
57WDR86-AS1WDR86 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41186]183990.000-0.3408No
58IQCA1LIQ motif containing with AAA domain 1 like [Source:HGNC Symbol;Acc:HGNC:22831]184160.000-0.3412No
59GIMAP3PGTPase, IMAP family member 3 pseudogene [Source:HGNC Symbol;Acc:HGNC:30975]188730.000-0.3536No
60AC099552.2novel transcript188800.000-0.3537No
61KRBA1KRAB-A domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22228]191810.000-0.3618No
62PAXIP1-AS2PAXIP1 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:48958]192130.000-0.3627No
63MNX1motor neuron and pancreas homeobox 1 [Source:HGNC Symbol;Acc:HGNC:4979]194430.000-0.3689No
64RN7SL76PRNA, 7SL, cytoplasmic 76, pseudogene [Source:HGNC Symbol;Acc:HGNC:46092]195940.000-0.3729No
65RN7SL72PRNA, 7SL, cytoplasmic 72, pseudogene [Source:HGNC Symbol;Acc:HGNC:46088]196080.000-0.3733No
66HTR5A-AS1HTR5A antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48956]200670.000-0.3857No
67GALNTL5polypeptide N-acetylgalactosaminyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:21725]203920.000-0.3944No
68MIR3907microRNA 3907 [Source:HGNC Symbol;Acc:HGNC:38988]208000.000-0.4055No
69SHHsonic hedgehog signaling molecule [Source:HGNC Symbol;Acc:HGNC:10848]208240.000-0.4061No
70ZNF425zinc finger protein 425 [Source:HGNC Symbol;Acc:HGNC:20690]220750.000-0.4399No
71RNY3RNA, Ro60-associated Y3 [Source:HGNC Symbol;Acc:HGNC:10243]225360.000-0.4524No
72RNY4RNA, Ro60-associated Y4 [Source:HGNC Symbol;Acc:HGNC:10244]225370.000-0.4524No
73RNY1RNA, Ro60-associated Y1 [Source:HGNC Symbol;Acc:HGNC:10242]225380.000-0.4524No
74MIR595microRNA 595 [Source:HGNC Symbol;Acc:HGNC:32851]226300.000-0.4548No
75RN7SL845PRNA, 7SL, cytoplasmic 845, pseudogene [Source:HGNC Symbol;Acc:HGNC:46861]228670.000-0.4612No
76AC009403.1novel transcript, antisense to RBM33229930.000-0.4646No
77C7orf33chromosome 7 open reading frame 33 [Source:HGNC Symbol;Acc:HGNC:21724]232780.000-0.4723No
78ATP6V0E2-AS1ATP6V0E2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44180]240320.000-0.4926No
79ZBED6CLZBED6 C-terminal like [Source:HGNC Symbol;Acc:HGNC:21720]241440.000-0.4956No
80RARRES2retinoic acid receptor responder 2 [Source:HGNC Symbol;Acc:HGNC:9868]242140.000-0.4975No
81YBX1P4Y-box binding protein 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:42425]249540.000-0.5175No
82GIMAP1GTPase, IMAP family member 1 [Source:HGNC Symbol;Acc:HGNC:23237]249710.000-0.5179No
83GIMAP2GTPase, IMAP family member 2 [Source:HGNC Symbol;Acc:HGNC:21789]249720.000-0.5179No
84GIMAP4GTPase, IMAP family member 4 [Source:HGNC Symbol;Acc:HGNC:21872]249730.000-0.5179No
85GIMAP6GTPase, IMAP family member 6 [Source:HGNC Symbol;Acc:HGNC:21918]249750.000-0.5180No
86GIMAP7GTPase, IMAP family member 7 [Source:HGNC Symbol;Acc:HGNC:22404]249760.000-0.5180No
87GIMAP8GTPase, IMAP family member 8 [Source:HGNC Symbol;Acc:HGNC:21792]249770.000-0.5180No
88AC006372.3novel transcript266320.000-0.5627No
89ZNF783zinc finger family member 783 [Source:HGNC Symbol;Acc:HGNC:27222]27408-0.006-0.5836No
90ZNF786zinc finger protein 786 [Source:HGNC Symbol;Acc:HGNC:21806]27996-0.102-0.5979No
91KCNH2potassium voltage-gated channel subfamily H member 2 [Source:HGNC Symbol;Acc:HGNC:6251]28202-0.135-0.6014No
92FASTKFas activated serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:24676]28464-0.173-0.6058No
93RPS27AP12ribosomal protein S27a pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:35732]28539-0.183-0.6050No
94SMARCD3SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [Source:HGNC Symbol;Acc:HGNC:11108]28900-0.233-0.6112No
95TMEM176Btransmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]29368-0.306-0.6192No
96NPM1P12nucleophosmin 1 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:7914]30121-0.416-0.6332Yes
97RBM33RNA binding motif protein 33 [Source:HGNC Symbol;Acc:HGNC:27223]30155-0.420-0.6276Yes
98ACTR3Cactin related protein 3C [Source:HGNC Symbol;Acc:HGNC:37282]30185-0.427-0.6219Yes
99ZNF212zinc finger protein 212 [Source:HGNC Symbol;Acc:HGNC:13004]30246-0.437-0.6169Yes
100PDIA4protein disulfide isomerase family A member 4 [Source:HGNC Symbol;Acc:HGNC:30167]30299-0.446-0.6115Yes
101ZNF746zinc finger protein 746 [Source:HGNC Symbol;Acc:HGNC:21948]30982-0.555-0.6214Yes
102TMUB1transmembrane and ubiquitin like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21709]31234-0.599-0.6191Yes
103ALDH7A1P3aldehyde dehydrogenase 7 family member A1 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:880]31360-0.624-0.6129Yes
104CRYGNcrystallin gamma N [Source:HGNC Symbol;Acc:HGNC:20458]31617-0.674-0.6096Yes
105CUL1cullin 1 [Source:HGNC Symbol;Acc:HGNC:2551]31886-0.728-0.6057Yes
106ZNF398zinc finger protein 398 [Source:HGNC Symbol;Acc:HGNC:18373]31998-0.753-0.5972Yes
107ATP5PBP3ATP synthase peripheral stalk-membrane subunit b pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:39744]32172-0.802-0.5896Yes
108REPIN1replication initiator 1 [Source:HGNC Symbol;Acc:HGNC:17922]32181-0.806-0.5775Yes
109XRCC2X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]32314-0.842-0.5683Yes
110KMT2Clysine methyltransferase 2C [Source:HGNC Symbol;Acc:HGNC:13726]32519-0.891-0.5602Yes
111STRADBP1STE20-related kinase adaptor beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:22478]32660-0.932-0.5497Yes
112ZNF467zinc finger protein 467 [Source:HGNC Symbol;Acc:HGNC:23154]32718-0.950-0.5368Yes
113ACTR3Bactin related protein 3B [Source:HGNC Symbol;Acc:HGNC:17256]32763-0.961-0.5233Yes
114ABCB8ATP binding cassette subfamily B member 8 [Source:HGNC Symbol;Acc:HGNC:49]33058-1.050-0.5152Yes
115TMEM176Atransmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]33334-1.138-0.5052Yes
116INSIG1insulin induced gene 1 [Source:HGNC Symbol;Acc:HGNC:6083]34221-1.457-0.5070Yes
117LRRC61leucine rich repeat containing 61 [Source:HGNC Symbol;Acc:HGNC:21704]34272-1.476-0.4858Yes
118ZNF862zinc finger protein 862 [Source:HGNC Symbol;Acc:HGNC:34519]34442-1.542-0.4668Yes
119ZNF282zinc finger protein 282 [Source:HGNC Symbol;Acc:HGNC:13076]34455-1.546-0.4435Yes
120ATP6V0E2ATPase H+ transporting V0 subunit e2 [Source:HGNC Symbol;Acc:HGNC:21723]34474-1.554-0.4202Yes
121ZNF775zinc finger protein 775 [Source:HGNC Symbol;Acc:HGNC:28501]34554-1.580-0.3982Yes
122ASB10ankyrin repeat and SOCS box containing 10 [Source:HGNC Symbol;Acc:HGNC:17185]34579-1.593-0.3746Yes
123ATG9Bautophagy related 9B [Source:HGNC Symbol;Acc:HGNC:21899]34665-1.633-0.3519Yes
124CDK5cyclin dependent kinase 5 [Source:HGNC Symbol;Acc:HGNC:1774]34867-1.729-0.3309Yes
125ESYT2extended synaptotagmin 2 [Source:HGNC Symbol;Acc:HGNC:22211]34988-1.798-0.3067Yes
126ZNF777zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]35206-1.934-0.2831Yes
127AGAP3ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:HGNC Symbol;Acc:HGNC:16923]35428-2.081-0.2573Yes
128NOS3nitric oxide synthase 3 [Source:HGNC Symbol;Acc:HGNC:7876]36015-2.565-0.2339Yes
129EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]36065-2.624-0.1952Yes
130NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]36122-2.676-0.1558Yes
131GALNT11polypeptide N-acetylgalactosaminyltransferase 11 [Source:HGNC Symbol;Acc:HGNC:19875]36176-2.736-0.1155Yes
132LMBR1limb development membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:13243]36296-2.843-0.0753Yes
133PAXIP1PAX interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8624]36313-2.864-0.0320Yes
134PRKAG2protein kinase AMP-activated non-catalytic subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:9386]36727-3.4670.0098Yes
Table: GSEA details [plain text format]



Fig 2: CHR7Q36   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR7Q36: Random ES distribution   
Gene set null distribution of ES for CHR7Q36