Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCROONQUIST_NRAS_SIGNALING_DN
Enrichment Score (ES)-0.8539843
Normalized Enrichment Score (NES)-1.703177
Nominal p-value0.0
FDR q-value2.3931416E-4
FWER p-Value0.003
Table: GSEA Results Summary



Fig 1: Enrichment plot: CROONQUIST_NRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GNAI1G protein subunit alpha i1 [Source:HGNC Symbol;Acc:HGNC:4384]15311.178-0.0337No
2SBNO2strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]16751.104-0.0304No
3HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]17791.048-0.0264No
4EIF5eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:HGNC:3299]24600.759-0.0398No
5SNRPA1small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:HGNC:11152]52210.147-0.1134No
6MYRFmyelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]53750.114-0.1168No
7APOBEC3Bapolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]123140.000-0.3042No
8CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]239560.000-0.6187No
9ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]260190.000-0.6744No
10PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]30719-0.514-0.7980No
11PLOD2procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]30997-0.558-0.8018No
12CSE1Lchromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]31993-0.752-0.8238No
13CHEK1checkpoint kinase 1 [Source:HGNC Symbol;Acc:HGNC:1925]32734-0.955-0.8376No
14PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32753-0.958-0.8319No
15CHAF1Achromatin assembly factor 1 subunit A [Source:HGNC Symbol;Acc:HGNC:1910]33107-1.065-0.8345No
16RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33208-1.098-0.8301No
17DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]34095-1.401-0.8449Yes
18CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]34146-1.427-0.8370Yes
19HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34312-1.491-0.8318Yes
20CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]34381-1.518-0.8237Yes
21BRD8bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]34385-1.519-0.8139Yes
22POLD3DNA polymerase delta 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:20932]34420-1.534-0.8049Yes
23MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34684-1.643-0.8013Yes
24PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34837-1.712-0.7943Yes
25MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35062-1.840-0.7884Yes
26TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]35064-1.841-0.7765Yes
27PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]35101-1.865-0.7654Yes
28CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35199-1.931-0.7555Yes
29OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]35217-1.946-0.7433Yes
30NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35290-1.989-0.7323Yes
31AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35380-2.050-0.7214Yes
32CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]35407-2.067-0.7087Yes
33STILSTIL centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]35542-2.150-0.6984Yes
34CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]35605-2.200-0.6857Yes
35SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35759-2.331-0.6747Yes
36GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35776-2.350-0.6599Yes
37CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35813-2.385-0.6454Yes
38SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]35933-2.484-0.6325Yes
39TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35941-2.490-0.6165Yes
40RAD51CRAD51 paralog C [Source:HGNC Symbol;Acc:HGNC:9820]35952-2.508-0.6005Yes
41CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35993-2.546-0.5851Yes
42MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36125-2.680-0.5712Yes
43TRAIPTRAF interacting protein [Source:HGNC Symbol;Acc:HGNC:30764]36174-2.734-0.5547Yes
44SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]36199-2.753-0.5375Yes
45BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36239-2.787-0.5205Yes
46STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36260-2.803-0.5028Yes
47MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36350-2.926-0.4862Yes
48CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36367-2.940-0.4676Yes
49SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]36391-2.970-0.4489Yes
50H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36457-3.057-0.4308Yes
51TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36461-3.062-0.4110Yes
52POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]36466-3.065-0.3912Yes
53UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36476-3.083-0.3715Yes
54PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36502-3.111-0.3519Yes
55MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36508-3.121-0.3318Yes
56NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36546-3.187-0.3121Yes
57MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36575-3.228-0.2919Yes
58GPX4glutathione peroxidase 4 [Source:HGNC Symbol;Acc:HGNC:4556]36617-3.295-0.2716Yes
59CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36660-3.369-0.2509Yes
60CHEK2checkpoint kinase 2 [Source:HGNC Symbol;Acc:HGNC:16627]36690-3.417-0.2295Yes
61AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36698-3.424-0.2074Yes
62KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36700-3.426-0.1852Yes
63KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36709-3.440-0.1631Yes
64KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36710-3.442-0.1408Yes
65GALEUDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]36720-3.454-0.1186Yes
66PTP4A3protein tyrosine phosphatase 4A3 [Source:HGNC Symbol;Acc:HGNC:9636]36735-3.479-0.0964Yes
67FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36828-3.703-0.0748Yes
68WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]36844-3.755-0.0508Yes
69NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36994-4.180-0.0277Yes
70TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37070-4.6660.0005Yes
Table: GSEA details [plain text format]



Fig 2: CROONQUIST_NRAS_SIGNALING_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CROONQUIST_NRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for CROONQUIST_NRAS_SIGNALING_DN