Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetGHANDHI_BYSTANDER_IRRADIATION_UP
Enrichment Score (ES)0.80730534
Normalized Enrichment Score (NES)2.0359578
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: GHANDHI_BYSTANDER_IRRADIATION_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]04.9950.0433Yes
2IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]14.9940.0865Yes
3PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]44.9650.1294Yes
4DUSP5dual specificity phosphatase 5 [Source:HGNC Symbol;Acc:HGNC:3071]84.9410.1721Yes
5IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]104.9320.2148Yes
6NFKBIZNFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]234.7870.2559Yes
7DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]304.7380.2968Yes
8BCL2A1BCL2 related protein A1 [Source:HGNC Symbol;Acc:HGNC:991]644.3770.3338Yes
9SLC7A11solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]714.2860.3708Yes
10CREB5cAMP responsive element binding protein 5 [Source:HGNC Symbol;Acc:HGNC:16844]724.2710.4078Yes
11TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]1383.8420.4393Yes
12TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]1513.7290.4712Yes
13OSGIN2oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]1753.6100.5019Yes
14GCH1GTP cyclohydrolase 1 [Source:HGNC Symbol;Acc:HGNC:4193]1763.5890.5330Yes
15MT1Xmetallothionein 1X [Source:HGNC Symbol;Acc:HGNC:7405]1793.5680.5638Yes
16SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]2163.3380.5917Yes
17POU2F2POU class 2 homeobox 2 [Source:HGNC Symbol;Acc:HGNC:9213]2693.0830.6170Yes
18AHRaryl hydrocarbon receptor [Source:HGNC Symbol;Acc:HGNC:348]3532.7410.6385Yes
19SERPINB2serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]3962.6300.6601Yes
20CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]4862.3980.6785Yes
21ZC3H12Czinc finger CCCH-type containing 12C [Source:HGNC Symbol;Acc:HGNC:29362]6741.9980.6908Yes
22SAT1spermidine/spermine N1-acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10540]7311.9250.7059Yes
23CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]8021.8110.7197Yes
24GCLMglutamate-cysteine ligase modifier subunit [Source:HGNC Symbol;Acc:HGNC:4312]8181.7900.7348Yes
25TUT7terminal uridylyl transferase 7 [Source:HGNC Symbol;Acc:HGNC:25817]8731.7280.7483Yes
26IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]9671.6160.7598Yes
27SLC39A14solute carrier family 39 member 14 [Source:HGNC Symbol;Acc:HGNC:20858]10731.4970.7699Yes
28DNAJB4DnaJ heat shock protein family (Hsp40) member B4 [Source:HGNC Symbol;Acc:HGNC:14886]12811.3230.7758Yes
29NAMPTP1nicotinamide phosphoribosyltransferase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:17633]13561.2740.7848Yes
30NAMPTnicotinamide phosphoribosyltransferase [Source:HGNC Symbol;Acc:HGNC:30092]14061.2430.7942Yes
31PTGESprostaglandin E synthase [Source:HGNC Symbol;Acc:HGNC:9599]15091.1840.8017Yes
32MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]17171.0800.8055Yes
33GADD45Ggrowth arrest and DNA damage inducible gamma [Source:HGNC Symbol;Acc:HGNC:4097]19590.9640.8073Yes
34PPP4R3Bprotein phosphatase 4 regulatory subunit 3B [Source:HGNC Symbol;Acc:HGNC:29267]24030.7770.8021No
35C9orf72C9orf72-SMCR8 complex subunit [Source:HGNC Symbol;Acc:HGNC:28337]25930.7110.8031No
36INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]27660.6610.8042No
37MCTP1multiple C2 and transmembrane domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26183]30410.5940.8019No
38PLEK2pleckstrin 2 [Source:HGNC Symbol;Acc:HGNC:19238]32250.5460.8017No
39ZSWIM8zinc finger SWIM-type containing 8 [Source:HGNC Symbol;Acc:HGNC:23528]33260.5220.8035No
40MT1Emetallothionein 1E [Source:HGNC Symbol;Acc:HGNC:7397]34930.4830.8032No
41MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]45730.2620.7763No
42RGS9regulator of G protein signaling 9 [Source:HGNC Symbol;Acc:HGNC:10004]46020.2560.7778No
43BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]48530.2090.7728No
44SLC39A8solute carrier family 39 member 8 [Source:HGNC Symbol;Acc:HGNC:20862]48590.2070.7745No
45MT1Hmetallothionein 1H [Source:HGNC Symbol;Acc:HGNC:7400]49830.1810.7728No
46ATP6V1C1ATPase H+ transporting V1 subunit C1 [Source:HGNC Symbol;Acc:HGNC:856]54230.1080.7618No
47MCTP2multiple C2 and transmembrane domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25636]76000.0000.7030No
48POPDC3popeye domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17649]83490.0000.6828No
49SLC16A6P1SLC16A6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:48932]101390.0000.6345No
50B3GNT5UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:15684]104560.0000.6259No
51SLC6A15solute carrier family 6 member 15 [Source:HGNC Symbol;Acc:HGNC:13621]115430.0000.5966No
52PTGFRprostaglandin F receptor [Source:HGNC Symbol;Acc:HGNC:9600]115590.0000.5962No
53IL33interleukin 33 [Source:HGNC Symbol;Acc:HGNC:16028]136680.0000.5392No
54HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]142330.0000.5240No
55EPB41L4Berythrocyte membrane protein band 4.1 like 4B [Source:HGNC Symbol;Acc:HGNC:19818]148830.0000.5064No
56PRR7-AS1PRR7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27961]170410.0000.4482No
57SRSF12serine and arginine rich splicing factor 12 [Source:HGNC Symbol;Acc:HGNC:21220]174590.0000.4369No
58MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190320.0000.3944No
59CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]193710.0000.3853No
60CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]193800.0000.3851No
61CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]193820.0000.3850No
62CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193840.0000.3850No
63TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]197820.0000.3743No
64IFNEinterferon epsilon [Source:HGNC Symbol;Acc:HGNC:18163]207450.0000.3483No
65MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]208350.0000.3459No
66KYNUkynureninase [Source:HGNC Symbol;Acc:HGNC:6469]219320.0000.3163No
67TSLPthymic stromal lymphopoietin [Source:HGNC Symbol;Acc:HGNC:30743]220100.0000.3142No
68CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]230060.0000.2873No
69LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]235890.0000.2716No
70C2CD4BC2 calcium dependent domain containing 4B [Source:HGNC Symbol;Acc:HGNC:33628]245410.0000.2459No
71FGF2fibroblast growth factor 2 [Source:HGNC Symbol;Acc:HGNC:3676]252490.0000.2268No
72STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]272520.0000.1727No
73RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]28489-0.1760.1408No
74G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]29237-0.2870.1231No
75TESCtescalcin [Source:HGNC Symbol;Acc:HGNC:26065]29278-0.2930.1246No
76IRAK3interleukin 1 receptor associated kinase 3 [Source:HGNC Symbol;Acc:HGNC:17020]29344-0.3030.1254No
77MT1Bmetallothionein 1B [Source:HGNC Symbol;Acc:HGNC:7394]31168-0.5890.0813No
78PHEXphosphate regulating endopeptidase homolog X-linked [Source:HGNC Symbol;Acc:HGNC:8918]31276-0.6060.0836No
79GPR68G protein-coupled receptor 68 [Source:HGNC Symbol;Acc:HGNC:4519]32072-0.7730.0688No
80PLA2G4Aphospholipase A2 group IVA [Source:HGNC Symbol;Acc:HGNC:9035]32460-0.8780.0660No
81SLC16A6solute carrier family 16 member 6 [Source:HGNC Symbol;Acc:HGNC:10927]33609-1.2340.0457No
82RNF128ring finger protein 128 [Source:HGNC Symbol;Acc:HGNC:21153]35288-1.9880.0175No
83LRRC8Bleucine rich repeat containing 8 VRAC subunit B [Source:HGNC Symbol;Acc:HGNC:30692]36785-3.5950.0082No
Table: GSEA details [plain text format]



Fig 2: GHANDHI_BYSTANDER_IRRADIATION_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GHANDHI_BYSTANDER_IRRADIATION_UP: Random ES distribution   
Gene set null distribution of ES for GHANDHI_BYSTANDER_IRRADIATION_UP