Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetLEE_EARLY_T_LYMPHOCYTE_UP
Enrichment Score (ES)-0.8411826
Normalized Enrichment Score (NES)-1.7365776
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: LEE_EARLY_T_LYMPHOCYTE_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1AEBP1AE binding protein 1 [Source:HGNC Symbol;Acc:HGNC:303]8151.794-0.0132No
2RAPGEF5Rap guanine nucleotide exchange factor 5 [Source:HGNC Symbol;Acc:HGNC:16862]10251.549-0.0112No
3SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]14811.200-0.0175No
4SYKspleen associated tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11491]18301.024-0.0219No
5CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]24280.770-0.0342No
6CENPWcentromere protein W [Source:HGNC Symbol;Acc:HGNC:21488]31610.563-0.0512No
7CPVLcarboxypeptidase vitellogenic like [Source:HGNC Symbol;Acc:HGNC:14399]32300.545-0.0504No
8GALNT7polypeptide N-acetylgalactosaminyltransferase 7 [Source:HGNC Symbol;Acc:HGNC:4129]39460.389-0.0678No
9FAIMFas apoptotic inhibitory molecule [Source:HGNC Symbol;Acc:HGNC:18703]43540.306-0.0773No
10LDLRAD4low density lipoprotein receptor class A domain containing 4 [Source:HGNC Symbol;Acc:HGNC:1224]44920.281-0.0796No
11PALM2AKAP2PALM2 and AKAP2 fusion [Source:HGNC Symbol;Acc:HGNC:33529]52480.141-0.0993No
12DNTTDNA nucleotidylexotransferase [Source:HGNC Symbol;Acc:HGNC:2983]56560.060-0.1100No
13GSE1Gse1 coiled-coil protein [Source:HGNC Symbol;Acc:HGNC:28979]59590.003-0.1182No
14MIR646HGMIR646 host gene [Source:HGNC Symbol;Acc:HGNC:27659]76880.000-0.1649No
15HHIPhedgehog interacting protein [Source:HGNC Symbol;Acc:HGNC:14866]77610.000-0.1668No
16TNFRSF21TNF receptor superfamily member 21 [Source:HGNC Symbol;Acc:HGNC:13469]88980.000-0.1976No
17PON1paraoxonase 1 [Source:HGNC Symbol;Acc:HGNC:9204]105280.000-0.2416No
18RAG1recombination activating 1 [Source:HGNC Symbol;Acc:HGNC:9831]123600.000-0.2911No
19SCRN1secernin 1 [Source:HGNC Symbol;Acc:HGNC:22192]139260.000-0.3334No
20MZB1marginal zone B and B1 cell specific protein [Source:HGNC Symbol;Acc:HGNC:30125]145260.000-0.3496No
21ARPP21cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]153540.000-0.3720No
22PALLDpalladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]166160.000-0.4061No
23TSHRthyroid stimulating hormone receptor [Source:HGNC Symbol;Acc:HGNC:12373]219720.000-0.5509No
24FAM72Cfamily with sequence similarity 72 member C [Source:HGNC Symbol;Acc:HGNC:30602]222690.000-0.5589No
25CD1ECD1e molecule [Source:HGNC Symbol;Acc:HGNC:1638]228850.000-0.5755No
26CD1BCD1b molecule [Source:HGNC Symbol;Acc:HGNC:1635]228880.000-0.5756No
27CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]228890.000-0.5756No
28CD99CD99 molecule (Xg blood group) [Source:HGNC Symbol;Acc:HGNC:7082]230300.000-0.5793No
29CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]239560.000-0.6044No
30NLGN4Xneuroligin 4 X-linked [Source:HGNC Symbol;Acc:HGNC:14287]253390.000-0.6417No
31GGHgamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]27673-0.057-0.7045No
32MYBMYB proto-oncogene, transcription factor [Source:HGNC Symbol;Acc:HGNC:7545]28441-0.170-0.7244No
33CDC25Acell division cycle 25A [Source:HGNC Symbol;Acc:HGNC:1725]29004-0.250-0.7384No
34MPP1membrane palmitoylated protein 1 [Source:HGNC Symbol;Acc:HGNC:7219]29608-0.342-0.7530No
35TMSB15Athymosin beta 15a [Source:HGNC Symbol;Acc:HGNC:30744]29611-0.343-0.7514No
36GNA15G protein subunit alpha 15 [Source:HGNC Symbol;Acc:HGNC:4383]29932-0.388-0.7581No
37CRNDEcolorectal neoplasia differentially expressed [Source:HGNC Symbol;Acc:HGNC:37078]30040-0.404-0.7590No
38LETM1leucine zipper and EF-hand containing transmembrane protein 1 [Source:HGNC Symbol;Acc:HGNC:6556]30394-0.458-0.7663No
39PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]30719-0.514-0.7725No
40GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]32393-0.863-0.8135No
41TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32418-0.869-0.8098No
42RCAN1regulator of calcineurin 1 [Source:HGNC Symbol;Acc:HGNC:3040]33579-1.222-0.8351Yes
43TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]33741-1.280-0.8332Yes
44CEP128centrosomal protein 128 [Source:HGNC Symbol;Acc:HGNC:20359]33858-1.321-0.8298Yes
45MCM10minichromosome maintenance 10 replication initiation factor [Source:HGNC Symbol;Acc:HGNC:18043]33916-1.342-0.8247Yes
46DIAPH3diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]33930-1.347-0.8184Yes
47RUFY3RUN and FYVE domain containing 3 [Source:HGNC Symbol;Acc:HGNC:30285]34151-1.429-0.8173Yes
48CENPUcentromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]34297-1.486-0.8138Yes
49CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]34381-1.518-0.8086Yes
50ADAadenosine deaminase [Source:HGNC Symbol;Acc:HGNC:186]34587-1.599-0.8062Yes
51PRR11proline rich 11 [Source:HGNC Symbol;Acc:HGNC:25619]34678-1.641-0.8005Yes
52MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34684-1.643-0.7925Yes
53NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]34697-1.649-0.7847Yes
54PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34837-1.712-0.7800Yes
55FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35131-1.888-0.7786Yes
56OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]35217-1.946-0.7713Yes
57RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]35318-2.003-0.7641Yes
58AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35380-2.050-0.7556Yes
59E2F7E2F transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:23820]35425-2.080-0.7465Yes
60CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]35605-2.200-0.7405Yes
61GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35776-2.350-0.7334Yes
62CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35813-2.385-0.7226Yes
63DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35981-2.530-0.7146Yes
64PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]36068-2.625-0.7040Yes
65MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36125-2.680-0.6922Yes
66TUBBtubulin beta class I [Source:HGNC Symbol;Acc:HGNC:20778]36146-2.702-0.6794Yes
67LRR1leucine rich repeat protein 1 [Source:HGNC Symbol;Acc:HGNC:19742]36164-2.720-0.6664Yes
68HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36191-2.745-0.6536Yes
69SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36224-2.775-0.6407Yes
70BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36239-2.787-0.6273Yes
71KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36255-2.798-0.6139Yes
72ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36303-2.848-0.6011Yes
73NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]36342-2.919-0.5877Yes
74MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36350-2.926-0.5734Yes
75UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36357-2.930-0.5591Yes
76CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36367-2.940-0.5448Yes
77KNL1kinetochore scaffold 1 [Source:HGNC Symbol;Acc:HGNC:24054]36396-2.980-0.5308Yes
78UHRF1ubiquitin like with PHD and ring finger domains 1 [Source:HGNC Symbol;Acc:HGNC:12556]36415-3.003-0.5164Yes
79DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36426-3.017-0.5018Yes
80MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36439-3.036-0.4871Yes
81TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36461-3.062-0.4725Yes
82UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36476-3.083-0.4577Yes
83CEP70centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]36618-3.301-0.4452Yes
84KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36655-3.354-0.4295Yes
85CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]36656-3.362-0.4129Yes
86CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36664-3.374-0.3964Yes
87NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36691-3.417-0.3802Yes
88DSCC1DNA replication and sister chromatid cohesion 1 [Source:HGNC Symbol;Acc:HGNC:24453]36699-3.424-0.3635Yes
89KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36709-3.440-0.3467Yes
90KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36710-3.442-0.3297Yes
91KIF15kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]36755-3.524-0.3135Yes
92BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36780-3.580-0.2964Yes
93HMGB3high mobility group box 3 [Source:HGNC Symbol;Acc:HGNC:5004]36784-3.594-0.2787Yes
94NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36802-3.632-0.2612Yes
95KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36808-3.649-0.2433Yes
96NEIL3nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]36811-3.657-0.2253Yes
97PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36817-3.672-0.2073Yes
98CXXC5CXXC finger protein 5 [Source:HGNC Symbol;Acc:HGNC:26943]36818-3.673-0.1891Yes
99E2F2E2F transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:3114]36835-3.729-0.1711Yes
100NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36841-3.749-0.1527Yes
101BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36873-3.821-0.1347Yes
102ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36920-3.941-0.1164Yes
103CEP55centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]36930-3.967-0.0971Yes
104RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36939-3.976-0.0776Yes
105E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36953-4.019-0.0581Yes
106TFDP2transcription factor Dp-2 [Source:HGNC Symbol;Acc:HGNC:11751]36962-4.070-0.0382Yes
107NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36994-4.180-0.0184Yes
108TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]37006-4.2360.0023Yes
Table: GSEA details [plain text format]



Fig 2: LEE_EARLY_T_LYMPHOCYTE_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: LEE_EARLY_T_LYMPHOCYTE_UP: Random ES distribution   
Gene set null distribution of ES for LEE_EARLY_T_LYMPHOCYTE_UP