Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | LIANG_SILENCED_BY_METHYLATION_2 |
| Enrichment Score (ES) | 0.8722932 |
| Normalized Enrichment Score (NES) | 2.0560265 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.0 |
| FWER p-Value | 0.0 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | PTGS2 | prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605] | 4 | 4.965 | 0.0681 | Yes |
| 2 | IFIT1 | interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407] | 17 | 4.863 | 0.1345 | Yes |
| 3 | MX1 | MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532] | 20 | 4.828 | 0.2008 | Yes |
| 4 | MX2 | MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533] | 29 | 4.760 | 0.2659 | Yes |
| 5 | IFI44 | interferon induced protein 44 [Source:HGNC Symbol;Acc:HGNC:16938] | 47 | 4.510 | 0.3274 | Yes |
| 6 | IRF7 | interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122] | 54 | 4.451 | 0.3883 | Yes |
| 7 | IFIT2 | interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409] | 103 | 4.026 | 0.4423 | Yes |
| 8 | CCL5 | C-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10632] | 127 | 3.902 | 0.4953 | Yes |
| 9 | STAT1 | signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362] | 145 | 3.779 | 0.5467 | Yes |
| 10 | TNFAIP3 | TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896] | 151 | 3.729 | 0.5978 | Yes |
| 11 | OAS1 | 2'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086] | 154 | 3.699 | 0.6485 | Yes |
| 12 | SOD2 | superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180] | 216 | 3.338 | 0.6927 | Yes |
| 13 | OAS2 | 2'-5'-oligoadenylate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:8087] | 276 | 3.036 | 0.7328 | Yes |
| 14 | SERPINB2 | serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584] | 396 | 2.630 | 0.7657 | Yes |
| 15 | SAA1 | serum amyloid A1 [Source:HGNC Symbol;Acc:HGNC:10513] | 425 | 2.542 | 0.7999 | Yes |
| 16 | CXCL2 | C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603] | 486 | 2.398 | 0.8312 | Yes |
| 17 | IL13RA2 | interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975] | 967 | 1.616 | 0.8404 | Yes |
| 18 | IFIT3 | interferon induced protein with tetratricopeptide repeats 3 [Source:HGNC Symbol;Acc:HGNC:5411] | 1412 | 1.240 | 0.8454 | Yes |
| 19 | C3 | complement C3 [Source:HGNC Symbol;Acc:HGNC:1318] | 1539 | 1.177 | 0.8582 | Yes |
| 20 | HBEGF | heparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059] | 1600 | 1.145 | 0.8723 | Yes |
| 21 | STX3 | syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438] | 2218 | 0.849 | 0.8673 | No |
| 22 | INHBA | inhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066] | 2766 | 0.661 | 0.8616 | No |
| 23 | IL6 | interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018] | 2890 | 0.626 | 0.8669 | No |
| 24 | UCHL1 | ubiquitin C-terminal hydrolase L1 [Source:HGNC Symbol;Acc:HGNC:12513] | 3889 | 0.403 | 0.8455 | No |
| 25 | DHRS2 | dehydrogenase/reductase 2 [Source:HGNC Symbol;Acc:HGNC:18349] | 3984 | 0.377 | 0.8481 | No |
| 26 | THBD | thrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784] | 5202 | 0.152 | 0.8173 | No |
| 27 | CCL20 | C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619] | 6046 | 0.000 | 0.7945 | No |
| 28 | AREG | amphiregulin [Source:HGNC Symbol;Acc:HGNC:651] | 6943 | 0.000 | 0.7704 | No |
| 29 | SLPI | secretory leukocyte peptidase inhibitor [Source:HGNC Symbol;Acc:HGNC:11092] | 8943 | 0.000 | 0.7164 | No |
| 30 | LCN2 | lipocalin 2 [Source:HGNC Symbol;Acc:HGNC:6526] | 10637 | 0.000 | 0.6707 | No |
| 31 | TNFSF10 | TNF superfamily member 10 [Source:HGNC Symbol;Acc:HGNC:11925] | 12274 | 0.000 | 0.6265 | No |
| 32 | BIK | BCL2 interacting killer [Source:HGNC Symbol;Acc:HGNC:1051] | 15486 | 0.000 | 0.5398 | No |
| 33 | H19 | H19 imprinted maternally expressed transcript [Source:HGNC Symbol;Acc:HGNC:4713] | 17064 | 0.000 | 0.4972 | No |
| 34 | ICAM1 | intercellular adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5344] | 18189 | 0.000 | 0.4668 | No |
| 35 | GAGE1 | G antigen 1 [Source:HGNC Symbol;Acc:HGNC:4098] | 18722 | 0.000 | 0.4525 | No |
| 36 | MMP1 | matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155] | 19032 | 0.000 | 0.4441 | No |
| 37 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19366 | 0.000 | 0.4351 | No |
| 38 | CXCL5 | C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642] | 19384 | 0.000 | 0.4347 | No |
| 39 | PI3 | peptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:8947] | 19932 | 0.000 | 0.4199 | No |
| 40 | IFI6 | interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054] | 20640 | 0.000 | 0.4008 | No |
| 41 | H2AC18 | H2A clustered histone 18 [Source:HGNC Symbol;Acc:HGNC:4736] | 21603 | 0.000 | 0.3748 | No |
| 42 | KRT17 | keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427] | 21877 | 0.000 | 0.3675 | No |
| 43 | CTAG1B | cancer/testis antigen 1B [Source:HGNC Symbol;Acc:HGNC:2491] | 22278 | 0.000 | 0.3567 | No |
| 44 | IFI44L | interferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817] | 23524 | 0.000 | 0.3230 | No |
| 45 | CSF2 | colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434] | 24383 | 0.000 | 0.2999 | No |
| 46 | NT5E | 5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021] | 24597 | 0.000 | 0.2941 | No |
| 47 | MAGEA12 | MAGE family member A12 [Source:HGNC Symbol;Acc:HGNC:6799] | 26380 | 0.000 | 0.2460 | No |
| 48 | MAGEA2 | MAGE family member A2 [Source:HGNC Symbol;Acc:HGNC:6800] | 26535 | 0.000 | 0.2419 | No |
| 49 | MAGEA3 | MAGE family member A3 [Source:HGNC Symbol;Acc:HGNC:6801] | 26540 | 0.000 | 0.2417 | No |
| 50 | MAGEA4 | MAGE family member A4 [Source:HGNC Symbol;Acc:HGNC:6802] | 26542 | 0.000 | 0.2417 | No |
| 51 | SSX2 | SSX family member 2 [Source:HGNC Symbol;Acc:HGNC:11336] | 27056 | 0.000 | 0.2279 | No |
| 52 | XAF1 | XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932] | 27136 | 0.000 | 0.2257 | No |
| 53 | STC1 | stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373] | 27252 | 0.000 | 0.2226 | No |
| 54 | SP100 | SP100 nuclear antigen [Source:HGNC Symbol;Acc:HGNC:11206] | 27873 | -0.086 | 0.2071 | No |
| 55 | C1S | complement C1s [Source:HGNC Symbol;Acc:HGNC:1247] | 30895 | -0.541 | 0.1329 | No |
| 56 | S100A4 | S100 calcium binding protein A4 [Source:HGNC Symbol;Acc:HGNC:10494] | 31694 | -0.688 | 0.1208 | No |
| 57 | H2BC6 | H2B clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4753] | 31991 | -0.752 | 0.1232 | No |
| 58 | H2AC6 | H2A clustered histone 6 [Source:HGNC Symbol;Acc:HGNC:4733] | 33081 | -1.056 | 0.1083 | No |
