Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetWHITEFORD_PEDIATRIC_CANCER_MARKERS
Enrichment Score (ES)-0.8013507
Normalized Enrichment Score (NES)-1.6760511
Nominal p-value0.0
FDR q-value7.976887E-4
FWER p-Value0.014
Table: GSEA Results Summary



Fig 1: Enrichment plot: WHITEFORD_PEDIATRIC_CANCER_MARKERS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ODC1ornithine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:8109]344.6880.0200No
2BCAT1branched chain amino acid transaminase 1 [Source:HGNC Symbol;Acc:HGNC:976]4002.6100.0218No
3NME1NME/NM23 nucleoside diphosphate kinase 1 [Source:HGNC Symbol;Acc:HGNC:7849]7931.8310.0194No
4MLLT11MLLT11 transcription factor 7 cofactor [Source:HGNC Symbol;Acc:HGNC:16997]15441.1740.0043No
5CDK6cyclin dependent kinase 6 [Source:HGNC Symbol;Acc:HGNC:1777]21700.867-0.0087No
6CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]24280.770-0.0122No
7EIF4EBP1eukaryotic translation initiation factor 4E binding protein 1 [Source:HGNC Symbol;Acc:HGNC:3288]35410.471-0.0402No
8EIF4A1eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:HGNC:3282]36870.441-0.0421No
9JPT1Jupiter microtubule associated homolog 1 [Source:HGNC Symbol;Acc:HGNC:14569]43360.310-0.0583No
10CCNT1cyclin T1 [Source:HGNC Symbol;Acc:HGNC:1599]52880.132-0.0834No
11ILF2interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]58520.021-0.0986No
12GPX7glutathione peroxidase 7 [Source:HGNC Symbol;Acc:HGNC:4559]92020.000-0.1891No
13H4C3H4 clustered histone 3 [Source:HGNC Symbol;Acc:HGNC:4787]98740.000-0.2073No
14KLKB1kallikrein B1 [Source:HGNC Symbol;Acc:HGNC:6371]108460.000-0.2335No
15TMEFF1transmembrane protein with EGF like and two follistatin like domains 1 [Source:HGNC Symbol;Acc:HGNC:11866]154780.000-0.3588No
16CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]166480.000-0.3904No
17TWIST1twist family bHLH transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:12428]171740.000-0.4046No
18GABRB2gamma-aminobutyric acid type A receptor subunit beta2 [Source:HGNC Symbol;Acc:HGNC:4082]198550.000-0.4771No
19SNORD22small nucleolar RNA, C/D box 22 [Source:HGNC Symbol;Acc:HGNC:10145]222440.000-0.5417No
20CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]239560.000-0.5880No
21SOX4SRY-box transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:11200]259990.000-0.6432No
22ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]260190.000-0.6437No
23GGHgamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]27673-0.057-0.6881No
24ZNF300zinc finger protein 300 [Source:HGNC Symbol;Acc:HGNC:13091]27914-0.091-0.6942No
25MFN2mitofusin 2 [Source:HGNC Symbol;Acc:HGNC:16877]28235-0.139-0.7023No
26PSAT1phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]28687-0.200-0.7136No
27CDC25Acell division cycle 25A [Source:HGNC Symbol;Acc:HGNC:1725]29004-0.250-0.7210No
28DHFRdihydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:2861]29048-0.257-0.7210No
29ADGRL3adhesion G protein-coupled receptor L3 [Source:HGNC Symbol;Acc:HGNC:20974]29234-0.286-0.7247No
30PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]30719-0.514-0.7626No
31RRP1ribosomal RNA processing 1 [Source:HGNC Symbol;Acc:HGNC:18785]30965-0.552-0.7667No
32ENO1enolase 1 [Source:HGNC Symbol;Acc:HGNC:3350]31071-0.571-0.7670No
33SNRNP200small nuclear ribonucleoprotein U5 subunit 200 [Source:HGNC Symbol;Acc:HGNC:30859]31777-0.704-0.7830No
34ZMYM2zinc finger MYM-type containing 2 [Source:HGNC Symbol;Acc:HGNC:12989]31846-0.714-0.7816No
35ILF3interleukin enhancer binding factor 3 [Source:HGNC Symbol;Acc:HGNC:6038]31856-0.718-0.7786No
36POLQDNA polymerase theta [Source:HGNC Symbol;Acc:HGNC:9186]31932-0.738-0.7774No
37MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]32109-0.782-0.7786No
38TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32418-0.869-0.7831No
39PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32753-0.958-0.7879No
40RCC2regulator of chromosome condensation 2 [Source:HGNC Symbol;Acc:HGNC:30297]33121-1.069-0.7930No
41RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33208-1.098-0.7904No
42LMNB2lamin B2 [Source:HGNC Symbol;Acc:HGNC:6638]33381-1.154-0.7899No
43RECQL4RecQ like helicase 4 [Source:HGNC Symbol;Acc:HGNC:9949]33676-1.259-0.7923No
44DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]34013-1.377-0.7952Yes
45ADCY3adenylate cyclase 3 [Source:HGNC Symbol;Acc:HGNC:234]34056-1.390-0.7901Yes
46CENPUcentromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]34297-1.486-0.7900Yes
47KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]34335-1.502-0.7843Yes
48CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]34381-1.518-0.7787Yes
49GAPDHglyceraldehyde-3-phosphate dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4141]34513-1.567-0.7753Yes
50ZNF367zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]34624-1.612-0.7710Yes
51CDC45cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]34638-1.617-0.7642Yes
52MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34684-1.643-0.7581Yes
53NSD2nuclear receptor binding SET domain protein 2 [Source:HGNC Symbol;Acc:HGNC:12766]34697-1.649-0.7510Yes
54PON3paraoxonase 3 [Source:HGNC Symbol;Acc:HGNC:9206]34872-1.734-0.7480Yes
55CDK4cyclin dependent kinase 4 [Source:HGNC Symbol;Acc:HGNC:1773]34916-1.761-0.7413Yes
56PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]35101-1.865-0.7379Yes
57MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35138-1.892-0.7305Yes
58NUDT1nudix hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:8048]35141-1.895-0.7221Yes
59GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35192-1.927-0.7148Yes
60CCDC34coiled-coil domain containing 34 [Source:HGNC Symbol;Acc:HGNC:25079]35240-1.957-0.7073Yes
61NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35290-1.989-0.6998Yes
62CENPNcentromere protein N [Source:HGNC Symbol;Acc:HGNC:30873]35359-2.031-0.6926Yes
63AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35380-2.050-0.6839Yes
64CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]35407-2.067-0.6754Yes
65TUBA1Atubulin alpha 1a [Source:HGNC Symbol;Acc:HGNC:20766]35480-2.112-0.6679Yes
66HAUS1HAUS augmin like complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:25174]35501-2.124-0.6590Yes
67RNASEH2Aribonuclease H2 subunit A [Source:HGNC Symbol;Acc:HGNC:18518]35592-2.193-0.6516Yes
68CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]35605-2.200-0.6421Yes
69MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35807-2.374-0.6370Yes
70RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35830-2.402-0.6269Yes
71SLC25A40solute carrier family 25 member 40 [Source:HGNC Symbol;Acc:HGNC:29680]35921-2.477-0.6182Yes
72MEX3Bmex-3 RNA binding family member B [Source:HGNC Symbol;Acc:HGNC:25297]35927-2.480-0.6073Yes
73TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35941-2.490-0.5965Yes
74DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35981-2.530-0.5863Yes
75PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]36068-2.625-0.5769Yes
76CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36076-2.633-0.5653Yes
77CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]36083-2.637-0.5537Yes
78MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36125-2.680-0.5429Yes
79CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]36138-2.694-0.5312Yes
80ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36139-2.694-0.5191Yes
81SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]36199-2.753-0.5084Yes
82E2F1E2F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3113]36208-2.759-0.4963Yes
83MYCNMYCN proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7559]36233-2.784-0.4846Yes
84ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]36251-2.795-0.4725Yes
85STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36260-2.803-0.4602Yes
86DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]36273-2.821-0.4480Yes
87ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36303-2.848-0.4360Yes
88UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36357-2.930-0.4244Yes
89POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]36361-2.936-0.4114Yes
90CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36367-2.940-0.3984Yes
91UHRF1ubiquitin like with PHD and ring finger domains 1 [Source:HGNC Symbol;Acc:HGNC:12556]36415-3.003-0.3862Yes
92CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36421-3.011-0.3729Yes
93MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36439-3.036-0.3598Yes
94H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36457-3.057-0.3466Yes
95TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36461-3.062-0.3331Yes
96UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36476-3.083-0.3197Yes
97MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36508-3.121-0.3066Yes
98PAFAH1B3platelet activating factor acetylhydrolase 1b catalytic subunit 3 [Source:HGNC Symbol;Acc:HGNC:8576]36544-3.185-0.2933Yes
99NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36546-3.187-0.2791Yes
100MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36575-3.228-0.2654Yes
101TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]36629-3.321-0.2521Yes
102DNMT1DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]36635-3.330-0.2373Yes
103CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]36656-3.362-0.2229Yes
104CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36660-3.369-0.2079Yes
105NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36691-3.417-0.1934Yes
106KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36709-3.440-0.1785Yes
107BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36780-3.580-0.1645Yes
108HMGB3high mobility group box 3 [Source:HGNC Symbol;Acc:HGNC:5004]36784-3.594-0.1485Yes
109NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36802-3.632-0.1327Yes
110KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36808-3.649-0.1166Yes
111CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]36812-3.660-0.1003Yes
112PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36817-3.672-0.0840Yes
113NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]36841-3.749-0.0679Yes
114BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36873-3.821-0.0517Yes
115RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36939-3.976-0.0357Yes
116TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]37006-4.236-0.0186Yes
117TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37070-4.6660.0005Yes
Table: GSEA details [plain text format]



Fig 2: WHITEFORD_PEDIATRIC_CANCER_MARKERS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: WHITEFORD_PEDIATRIC_CANCER_MARKERS: Random ES distribution   
Gene set null distribution of ES for WHITEFORD_PEDIATRIC_CANCER_MARKERS