Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetSGCGSSAAA_E2F1DP2_01
Enrichment Score (ES)-0.63158494
Normalized Enrichment Score (NES)-1.3456054
Nominal p-value0.0021505377
FDR q-value1.0
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: SGCGSSAAA_E2F1DP2_01   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL4I1interleukin 4 induced 1 [Source:HGNC Symbol;Acc:HGNC:19094]484.4990.0187No
2MYCMYC proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7553]614.4050.0379No
3PIM1Pim-1 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:8986]1113.9660.0542No
4ID3inhibitor of DNA binding 3, HLH protein [Source:HGNC Symbol;Acc:HGNC:5362]1233.9210.0713No
5JADE2jade family PHD finger 2 [Source:HGNC Symbol;Acc:HGNC:22984]2623.1240.0815No
6ATF5activating transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:790]6801.9850.0790No
7POLE4DNA polymerase epsilon 4, accessory subunit [Source:HGNC Symbol;Acc:HGNC:18755]7511.8880.0855No
8PLAGL1PLAG1 like zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:9046]10831.4810.0831No
9DCKdeoxycytidine kinase [Source:HGNC Symbol;Acc:HGNC:2704]12701.3330.0840No
10NR6A1nuclear receptor subfamily 6 group A member 1 [Source:HGNC Symbol;Acc:HGNC:7985]16461.1180.0788No
11E2F3E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]17531.0570.0806No
12HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]17791.0480.0846No
13RANBP1RAN binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9847]20170.9360.0823No
14SYNCRIPsynaptotagmin binding cytoplasmic RNA interacting protein [Source:HGNC Symbol;Acc:HGNC:16918]20710.9130.0849No
15TRIM39tripartite motif containing 39 [Source:HGNC Symbol;Acc:HGNC:10065]20720.9130.0890No
16MTF2metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:29535]21210.8880.0916No
17SRSF7serine and arginine rich splicing factor 7 [Source:HGNC Symbol;Acc:HGNC:10789]21380.8810.0951No
18GON7GON7 subunit of KEOPS complex [Source:HGNC Symbol;Acc:HGNC:20356]24380.7660.0904No
19RPS20ribosomal protein S20 [Source:HGNC Symbol;Acc:HGNC:10405]26200.7030.0886No
20SRSF1serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780]28630.6320.0849No
21AP1S1adaptor related protein complex 1 subunit sigma 1 [Source:HGNC Symbol;Acc:HGNC:559]30950.5790.0812No
22TRA2Btransformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781]34320.5000.0743No
23ZNF644zinc finger protein 644 [Source:HGNC Symbol;Acc:HGNC:29222]37260.4340.0683No
24EEDembryonic ectoderm development [Source:HGNC Symbol;Acc:HGNC:3188]42110.3370.0567No
25STAG2stromal antigen 2 [Source:HGNC Symbol;Acc:HGNC:11355]46520.2430.0459No
26NCLnucleolin [Source:HGNC Symbol;Acc:HGNC:7667]47470.2300.0443No
27NOLC1nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:15608]49880.1800.0386No
28PHF5APHD finger protein 5A [Source:HGNC Symbol;Acc:HGNC:18000]54470.1020.0267No
29USP37ubiquitin specific peptidase 37 [Source:HGNC Symbol;Acc:HGNC:20063]54830.0970.0262No
30EMSYEMSY transcriptional repressor, BRCA2 interacting [Source:HGNC Symbol;Acc:HGNC:18071]54850.0960.0266No
31HNRNPDheterogeneous nuclear ribonucleoprotein D [Source:HGNC Symbol;Acc:HGNC:5036]55220.0860.0260No
32MCMBPminichromosome maintenance complex binding protein [Source:HGNC Symbol;Acc:HGNC:25782]56770.0570.0221No
33FANCCFA complementation group C [Source:HGNC Symbol;Acc:HGNC:3584]57610.0420.0200No
34SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]57820.0360.0196No
35LUC7L3LUC7 like 3 pre-mRNA splicing factor [Source:HGNC Symbol;Acc:HGNC:24309]58370.0230.0183No
36STK35serine/threonine kinase 35 [Source:HGNC Symbol;Acc:HGNC:16254]59050.0100.0165No
37GPRC5BG protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]69560.000-0.0119No
38KCNS2potassium voltage-gated channel modifier subfamily S member 2 [Source:HGNC Symbol;Acc:HGNC:6301]96230.000-0.0841No
39PODNpodocan [Source:HGNC Symbol;Acc:HGNC:23174]104700.000-0.1071No
40WBP2NLWBP2 N-terminal like [Source:HGNC Symbol;Acc:HGNC:28389]127090.000-0.1677No
41GLRA3glycine receptor alpha 3 [Source:HGNC Symbol;Acc:HGNC:4328]127770.000-0.1695No
42TMEM187transmembrane protein 187 [Source:HGNC Symbol;Acc:HGNC:13705]130390.000-0.1766No
43TMEM108transmembrane protein 108 [Source:HGNC Symbol;Acc:HGNC:28451]133400.000-0.1847No
44GATA1GATA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4170]133770.000-0.1857No
45HOXC10homeobox C10 [Source:HGNC Symbol;Acc:HGNC:5122]133930.000-0.1861No
46CDC20Bcell division cycle 20B [Source:HGNC Symbol;Acc:HGNC:24222]133980.000-0.1862No
47EFNA5ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225]141510.000-0.2065No
48SYNGR4synaptogyrin 4 [Source:HGNC Symbol;Acc:HGNC:11502]152990.000-0.2376No
49PCSK1proprotein convertase subtilisin/kexin type 1 [Source:HGNC Symbol;Acc:HGNC:8743]161890.000-0.2617No
50ILF3-DTILF3 divergent transcript [Source:HGNC Symbol;Acc:HGNC:27115]174850.000-0.2968No
51NRKNik related kinase [Source:HGNC Symbol;Acc:HGNC:25391]193020.000-0.3459No
52GABRB3gamma-aminobutyric acid type A receptor subunit beta3 [Source:HGNC Symbol;Acc:HGNC:4083]198540.000-0.3609No
53ADAMTS2ADAM metallopeptidase with thrombospondin type 1 motif 2 [Source:HGNC Symbol;Acc:HGNC:218]199480.000-0.3634No
54RETret proto-oncogene [Source:HGNC Symbol;Acc:HGNC:9967]204050.000-0.3757No
55THAP8THAP domain containing 8 [Source:HGNC Symbol;Acc:HGNC:23191]213620.000-0.4016No
56ARHGAP6Rho GTPase activating protein 6 [Source:HGNC Symbol;Acc:HGNC:676]239280.000-0.4711No
57H2BC12H2B clustered histone 12 [Source:HGNC Symbol;Acc:HGNC:13954]269420.000-0.5527No
58FMO4flavin containing dimethylaniline monoxygenase 4 [Source:HGNC Symbol;Acc:HGNC:3772]270230.000-0.5549No
59VCANversican [Source:HGNC Symbol;Acc:HGNC:2464]27953-0.096-0.5796No
60PRPS1phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:9462]28383-0.162-0.5905No
61TYRO3TYRO3 protein tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:12446]28649-0.195-0.5968No
62HCN3hyperpolarization activated cyclic nucleotide gated potassium channel 3 [Source:HGNC Symbol;Acc:HGNC:19183]28734-0.210-0.5981No
63CDC25Acell division cycle 25A [Source:HGNC Symbol;Acc:HGNC:1725]29004-0.250-0.6043No
64MEPCEmethylphosphate capping enzyme [Source:HGNC Symbol;Acc:HGNC:20247]29039-0.256-0.6041No
65FKBP5FKBP prolyl isomerase 5 [Source:HGNC Symbol;Acc:HGNC:3721]29460-0.321-0.6141No
66MYH10myosin heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:7568]29812-0.369-0.6219No
67NIPBLNIPBL cohesin loading factor [Source:HGNC Symbol;Acc:HGNC:28862]29868-0.378-0.6217No
68PRPF4Bpre-mRNA processing factor 4B [Source:HGNC Symbol;Acc:HGNC:17346]29907-0.384-0.6211No
69PAN2poly(A) specific ribonuclease subunit PAN2 [Source:HGNC Symbol;Acc:HGNC:20074]30066-0.408-0.6235No
70TAOK2TAO kinase 2 [Source:HGNC Symbol;Acc:HGNC:16835]30132-0.418-0.6234No
71RMI2RecQ mediated genome instability 2 [Source:HGNC Symbol;Acc:HGNC:28349]30156-0.420-0.6222No
72YBX2Y-box binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17948]30353-0.453-0.6255No
73HNRNPUL1heterogeneous nuclear ribonucleoprotein U like 1 [Source:HGNC Symbol;Acc:HGNC:17011]30451-0.467-0.6260No
74NABP2nucleic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:28412]30477-0.473-0.6246No
75NFATC2IPnuclear factor of activated T cells 2 interacting protein [Source:HGNC Symbol;Acc:HGNC:25906]30570-0.488-0.6249No
76ACO2aconitase 2 [Source:HGNC Symbol;Acc:HGNC:118]30594-0.493-0.6234No
77CASP8AP2caspase 8 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1510]30764-0.520-0.6256No
78ING3inhibitor of growth family member 3 [Source:HGNC Symbol;Acc:HGNC:14587]30877-0.538-0.6263No
79DCTPP1dCTP pyrophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:28777]30896-0.541-0.6244No
80PTMAprothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]31016-0.561-0.6251No
81ACBD6acyl-CoA binding domain containing 6 [Source:HGNC Symbol;Acc:HGNC:23339]31025-0.563-0.6228No
82MRPL40mitochondrial ribosomal protein L40 [Source:HGNC Symbol;Acc:HGNC:14491]31095-0.575-0.6221No
83CAND1cullin associated and neddylation dissociated 1 [Source:HGNC Symbol;Acc:HGNC:30688]31131-0.584-0.6205No
84H4C1H4 clustered histone 1 [Source:HGNC Symbol;Acc:HGNC:4781]31151-0.587-0.6184No
85RIBC1RIB43A domain with coiled-coils 1 [Source:HGNC Symbol;Acc:HGNC:26537]31200-0.596-0.6170No
86AK2adenylate kinase 2 [Source:HGNC Symbol;Acc:HGNC:362]31265-0.605-0.6161No
87KIAA0825KIAA0825 [Source:HGNC Symbol;Acc:HGNC:28532]31307-0.612-0.6145No
88HIRAhistone cell cycle regulator [Source:HGNC Symbol;Acc:HGNC:4916]31549-0.661-0.6181No
89CNOT9CCR4-NOT transcription complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:10445]31580-0.666-0.6159No
90ILF3interleukin enhancer binding factor 3 [Source:HGNC Symbol;Acc:HGNC:6038]31856-0.718-0.6202No
91FANCGFA complementation group G [Source:HGNC Symbol;Acc:HGNC:3588]31907-0.732-0.6183No
92KBTBD7kelch repeat and BTB domain containing 7 [Source:HGNC Symbol;Acc:HGNC:25266]31908-0.732-0.6150No
93CTDSPL2CTD small phosphatase like 2 [Source:HGNC Symbol;Acc:HGNC:26936]31967-0.746-0.6133No
94ZNF687zinc finger protein 687 [Source:HGNC Symbol;Acc:HGNC:29277]32591-0.913-0.6261No
95PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32753-0.958-0.6262No
96RAVER1ribonucleoprotein, PTB binding 1 [Source:HGNC Symbol;Acc:HGNC:30296]32952-1.023-0.6270Yes
97UGGT1UDP-glucose glycoprotein glucosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15663]33090-1.060-0.6260Yes
98NUP62nucleoporin 62 [Source:HGNC Symbol;Acc:HGNC:8066]33163-1.084-0.6232Yes
99POLR2ARNA polymerase II subunit A [Source:HGNC Symbol;Acc:HGNC:9187]33205-1.098-0.6194Yes
100TRMT2AtRNA methyltransferase 2 homolog A [Source:HGNC Symbol;Acc:HGNC:24974]33285-1.124-0.6166Yes
101H3C1H3 clustered histone 1 [Source:HGNC Symbol;Acc:HGNC:4766]33294-1.126-0.6118Yes
102H2AC12H2A clustered histone 12 [Source:HGNC Symbol;Acc:HGNC:13671]33393-1.156-0.6093Yes
103ZCWPW1zinc finger CW-type and PWWP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:23486]33549-1.210-0.6081Yes
104HMGXB4HMG-box containing 4 [Source:HGNC Symbol;Acc:HGNC:5003]33574-1.221-0.6033Yes
105ASXL2ASXL transcriptional regulator 2 [Source:HGNC Symbol;Acc:HGNC:23805]33721-1.269-0.6017Yes
106KBTBD6kelch repeat and BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:25340]33848-1.319-0.5992Yes
107PPM1Dprotein phosphatase, Mg2+/Mn2+ dependent 1D [Source:HGNC Symbol;Acc:HGNC:9277]33881-1.330-0.5942Yes
108STT3BSTT3 oligosaccharyltransferase complex catalytic subunit B [Source:HGNC Symbol;Acc:HGNC:30611]33908-1.339-0.5889Yes
109PHC1polyhomeotic homolog 1 [Source:HGNC Symbol;Acc:HGNC:3182]34210-1.452-0.5906Yes
110UNGuracil DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:12572]34368-1.513-0.5882Yes
111POLD3DNA polymerase delta 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:20932]34420-1.534-0.5827Yes
112ZNF367zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]34624-1.612-0.5811Yes
113MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34684-1.643-0.5754Yes
114ZNF565zinc finger protein 565 [Source:HGNC Symbol;Acc:HGNC:26726]34692-1.646-0.5683Yes
115PKMYT1protein kinase, membrane associated tyrosine/threonine 1 [Source:HGNC Symbol;Acc:HGNC:29650]34732-1.666-0.5619Yes
116HNRNPRheterogeneous nuclear ribonucleoprotein R [Source:HGNC Symbol;Acc:HGNC:5047]34771-1.684-0.5555Yes
117PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34837-1.712-0.5496Yes
118SUV39H1suppressor of variegation 3-9 homolog 1 [Source:HGNC Symbol;Acc:HGNC:11479]34873-1.734-0.5429Yes
119SMC6structural maintenance of chromosomes 6 [Source:HGNC Symbol;Acc:HGNC:20466]34921-1.763-0.5363Yes
120SMC1Astructural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:HGNC:11111]34943-1.772-0.5290Yes
121ZCCHC8zinc finger CCHC-type containing 8 [Source:HGNC Symbol;Acc:HGNC:25265]34946-1.774-0.5212Yes
122H2AZ1H2A.Z variant histone 1 [Source:HGNC Symbol;Acc:HGNC:4741]34958-1.777-0.5136Yes
123SMC3structural maintenance of chromosomes 3 [Source:HGNC Symbol;Acc:HGNC:2468]35023-1.819-0.5073Yes
124MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35062-1.840-0.5001Yes
125POLA1DNA polymerase alpha 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9173]35129-1.886-0.4935Yes
126CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]35199-1.931-0.4868Yes
127ZNF503zinc finger protein 503 [Source:HGNC Symbol;Acc:HGNC:23589]35248-1.962-0.4794Yes
128MXD3MAX dimerization protein 3 [Source:HGNC Symbol;Acc:HGNC:14008]35272-1.975-0.4712Yes
129NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35290-1.989-0.4629Yes
130BRMS1LBRMS1 like transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:20512]35352-2.026-0.4555Yes
131AP4M1adaptor related protein complex 4 subunit mu 1 [Source:HGNC Symbol;Acc:HGNC:574]35382-2.051-0.4472Yes
132DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]35510-2.132-0.4412Yes
133SMAD6SMAD family member 6 [Source:HGNC Symbol;Acc:HGNC:6772]35524-2.138-0.4320Yes
134MSH5mutS homolog 5 [Source:HGNC Symbol;Acc:HGNC:7328]35591-2.193-0.4241Yes
135GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]35779-2.351-0.4187Yes
136TOPBP1DNA topoisomerase II binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17008]35809-2.377-0.4089Yes
137PRKDCprotein kinase, DNA-activated, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9413]35825-2.397-0.3987Yes
138PCIF1PDX1 C-terminal inhibiting factor 1 [Source:HGNC Symbol;Acc:HGNC:16200]35836-2.409-0.3883Yes
139MAZMYC associated zinc finger protein [Source:HGNC Symbol;Acc:HGNC:6914]35960-2.514-0.3804Yes
140ALDH6A1aldehyde dehydrogenase 6 family member A1 [Source:HGNC Symbol;Acc:HGNC:7179]36028-2.583-0.3708Yes
141UBR7ubiquitin protein ligase E3 component n-recognin 7 [Source:HGNC Symbol;Acc:HGNC:20344]36062-2.622-0.3600Yes
142CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36076-2.633-0.3487Yes
143MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36129-2.683-0.3382Yes
144E2F1E2F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3113]36208-2.759-0.3280Yes
145GINS3GINS complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25851]36250-2.795-0.3167Yes
146WDR62WD repeat domain 62 [Source:HGNC Symbol;Acc:HGNC:24502]36259-2.802-0.3045Yes
147FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]36281-2.827-0.2925Yes
148PAQR4progestin and adipoQ receptor family member 4 [Source:HGNC Symbol;Acc:HGNC:26386]36294-2.839-0.2802Yes
149JADE1jade family PHD finger 1 [Source:HGNC Symbol;Acc:HGNC:30027]36298-2.845-0.2677Yes
150ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36303-2.848-0.2551Yes
151GEN1GEN1 Holliday junction 5' flap endonuclease [Source:HGNC Symbol;Acc:HGNC:26881]36332-2.900-0.2430Yes
152MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36350-2.926-0.2305Yes
153POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]36361-2.936-0.2177Yes
154SLC9A5solute carrier family 9 member A5 [Source:HGNC Symbol;Acc:HGNC:11078]36399-2.985-0.2055Yes
155ATAD5ATPase family AAA domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25752]36431-3.025-0.1929Yes
156POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]36466-3.065-0.1802Yes
157FHOD1formin homology 2 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17905]36489-3.100-0.1670Yes
158MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36575-3.228-0.1550Yes
159DNMT1DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]36635-3.330-0.1418Yes
160IER5Limmediate early response 5 like [Source:HGNC Symbol;Acc:HGNC:23679]36678-3.400-0.1278Yes
161ZBTB4zinc finger and BTB domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23847]36711-3.442-0.1134Yes
162TMEM143transmembrane protein 143 [Source:HGNC Symbol;Acc:HGNC:25603]36747-3.516-0.0987Yes
163CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]36829-3.704-0.0845Yes
164MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36935-3.972-0.0697Yes
165RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36939-3.976-0.0521Yes
166E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36953-4.019-0.0346Yes
167H2AZ2H2A.Z variant histone 2 [Source:HGNC Symbol;Acc:HGNC:20664]36969-4.093-0.0168Yes
168TFAP4transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]37054-4.5210.0010Yes
Table: GSEA details [plain text format]



Fig 2: SGCGSSAAA_E2F1DP2_01   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SGCGSSAAA_E2F1DP2_01: Random ES distribution   
Gene set null distribution of ES for SGCGSSAAA_E2F1DP2_01