Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_MCM4
Enrichment Score (ES)-0.88673794
Normalized Enrichment Score (NES)-1.6866854
Nominal p-value0.0
FDR q-value4.37474E-4
FWER p-Value0.004
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_MCM4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]24280.770-0.0597No
2PA2G4proliferation-associated 2G4 [Source:HGNC Symbol;Acc:HGNC:8550]24330.767-0.0540No
3TCP1t-complex 1 [Source:HGNC Symbol;Acc:HGNC:11655]58950.012-0.1473No
4ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]260190.000-0.6906No
5TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32418-0.869-0.8567No
6PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32753-0.958-0.8585No
7RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33208-1.098-0.8624No
8FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]33397-1.158-0.8586No
9LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]34439-1.540-0.8750Yes
10MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34684-1.643-0.8691Yes
11PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34837-1.712-0.8602Yes
12MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35062-1.840-0.8522Yes
13FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35131-1.888-0.8397Yes
14MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35138-1.892-0.8254Yes
15GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35192-1.927-0.8122Yes
16NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]35290-1.989-0.7997Yes
17RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]35318-2.003-0.7851Yes
18AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35380-2.050-0.7712Yes
19CENPMcentromere protein M [Source:HGNC Symbol;Acc:HGNC:18352]35632-2.222-0.7611Yes
20GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35776-2.350-0.7470Yes
21GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]35779-2.351-0.7292Yes
22HELLShelicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]35800-2.370-0.7117Yes
23MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35807-2.374-0.6938Yes
24RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35830-2.402-0.6761Yes
25CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35993-2.546-0.6611Yes
26CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]36083-2.637-0.6434Yes
27MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36129-2.683-0.6242Yes
28ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36139-2.694-0.6039Yes
29HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36191-2.745-0.5844Yes
30SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]36199-2.753-0.5637Yes
31BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36239-2.787-0.5435Yes
32ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]36251-2.795-0.5225Yes
33MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36350-2.926-0.5029Yes
34RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]36359-2.931-0.4808Yes
35CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36367-2.940-0.4586Yes
36MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36439-3.036-0.4374Yes
37TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36461-3.062-0.4147Yes
38POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]36466-3.065-0.3915Yes
39PAICSphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase [Source:HGNC Symbol;Acc:HGNC:8587]36469-3.069-0.3681Yes
40UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36476-3.083-0.3448Yes
41MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36575-3.228-0.3229Yes
42RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36654-3.353-0.2995Yes
43KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36655-3.354-0.2740Yes
44CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36660-3.369-0.2484Yes
45AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36698-3.424-0.2234Yes
46KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36709-3.440-0.1974Yes
47BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36780-3.580-0.1721Yes
48KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36808-3.649-0.1450Yes
49FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36828-3.703-0.1174Yes
50ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36920-3.941-0.0898Yes
51RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36939-3.976-0.0600Yes
52NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36994-4.180-0.0297Yes
53TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]37006-4.2360.0023Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_MCM4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_MCM4: Random ES distribution   
Gene set null distribution of ES for GNF2_MCM4