Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_RFC4
Enrichment Score (ES)-0.8452428
Normalized Enrichment Score (NES)-1.6451226
Nominal p-value0.0
FDR q-value4.0841842E-4
FWER p-Value0.007
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_RFC4   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RANBP1RAN binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9847]20170.936-0.0467No
2CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]24280.770-0.0515No
3DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]38060.420-0.0852No
4RANRAN, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9846]44980.278-0.1015No
5CCT2chaperonin containing TCP1 subunit 2 [Source:HGNC Symbol;Acc:HGNC:1615]53020.130-0.1221No
6SNRPEsmall nuclear ribonucleoprotein polypeptide E [Source:HGNC Symbol;Acc:HGNC:11161]56000.072-0.1296No
7SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]57820.036-0.1342No
8ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]260190.000-0.6806No
9ITGB3BPintegrin subunit beta 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6157]28098-0.120-0.7357No
10TIMELESStimeless circadian regulator [Source:HGNC Symbol;Acc:HGNC:11813]28857-0.228-0.7543No
11SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]31383-0.630-0.8173No
12TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32418-0.869-0.8381Yes
13SSRP1structure specific recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:11327]32525-0.892-0.8336Yes
14SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit [Source:HGNC Symbol;Acc:HGNC:11465]32601-0.917-0.8280Yes
15PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32753-0.958-0.8242Yes
16MLH1mutL homolog 1 [Source:HGNC Symbol;Acc:HGNC:7127]32781-0.966-0.8169Yes
17RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33208-1.098-0.8194Yes
18FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]33397-1.158-0.8149Yes
19MCM10minichromosome maintenance 10 replication initiation factor [Source:HGNC Symbol;Acc:HGNC:18043]33916-1.342-0.8178Yes
20CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]34381-1.518-0.8178Yes
21KNTC1kinetochore associated 1 [Source:HGNC Symbol;Acc:HGNC:17255]34562-1.584-0.8095Yes
22MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34684-1.643-0.7992Yes
23RFC5replication factor C subunit 5 [Source:HGNC Symbol;Acc:HGNC:9973]34783-1.690-0.7879Yes
24PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34837-1.712-0.7752Yes
25CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]34882-1.740-0.7620Yes
26H2AZ1H2A.Z variant histone 1 [Source:HGNC Symbol;Acc:HGNC:4741]34958-1.777-0.7494Yes
27MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35062-1.840-0.7370Yes
28PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35085-1.852-0.7223Yes
29PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]35101-1.865-0.7073Yes
30FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35131-1.888-0.6925Yes
31GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35192-1.927-0.6782Yes
32RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]35318-2.003-0.6650Yes
33RPA3replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]35348-2.023-0.6491Yes
34CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]35407-2.067-0.6336Yes
35RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]35638-2.227-0.6214Yes
36SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35759-2.331-0.6054Yes
37GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35776-2.350-0.5864Yes
38GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]35779-2.351-0.5670Yes
39RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35830-2.402-0.5485Yes
40MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36129-2.683-0.5344Yes
41SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]36199-2.753-0.5135Yes
42MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]36350-2.926-0.4934Yes
43RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]36359-2.931-0.4694Yes
44CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36367-2.940-0.4453Yes
45CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36421-3.011-0.4219Yes
46TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36461-3.062-0.3977Yes
47PAICSphosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase [Source:HGNC Symbol;Acc:HGNC:8587]36469-3.069-0.3725Yes
48UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36476-3.083-0.3472Yes
49MSH6mutS homolog 6 [Source:HGNC Symbol;Acc:HGNC:7329]36542-3.181-0.3227Yes
50MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36575-3.228-0.2969Yes
51LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]36576-3.229-0.2702Yes
52CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36660-3.369-0.2446Yes
53KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36709-3.440-0.2175Yes
54NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36827-3.702-0.1901Yes
55FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36828-3.703-0.1595Yes
56BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36873-3.821-0.1291Yes
57ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36920-3.941-0.0978Yes
58MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36935-3.972-0.0654Yes
59NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36994-4.180-0.0324Yes
60TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]37006-4.2360.0023Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_RFC4   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_RFC4: Random ES distribution   
Gene set null distribution of ES for GNF2_RFC4