Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetMODULE_223
Enrichment Score (ES)0.57597184
Normalized Enrichment Score (NES)1.5216923
Nominal p-value0.0
FDR q-value0.20047148
FWER p-Value0.887
Table: GSEA Results Summary



Fig 1: Enrichment plot: MODULE_223   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]04.9950.0332Yes
2IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]14.9940.0665Yes
3CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]64.9510.0993Yes
4IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]104.9320.1321Yes
5ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]184.8490.1642Yes
6FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]314.7150.1952Yes
7OSMoncostatin M [Source:HGNC Symbol;Acc:HGNC:8506]424.5720.2254Yes
8MYCMYC proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7553]614.4050.2542Yes
9PDGFBplatelet derived growth factor subunit B [Source:HGNC Symbol;Acc:HGNC:8800]674.3390.2829Yes
10EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]764.2400.3109Yes
11CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]1093.9800.3366Yes
12CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]1283.9020.3621Yes
13IL15interleukin 15 [Source:HGNC Symbol;Acc:HGNC:5977]2083.3920.3825Yes
14MTHFRmethylenetetrahydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:7436]2123.3530.4047Yes
15TSPAN3tetraspanin 3 [Source:HGNC Symbol;Acc:HGNC:17752]3262.8200.4204Yes
16BCAT1branched chain amino acid transaminase 1 [Source:HGNC Symbol;Acc:HGNC:976]4002.6100.4358Yes
17TLR1toll like receptor 1 [Source:HGNC Symbol;Acc:HGNC:11847]4932.3870.4492Yes
18IL2RGinterleukin 2 receptor subunit gamma [Source:HGNC Symbol;Acc:HGNC:6010]5952.1410.4607Yes
19BTG1BTG anti-proliferation factor 1 [Source:HGNC Symbol;Acc:HGNC:1130]6811.9810.4716Yes
20NAB2NGFI-A binding protein 2 [Source:HGNC Symbol;Acc:HGNC:7627]7611.8740.4820Yes
21PRDX1peroxiredoxin 1 [Source:HGNC Symbol;Acc:HGNC:9352]7951.8240.4932Yes
22CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]8021.8110.5051Yes
23HLA-Bmajor histocompatibility complex, class I, B [Source:HGNC Symbol;Acc:HGNC:4932]10951.4720.5070Yes
24EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]12931.3170.5104Yes
25FTH1ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]13681.2660.5169Yes
26TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]13871.2540.5247Yes
27BCL6BCL6 transcription repressor [Source:HGNC Symbol;Acc:HGNC:1001]13901.2520.5330Yes
28NAMPTnicotinamide phosphoribosyltransferase [Source:HGNC Symbol;Acc:HGNC:30092]14061.2430.5409Yes
29HLA-Amajor histocompatibility complex, class I, A [Source:HGNC Symbol;Acc:HGNC:4931]14641.2090.5474Yes
30HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]16001.1450.5513Yes
31PDGFAplatelet derived growth factor subunit A [Source:HGNC Symbol;Acc:HGNC:8799]17651.0520.5539Yes
32HLA-Cmajor histocompatibility complex, class I, C [Source:HGNC Symbol;Acc:HGNC:4933]17721.0500.5607Yes
33HLA-Gmajor histocompatibility complex, class I, G [Source:HGNC Symbol;Acc:HGNC:4964]22970.8160.5520Yes
34HLA-Fmajor histocompatibility complex, class I, F [Source:HGNC Symbol;Acc:HGNC:4963]23330.8020.5564Yes
35MXD1MAX dimerization protein 1 [Source:HGNC Symbol;Acc:HGNC:6761]23530.7960.5611Yes
36ZEB1zinc finger E-box binding homeobox 1 [Source:HGNC Symbol;Acc:HGNC:11642]23790.7870.5657Yes
37CD86CD86 molecule [Source:HGNC Symbol;Acc:HGNC:1705]24040.7760.5702Yes
38MDKmidkine [Source:HGNC Symbol;Acc:HGNC:6972]24430.7650.5743Yes
39KCNN4potassium calcium-activated channel subfamily N member 4 [Source:HGNC Symbol;Acc:HGNC:6293]25600.7240.5760Yes
40IL6interleukin 6 [Source:HGNC Symbol;Acc:HGNC:6018]28900.6260.5712No
41DAB2DAB adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:2662]32590.5370.5648No
42DNAJC3DnaJ heat shock protein family (Hsp40) member C3 [Source:HGNC Symbol;Acc:HGNC:9439]34990.4810.5616No
43IL18interleukin 18 [Source:HGNC Symbol;Acc:HGNC:5986]36110.4560.5616No
44PSPHP1phosphoserine phosphatase pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9578]37790.4260.5599No
45KLF6Kruppel like factor 6 [Source:HGNC Symbol;Acc:HGNC:2235]38350.4130.5612No
46EGFepidermal growth factor [Source:HGNC Symbol;Acc:HGNC:3229]40490.3680.5579No
47B2Mbeta-2-microglobulin [Source:HGNC Symbol;Acc:HGNC:914]46310.2460.5438No
48CD5CD5 molecule [Source:HGNC Symbol;Acc:HGNC:1685]51390.1620.5311No
49CSRP2cysteine and glycine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2470]56440.0630.5179No
50CCL14C-C motif chemokine ligand 14 [Source:HGNC Symbol;Acc:HGNC:10612]60110.0000.5080No
51SELPselectin P [Source:HGNC Symbol;Acc:HGNC:10721]68060.0000.4865No
52SELLselectin L [Source:HGNC Symbol;Acc:HGNC:10720]68070.0000.4865No
53RNASE6ribonuclease A family member k6 [Source:HGNC Symbol;Acc:HGNC:10048]68830.0000.4845No
54AREGamphiregulin [Source:HGNC Symbol;Acc:HGNC:651]69430.0000.4829No
55PDGFRAplatelet derived growth factor receptor alpha [Source:HGNC Symbol;Acc:HGNC:8803]71710.0000.4768No
56TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]84920.0000.4410No
57LY6Elymphocyte antigen 6 family member E [Source:HGNC Symbol;Acc:HGNC:6727]88580.0000.4312No
58LY86lymphocyte antigen 86 [Source:HGNC Symbol;Acc:HGNC:16837]88740.0000.4307No
59GRPRgastrin releasing peptide receptor [Source:HGNC Symbol;Acc:HGNC:4609]97180.0000.4079No
60PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]106780.0000.3820No
61EREGepiregulin [Source:HGNC Symbol;Acc:HGNC:3443]112110.0000.3676No
62S100BS100 calcium binding protein B [Source:HGNC Symbol;Acc:HGNC:10500]113620.0000.3635No
63ERBB2erb-b2 receptor tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:3430]117190.0000.3539No
64TGFAtransforming growth factor alpha [Source:HGNC Symbol;Acc:HGNC:11765]122870.0000.3385No
65IGF2insulin like growth factor 2 [Source:HGNC Symbol;Acc:HGNC:5466]123030.0000.3381No
66BST2bone marrow stromal cell antigen 2 [Source:HGNC Symbol;Acc:HGNC:1119]123040.0000.3381No
67VIPR1vasoactive intestinal peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:12694]132150.0000.3135No
68LILRA1leukocyte immunoglobulin like receptor A1 [Source:HGNC Symbol;Acc:HGNC:6602]132750.0000.3119No
69LILRB3leukocyte immunoglobulin like receptor B3 [Source:HGNC Symbol;Acc:HGNC:6607]132820.0000.3117No
70LILRB4leukocyte immunoglobulin like receptor B4 [Source:HGNC Symbol;Acc:HGNC:6608]132830.0000.3117No
71LILRB5leukocyte immunoglobulin like receptor B5 [Source:HGNC Symbol;Acc:HGNC:6609]132840.0000.3117No
72IL15RAinterleukin 15 receptor subunit alpha [Source:HGNC Symbol;Acc:HGNC:5978]139960.0000.2925No
73TACSTD2tumor associated calcium signal transducer 2 [Source:HGNC Symbol;Acc:HGNC:11530]143170.0000.2838No
74CD2CD2 molecule [Source:HGNC Symbol;Acc:HGNC:1639]156750.0000.2471No
75CD4CD4 molecule [Source:HGNC Symbol;Acc:HGNC:1678]156760.0000.2471No
76HLA-DRAmajor histocompatibility complex, class II, DR alpha [Source:HGNC Symbol;Acc:HGNC:4947]161390.0000.2346No
77MST1Rmacrophage stimulating 1 receptor [Source:HGNC Symbol;Acc:HGNC:7381]161820.0000.2335No
78ADRA1Dadrenoceptor alpha 1D [Source:HGNC Symbol;Acc:HGNC:280]164360.0000.2266No
79TGFBItransforming growth factor beta induced [Source:HGNC Symbol;Acc:HGNC:11771]166060.0000.2221No
80FGAfibrinogen alpha chain [Source:HGNC Symbol;Acc:HGNC:3661]166130.0000.2219No
81FGGfibrinogen gamma chain [Source:HGNC Symbol;Acc:HGNC:3694]166140.0000.2219No
82GCGglucagon [Source:HGNC Symbol;Acc:HGNC:4191]168680.0000.2150No
83SPOCK1SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:HGNC Symbol;Acc:HGNC:11251]169980.0000.2116No
84HFEhomeostatic iron regulator [Source:HGNC Symbol;Acc:HGNC:4886]172790.0000.2040No
85IL3interleukin 3 [Source:HGNC Symbol;Acc:HGNC:6011]176600.0000.1937No
86CHRM3cholinergic receptor muscarinic 3 [Source:HGNC Symbol;Acc:HGNC:1952]177670.0000.1908No
87HLA-DRB5major histocompatibility complex, class II, DR beta 5 [Source:HGNC Symbol;Acc:HGNC:4953]179910.0000.1848No
88OSMRoncostatin M receptor [Source:HGNC Symbol;Acc:HGNC:8507]189280.0000.1595No
89CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]193800.0000.1472No
90CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193840.0000.1472No
91PTNpleiotrophin [Source:HGNC Symbol;Acc:HGNC:9630]200530.0000.1291No
92TFF3trefoil factor 3 [Source:HGNC Symbol;Acc:HGNC:11757]206330.0000.1134No
93EDNRAendothelin receptor type A [Source:HGNC Symbol;Acc:HGNC:3179]217830.0000.0823No
94CCN1cellular communication network factor 1 [Source:HGNC Symbol;Acc:HGNC:2654]228650.0000.0531No
95SLAMF1signaling lymphocytic activation molecule family member 1 [Source:HGNC Symbol;Acc:HGNC:10903]228990.0000.0522No
96CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]229500.0000.0508No
97CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]230060.0000.0493No
98CD8BCD8b molecule [Source:HGNC Symbol;Acc:HGNC:1707]230180.0000.0490No
99CD8ACD8a molecule [Source:HGNC Symbol;Acc:HGNC:1706]230190.0000.0490No
100DEFA5defensin alpha 5 [Source:HGNC Symbol;Acc:HGNC:2764]233650.0000.0397No
101TPSAB1tryptase alpha/beta 1 [Source:HGNC Symbol;Acc:HGNC:12019]239340.0000.0243No
102LAMP3lysosomal associated membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:14582]243940.0000.0119No
103FGF4fibroblast growth factor 4 [Source:HGNC Symbol;Acc:HGNC:3682]252510.000-0.0113No
104CD79ACD79a molecule [Source:HGNC Symbol;Acc:HGNC:1698]253900.000-0.0150No
105REG1Bregenerating family member 1 beta [Source:HGNC Symbol;Acc:HGNC:9952]262460.000-0.0381No
106RPS27ribosomal protein S27 [Source:HGNC Symbol;Acc:HGNC:10416]27475-0.021-0.0712No
107ENPEPglutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]27601-0.044-0.0743No
108NCF4neutrophil cytosolic factor 4 [Source:HGNC Symbol;Acc:HGNC:7662]27933-0.094-0.0827No
109RPS4Xribosomal protein S4 X-linked [Source:HGNC Symbol;Acc:HGNC:10424]28327-0.154-0.0923No
110EMP2epithelial membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:3334]29394-0.310-0.1191No
111LRPAP1LDL receptor related protein associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6701]29446-0.319-0.1183No
112HLA-DMBmajor histocompatibility complex, class II, DM beta [Source:HGNC Symbol;Acc:HGNC:4935]29547-0.333-0.1188No
113EMP3epithelial membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3335]29680-0.351-0.1200No
114HPhaptoglobin [Source:HGNC Symbol;Acc:HGNC:5141]30408-0.462-0.1366No
115GRNgranulin precursor [Source:HGNC Symbol;Acc:HGNC:4601]30681-0.507-0.1406No
116SHC1SHC adaptor protein 1 [Source:HGNC Symbol;Acc:HGNC:10840]31299-0.610-0.1533No
117IGF1insulin like growth factor 1 [Source:HGNC Symbol;Acc:HGNC:5464]31515-0.655-0.1547No
118IL6Rinterleukin 6 receptor [Source:HGNC Symbol;Acc:HGNC:6019]31639-0.678-0.1536No
119FGBfibrinogen beta chain [Source:HGNC Symbol;Acc:HGNC:3662]31659-0.681-0.1495No
120AKR1C3aldo-keto reductase family 1 member C3 [Source:HGNC Symbol;Acc:HGNC:386]32315-0.842-0.1617No
121LILRA2leukocyte immunoglobulin like receptor A2 [Source:HGNC Symbol;Acc:HGNC:6603]32505-0.887-0.1609No
122GAS6growth arrest specific 6 [Source:HGNC Symbol;Acc:HGNC:4168]32784-0.970-0.1619No
123CRIP1cysteine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2360]33094-1.061-0.1632No
124SFNstratifin [Source:HGNC Symbol;Acc:HGNC:10773]33098-1.062-0.1563No
125IRAK1interleukin 1 receptor associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:6112]33209-1.098-0.1519No
126CAPN1calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]33595-1.226-0.1542No
127RUNX3RUNX family transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:10473]33606-1.233-0.1462No
128CDK5R1cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]33727-1.274-0.1410No
129INSIG1insulin induced gene 1 [Source:HGNC Symbol;Acc:HGNC:6083]34221-1.457-0.1447No
130CREG1cellular repressor of E1A stimulated genes 1 [Source:HGNC Symbol;Acc:HGNC:2351]34250-1.466-0.1357No
131CD81CD81 molecule [Source:HGNC Symbol;Acc:HGNC:1701]34448-1.544-0.1307No
132P4HA2prolyl 4-hydroxylase subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:8547]34660-1.631-0.1256No
133LRP1LDL receptor related protein 1 [Source:HGNC Symbol;Acc:HGNC:6692]35450-2.098-0.1330No
134NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]35623-2.214-0.1229No
135EMP1epithelial membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:3333]35786-2.355-0.1116No
136CSF3Rcolony stimulating factor 3 receptor [Source:HGNC Symbol;Acc:HGNC:2439]36194-2.747-0.1043No
137EPS8epidermal growth factor receptor pathway substrate 8 [Source:HGNC Symbol;Acc:HGNC:3420]36318-2.877-0.0885No
138UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36476-3.083-0.0722No
139BCAR1BCAR1 scaffold protein, Cas family member [Source:HGNC Symbol;Acc:HGNC:971]36524-3.153-0.0525No
140ZFP36L2ZFP36 ring finger protein like 2 [Source:HGNC Symbol;Acc:HGNC:1108]36549-3.191-0.0319No
141SERPINF1serpin family F member 1 [Source:HGNC Symbol;Acc:HGNC:8824]36658-3.366-0.0125No
142HLA-DOAmajor histocompatibility complex, class II, DO alpha [Source:HGNC Symbol;Acc:HGNC:4936]36793-3.6240.0080No
Table: GSEA details [plain text format]



Fig 2: MODULE_223   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: MODULE_223: Random ES distribution   
Gene set null distribution of ES for MODULE_223