Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetBMI1_DN.V1_UP
Enrichment Score (ES)0.4317628
Normalized Enrichment Score (NES)1.1681974
Nominal p-value0.03125
FDR q-value0.1800397
FWER p-Value0.693
Table: GSEA Results Summary



Fig 1: Enrichment plot: BMI1_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]04.9950.0325Yes
2PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]94.9350.0645Yes
3VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]634.3820.0916Yes
4EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]764.2400.1189Yes
5ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]804.2020.1461Yes
6FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]864.1620.1731Yes
7CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]1283.9020.1974Yes
8FZD5frizzled class receptor 5 [Source:HGNC Symbol;Acc:HGNC:4043]1853.5440.2190Yes
9GPRC5AG protein-coupled receptor class C group 5 member A [Source:HGNC Symbol;Acc:HGNC:9836]2143.3470.2400Yes
10TAP1transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]2203.3160.2615Yes
11C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]2483.1740.2814Yes
12CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]3062.9080.2988Yes
13ACTA2actin alpha 2, smooth muscle [Source:HGNC Symbol;Acc:HGNC:130]3182.8570.3172Yes
14PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]3672.7160.3335Yes
15FLNBfilamin B [Source:HGNC Symbol;Acc:HGNC:3755]4532.4690.3473Yes
16ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]4742.4220.3626Yes
17NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]6172.1220.3725Yes
18AGRNagrin [Source:HGNC Symbol;Acc:HGNC:329]8901.7040.3763Yes
19CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]11871.4000.3774Yes
20FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]12101.3820.3858Yes
21TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]13991.2460.3888Yes
22SLC2A1solute carrier family 2 member 1 [Source:HGNC Symbol;Acc:HGNC:11005]14721.2040.3947Yes
23SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]14811.2000.4023Yes
24LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]15131.1820.4092Yes
25HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]16001.1450.4143Yes
26SLC1A5solute carrier family 1 member 5 [Source:HGNC Symbol;Acc:HGNC:10943]17801.0470.4163Yes
27TMEM62transmembrane protein 62 [Source:HGNC Symbol;Acc:HGNC:26269]18051.0300.4223Yes
28SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]19890.9490.4236Yes
29SLC52A2solute carrier family 52 member 2 [Source:HGNC Symbol;Acc:HGNC:30224]20850.9040.4269Yes
30FKRPfukutin related protein [Source:HGNC Symbol;Acc:HGNC:17997]21200.8890.4318Yes
31INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]27660.6610.4186No
32GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]29050.6240.4189No
33CD82CD82 molecule [Source:HGNC Symbol;Acc:HGNC:6210]31270.5700.4167No
34PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]32670.5350.4164No
35SLCO2A1solute carrier organic anion transporter family member 2A1 [Source:HGNC Symbol;Acc:HGNC:10955]32730.5340.4197No
36TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]34150.5010.4192No
37FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]37220.4350.4137No
38CTSScathepsin S [Source:HGNC Symbol;Acc:HGNC:2545]40420.3690.4075No
39F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]43900.2970.4000No
40TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]44830.2820.3994No
41SLC2A6solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]45540.2660.3992No
42MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]45730.2620.4004No
43KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]46380.2450.4003No
44DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]50150.1760.3913No
45BST1bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:HGNC:1118]50800.1640.3906No
46MMP15matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]52190.1470.3878No
47CSPG5chondroitin sulfate proteoglycan 5 [Source:HGNC Symbol;Acc:HGNC:2467]56950.0540.3753No
48CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]60460.0000.3659No
49FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]65470.0000.3523No
50FGFR1fibroblast growth factor receptor 1 [Source:HGNC Symbol;Acc:HGNC:3688]68130.0000.3452No
51VANGL1VANGL planar cell polarity protein 1 [Source:HGNC Symbol;Acc:HGNC:15512]76660.0000.3221No
52GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]78810.0000.3163No
53PROP1PROP paired-like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9455]79780.0000.3137No
54HOXB1homeobox B1 [Source:HGNC Symbol;Acc:HGNC:5111]84600.0000.3007No
55TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]84920.0000.2998No
56VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]92490.0000.2794No
57TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]95130.0000.2723No
58ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]96420.0000.2688No
59ACKR3atypical chemokine receptor 3 [Source:HGNC Symbol;Acc:HGNC:23692]108000.0000.2375No
60LRRC15leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:HGNC:20818]111110.0000.2291No
61PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]113490.0000.2227No
62PSG5pregnancy specific beta-1-glycoprotein 5 [Source:HGNC Symbol;Acc:HGNC:9522]115530.0000.2172No
63IGKCimmunoglobulin kappa constant [Source:HGNC Symbol;Acc:HGNC:5716]123400.0000.1959No
64TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]124220.0000.1937No
65VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]125780.0000.1895No
66TIE1tyrosine kinase with immunoglobulin like and EGF like domains 1 [Source:HGNC Symbol;Acc:HGNC:11809]128950.0000.1810No
67GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]132580.0000.1712No
68PODXLpodocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]133160.0000.1696No
69LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]150080.0000.1239No
70COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]154640.0000.1115No
71DKK1dickkopf WNT signaling pathway inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:2891]162830.0000.0894No
72COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]164010.0000.0862No
73GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]168360.0000.0745No
74TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]170730.0000.0681No
75CDCP1CUB domain containing protein 1 [Source:HGNC Symbol;Acc:HGNC:24357]172230.0000.0641No
76GABREgamma-aminobutyric acid type A receptor subunit epsilon [Source:HGNC Symbol;Acc:HGNC:4085]172440.0000.0635No
77HAPLN1hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:HGNC:2380]173540.0000.0606No
78SRPX2sushi repeat containing protein X-linked 2 [Source:HGNC Symbol;Acc:HGNC:30668]174560.0000.0578No
79MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]176180.0000.0535No
80MICBMHC class I polypeptide-related sequence B [Source:HGNC Symbol;Acc:HGNC:7091]176190.0000.0535No
81SEMA3Gsemaphorin 3G [Source:HGNC Symbol;Acc:HGNC:30400]178020.0000.0486No
82PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]178150.0000.0482No
83BDKRB2bradykinin receptor B2 [Source:HGNC Symbol;Acc:HGNC:1030]179000.0000.0460No
84BMP5bone morphogenetic protein 5 [Source:HGNC Symbol;Acc:HGNC:1072]190020.0000.0162No
85BMP4bone morphogenetic protein 4 [Source:HGNC Symbol;Acc:HGNC:1071]190040.0000.0161No
86MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]190290.0000.0155No
87CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]193800.0000.0060No
88TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]197820.000-0.0049No
89KRT17keratin 17 [Source:HGNC Symbol;Acc:HGNC:6427]218770.000-0.0615No
90CCN3cellular communication network factor 3 [Source:HGNC Symbol;Acc:HGNC:7885]228640.000-0.0882No
91FOXP3forkhead box P3 [Source:HGNC Symbol;Acc:HGNC:6106]233240.000-0.1006No
92CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]233480.000-0.1013No
93LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]235890.000-0.1078No
94CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]243830.000-0.1292No
95NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]245970.000-0.1350No
96LSAMPlimbic system associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]246020.000-0.1351No
97CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]247320.000-0.1386No
98MFAP5microfibril associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29673]253410.000-0.1550No
99PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]254270.000-0.1573No
100ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]262850.000-0.1805No
101ITGB6integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]262880.000-0.1806No
102SLC5A6solute carrier family 5 member 6 [Source:HGNC Symbol;Acc:HGNC:11041]27477-0.021-0.2126No
103CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]27595-0.043-0.2155No
104HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]27843-0.082-0.2217No
105ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]27931-0.093-0.2234No
106STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]29500-0.326-0.2637No
107TLCD3ATLC domain containing 3A [Source:HGNC Symbol;Acc:HGNC:29646]29747-0.362-0.2680No
108IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]29779-0.366-0.2665No
109EPHA2EPH receptor A2 [Source:HGNC Symbol;Acc:HGNC:3386]29874-0.379-0.2666No
110MFGE8milk fat globule EGF and factor V/VIII domain containing [Source:HGNC Symbol;Acc:HGNC:7036]30060-0.408-0.2689No
111POMT2protein O-mannosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:19743]30981-0.555-0.2902No
112ATF6activating transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:791]31022-0.562-0.2876No
113TAGLNtransgelin [Source:HGNC Symbol;Acc:HGNC:11553]31118-0.581-0.2864No
114STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]31586-0.668-0.2947No
115LTBP4latent transforming growth factor beta binding protein 4 [Source:HGNC Symbol;Acc:HGNC:6717]31705-0.692-0.2934No
116INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]31890-0.728-0.2936No
117ANPEPalanyl aminopeptidase, membrane [Source:HGNC Symbol;Acc:HGNC:500]32022-0.759-0.2922No
118SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]32124-0.785-0.2898No
119TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]32167-0.801-0.2858No
120JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]32464-0.879-0.2881No
121ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]32512-0.889-0.2835No
122ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]32641-0.927-0.2810No
123ANXA3annexin A3 [Source:HGNC Symbol;Acc:HGNC:541]32722-0.950-0.2769No
124FESFES proto-oncogene, tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:3657]33556-1.213-0.2916No
125CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]34224-1.458-0.3001No
126SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]34249-1.466-0.2912No
127COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]34358-1.509-0.2843No
128B4GALNT1beta-1,4-N-acetyl-galactosaminyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4117]34394-1.524-0.2754No
129PANX1pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]34492-1.561-0.2678No
130CTNScystinosin, lysosomal cystine transporter [Source:HGNC Symbol;Acc:HGNC:2518]34972-1.785-0.2691No
131PLXNA2plexin A2 [Source:HGNC Symbol;Acc:HGNC:9100]35120-1.876-0.2609No
132SLC29A2solute carrier family 29 member 2 [Source:HGNC Symbol;Acc:HGNC:11004]35567-2.171-0.2588No
133CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]35594-2.194-0.2452No
134LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]35962-2.515-0.2388No
135C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]36131-2.684-0.2259No
136P3H3prolyl 3-hydroxylase 3 [Source:HGNC Symbol;Acc:HGNC:19318]36440-3.037-0.2144No
137KCNC4potassium voltage-gated channel subfamily C member 4 [Source:HGNC Symbol;Acc:HGNC:6236]36475-3.082-0.1953No
138LRP5LDL receptor related protein 5 [Source:HGNC Symbol;Acc:HGNC:6697]36495-3.107-0.1755No
139FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]36548-3.190-0.1562No
140SIRPAsignal regulatory protein alpha [Source:HGNC Symbol;Acc:HGNC:9662]36558-3.207-0.1355No
141SLC29A1solute carrier family 29 member 1 (Augustine blood group) [Source:HGNC Symbol;Acc:HGNC:11003]36625-3.312-0.1157No
142ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36640-3.334-0.0944No
143ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]36743-3.505-0.0743No
144CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]36829-3.704-0.0525No
145TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]37056-4.528-0.0291No
146ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]37064-4.6100.0007No
Table: GSEA details [plain text format]



Fig 2: BMI1_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BMI1_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for BMI1_DN.V1_UP