Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetKRAS.BREAST_UP.V1_UP
Enrichment Score (ES)0.46255082
Normalized Enrichment Score (NES)1.241054
Nominal p-value0.0
FDR q-value0.11414783
FWER p-Value0.476
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]04.9950.0712Yes
2IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]14.9940.1423Yes
3TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]564.4350.2040Yes
4TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]1513.7290.2546Yes
5GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]2183.3260.3002Yes
6MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]4122.5690.3316Yes
7DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]4802.4060.3641Yes
8CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]4862.3980.3981Yes
9IL2RGinterleukin 2 receptor subunit gamma [Source:HGNC Symbol;Acc:HGNC:6010]5952.1410.4257Yes
10IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]9151.6760.4409Yes
11IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]9671.6160.4626Yes
12PPP1R15Aprotein phosphatase 1 regulatory subunit 15A [Source:HGNC Symbol;Acc:HGNC:14375]18541.0140.4530No
13PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]27060.6740.4396No
14ACP3acid phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:125]28560.6350.4446No
15AKAP12A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]33050.5260.4400No
16TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]37660.4290.4336No
17MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]39550.3860.4340No
18TLR8toll like receptor 8 [Source:HGNC Symbol;Acc:HGNC:15632]47120.2340.4169No
19BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]48530.2090.4161No
20SYPsynaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]52790.1340.4065No
21PCDHGA11protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:HGNC:8698]53290.1250.4070No
22FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]57400.0460.3965No
23CCL16C-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:10614]60360.0000.3885No
24CCL22C-C motif chemokine ligand 22 [Source:HGNC Symbol;Acc:HGNC:10621]60430.0000.3884No
25SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]61910.0000.3844No
26DEFB4Adefensin beta 4A [Source:HGNC Symbol;Acc:HGNC:2767]68320.0000.3671No
27ADAMDEC1ADAM like decysin 1 [Source:HGNC Symbol;Acc:HGNC:16299]68550.0000.3665No
28MAPK4mitogen-activated protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:6878]81020.0000.3328No
29OPRPNopiorphin prepropeptide [Source:HGNC Symbol;Acc:HGNC:17279]81320.0000.3320No
30CYB5R2cytochrome b5 reductase 2 [Source:HGNC Symbol;Acc:HGNC:24376]81370.0000.3319No
31PRRX1paired related homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9142]82500.0000.3289No
32CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]84100.0000.3245No
33SOX17SRY-box transcription factor 17 [Source:HGNC Symbol;Acc:HGNC:18122]84330.0000.3240No
34CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]85220.0000.3216No
35CDK2AP2P3cyclin dependent kinase 2 associated protein 2 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38494]94050.0000.2977No
36KCNA2potassium voltage-gated channel subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:6220]94230.0000.2972No
37NPAS1neuronal PAS domain protein 1 [Source:HGNC Symbol;Acc:HGNC:7894]95010.0000.2952No
38KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]95540.0000.2938No
39FAM30Afamily with sequence similarity 30 member A [Source:HGNC Symbol;Acc:HGNC:19955]95880.0000.2929No
40SPRR2Bsmall proline rich protein 2B [Source:HGNC Symbol;Acc:HGNC:11262]98970.0000.2845No
41IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]101190.0000.2785No
42BAIAP3BAI1 associated protein 3 [Source:HGNC Symbol;Acc:HGNC:948]101340.0000.2782No
43ERC2-IT1ERC2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:1229]101510.0000.2777No
44KLK12kallikrein related peptidase 12 [Source:HGNC Symbol;Acc:HGNC:6360]101800.0000.2770No
45KCNA10potassium voltage-gated channel subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:6219]105260.0000.2676No
46PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]106780.0000.2635No
47ACKR4atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]107990.0000.2603No
48GPR37L1G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]109100.0000.2573No
49PRB4proline rich protein BstNI subfamily 4 [Source:HGNC Symbol;Acc:HGNC:9340]111590.0000.2506No
50USH2Ausherin [Source:HGNC Symbol;Acc:HGNC:12601]111940.0000.2497No
51TMPRSS4transmembrane serine protease 4 [Source:HGNC Symbol;Acc:HGNC:11878]112520.0000.2482No
52CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]113910.0000.2444No
53IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]114830.0000.2420No
54PSCAprostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]114990.0000.2415No
55CMA1chymase 1 [Source:HGNC Symbol;Acc:HGNC:2097]115230.0000.2409No
56ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]115950.0000.2390No
57ETV2ETS variant transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:3491]120250.0000.2274No
58IGF2insulin like growth factor 2 [Source:HGNC Symbol;Acc:HGNC:5466]123030.0000.2199No
59TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]124390.0000.2162No
60GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]129860.0000.2015No
61OR2C1olfactory receptor family 2 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:8242]133120.0000.1927No
62PDE3Bphosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]133290.0000.1922No
63IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]136740.0000.1829No
64EFNA5ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225]141510.0000.1700No
65HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]142330.0000.1679No
66ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]146080.0000.1577No
67IL17RBinterleukin 17 receptor B [Source:HGNC Symbol;Acc:HGNC:18015]149030.0000.1498No
68SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]152610.0000.1401No
69GJA8gap junction protein alpha 8 [Source:HGNC Symbol;Acc:HGNC:4281]153300.0000.1383No
70IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158220.0000.1250No
71AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]159250.0000.1222No
72MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]170850.0000.0909No
73CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]178270.0000.0708No
74DNAJA4DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]184530.0000.0539No
75SPON2spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]188830.0000.0423No
76COL9A1collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]189100.0000.0416No
77BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190010.0000.0392No
78NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]193070.0000.0309No
79CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]193820.0000.0289No
80HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]197030.0000.0202No
81GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]199030.0000.0148No
82NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]199040.0000.0148No
83KLK6kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]206090.000-0.0042No
84MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]208350.000-0.0103No
85KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]218330.000-0.0373No
86CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]220410.000-0.0429No
87RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]221280.000-0.0452No
88CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]223010.000-0.0499No
89KRT33Bkeratin 33B [Source:HGNC Symbol;Acc:HGNC:6451]225480.000-0.0565No
90RBMY2FPRNA binding motif protein Y-linked family 2 member F, pseudogene [Source:HGNC Symbol;Acc:HGNC:23891]228420.000-0.0644No
91ANKRD36BP2ankyrin repeat domain 36B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:33607]229770.000-0.0681No
92NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]235250.000-0.0829No
93KCNJ16potassium inwardly rectifying channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]237360.000-0.0886No
94SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]240210.000-0.0962No
95SPACA1sperm acrosome associated 1 [Source:HGNC Symbol;Acc:HGNC:14967]240370.000-0.0966No
96KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]241030.000-0.0984No
97ALPPalkaline phosphatase, placental [Source:HGNC Symbol;Acc:HGNC:439]242220.000-0.1016No
98FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]242990.000-0.1037No
99ADGRD2adhesion G protein-coupled receptor D2 [Source:HGNC Symbol;Acc:HGNC:18651]243020.000-0.1037No
100CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]243830.000-0.1059No
101WNT16Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]246880.000-0.1141No
102ANO2anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]249590.000-0.1214No
103SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]253260.000-0.1313No
104OCA2OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]259190.000-0.1473No
105A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]268570.000-0.1727No
106FMO2flavin containing dimethylaniline monoxygenase 2 [Source:HGNC Symbol;Acc:HGNC:3770]270210.000-0.1771No
107STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]272520.000-0.1833No
108SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]27515-0.028-0.1900No
109TFPItissue factor pathway inhibitor [Source:HGNC Symbol;Acc:HGNC:11760]27608-0.046-0.1919No
110ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]27827-0.080-0.1966No
111HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]27843-0.082-0.1958No
112TAPT1transmembrane anterior posterior transformation 1 [Source:HGNC Symbol;Acc:HGNC:26887]27847-0.083-0.1948No
113KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]27975-0.099-0.1968No
114OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]29162-0.274-0.2250No
115STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]29500-0.326-0.2294No
116NDUFA4L2NDUFA4 mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]29796-0.367-0.2322No
117CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]30129-0.418-0.2352No
118COL9A3collagen type IX alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2219]30192-0.428-0.2308No
119CASS4Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]30413-0.462-0.2302No
120CFAP43cilia and flagella associated protein 43 [Source:HGNC Symbol;Acc:HGNC:26684]30659-0.504-0.2296No
121SAMD14sterile alpha motif domain containing 14 [Source:HGNC Symbol;Acc:HGNC:27312]30867-0.537-0.2276No
122LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]31335-0.618-0.2314No
123TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]31516-0.655-0.2269No
124H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]31644-0.678-0.2207No
125KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]32105-0.780-0.2220No
126GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]32393-0.863-0.2175No
127NFE2nuclear factor, erythroid 2 [Source:HGNC Symbol;Acc:HGNC:7780]32530-0.893-0.2085No
128KCNAB3potassium voltage-gated channel subfamily A regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6230]33025-1.042-0.2070No
129TMEM176Atransmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]33334-1.138-0.1991No
130GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]33667-1.255-0.1902No
131SCELsciellin [Source:HGNC Symbol;Acc:HGNC:10573]33811-1.307-0.1755No
132CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]34006-1.373-0.1612No
133S100A5S100 calcium binding protein A5 [Source:HGNC Symbol;Acc:HGNC:10495]34320-1.494-0.1483No
134PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]34848-1.720-0.1381No
135KIF24kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]35858-2.424-0.1309No
136CEACAM1CEA cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:1814]35980-2.530-0.0981No
137MYCNMYCN proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7559]36233-2.784-0.0653No
138LYL1LYL1 basic helix-loop-helix family member [Source:HGNC Symbol;Acc:HGNC:6734]36417-3.008-0.0274No
139KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36556-3.1990.0145No
Table: GSEA details [plain text format]



Fig 2: KRAS.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.BREAST_UP.V1_UP