Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetKRAS.LUNG.BREAST_UP.V1_UP
Enrichment Score (ES)0.59841746
Normalized Enrichment Score (NES)1.5764844
Nominal p-value0.0
FDR q-value0.05119339
FWER p-Value0.036
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]04.9950.0569Yes
2PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]44.9650.1133Yes
3CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]64.9510.1697Yes
4ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]184.8490.2246Yes
5TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]564.4350.2741Yes
6TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]1383.8420.3157Yes
7TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]1513.7290.3578Yes
8GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]2183.3260.3939Yes
9ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]3632.7240.4210Yes
10ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]3922.6400.4503Yes
11MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]4122.5690.4791Yes
12DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]4802.4060.5047Yes
13CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]4862.3980.5318Yes
14IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]9151.6760.5393Yes
15GPR4G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:4497]9181.6680.5583Yes
16IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]9671.6160.5754Yes
17POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]13131.3080.5809Yes
18HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]16001.1450.5862Yes
19SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]17571.0560.5940Yes
20DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]25710.7210.5802Yes
21OSBP2oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]25810.7180.5882Yes
22PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]27060.6740.5925Yes
23INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]27660.6610.5984Yes
24CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]36670.4460.5791No
25TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]37660.4290.5814No
26IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]38300.4160.5844No
27MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]39550.3860.5854No
28MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]43080.3160.5795No
29BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]48530.2090.5672No
30ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]50060.1770.5651No
31ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]52590.1390.5598No
32GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]56110.0700.5511No
33FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]57400.0460.5482No
34ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]59180.0070.5435No
35CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]60460.0000.5400No
36SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]61910.0000.5362No
37RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]68880.0000.5173No
38SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]69080.0000.5168No
39SHOXshort stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853]78100.0000.4924No
40CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]84100.0000.4762No
41CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]85220.0000.4732No
42TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]90740.0000.4583No
43ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]96400.0000.4430No
44FAM174Bfamily with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]101940.0000.4280No
45PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]106780.0000.4150No
46TFDP3transcription factor Dp family member 3 [Source:HGNC Symbol;Acc:HGNC:24603]108880.0000.4093No
47TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]112260.0000.4002No
48CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]113910.0000.3957No
49IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]114830.0000.3933No
50ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]115950.0000.3903No
51TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]124390.0000.3675No
52GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]125450.0000.3646No
53RBMXL2RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]128210.0000.3572No
54GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]129860.0000.3527No
55HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]130580.0000.3508No
56OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]133180.0000.3438No
57KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]135310.0000.3381No
58RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]136580.0000.3347No
59IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]136740.0000.3343No
60RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]137710.0000.3317No
61HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]142330.0000.3192No
62ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]146080.0000.3091No
63SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]152610.0000.2914No
64IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158220.0000.2763No
65AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]159250.0000.2735No
66MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]170850.0000.2421No
67GRPgastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]170870.0000.2421No
68SEMA3Bsemaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]178010.0000.2228No
69CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]178270.0000.2221No
70IGHV3-48immunoglobulin heavy variable 3-48 [Source:HGNC Symbol;Acc:HGNC:5606]181700.0000.2129No
71BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]190010.0000.1904No
72MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190320.0000.1896No
73NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]193070.0000.1822No
74CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]193710.0000.1805No
75CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]193800.0000.1803No
76CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]193820.0000.1802No
77CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193840.0000.1802No
78TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]196480.0000.1731No
79HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]197030.0000.1716No
80GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]199030.0000.1662No
81NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]199040.0000.1662No
82PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]200360.0000.1627No
83PRYPTPN13 like Y-linked [Source:HGNC Symbol;Acc:HGNC:14024]200430.0000.1625No
84MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]208350.0000.1411No
85KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]218330.0000.1141No
86CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]220410.0000.1085No
87RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]221280.0000.1062No
88NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]222620.0000.1026No
89CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]223010.0000.1016No
90CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]228890.0000.0857No
91NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]234420.0000.0708No
92SLC25A31solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]234440.0000.0707No
93NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]235250.0000.0686No
94TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]236300.0000.0658No
95SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]240210.0000.0552No
96KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]241030.0000.0530No
97DNAH9dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]242780.0000.0483No
98FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]242990.0000.0478No
99CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]243830.0000.0455No
100SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]245540.0000.0409No
101IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]245690.0000.0405No
102CHRNA2cholinergic receptor nicotinic alpha 2 subunit [Source:HGNC Symbol;Acc:HGNC:1956]246510.0000.0383No
103PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]249340.0000.0307No
104PRSS3serine protease 3 [Source:HGNC Symbol;Acc:HGNC:9486]251950.0000.0237No
105SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]253260.0000.0202No
106PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]254270.0000.0175No
107FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]257070.0000.0099No
108ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]262920.000-0.0059No
109A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]268570.000-0.0212No
110STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]272520.000-0.0318No
111SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]27515-0.028-0.0386No
112HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]27843-0.082-0.0465No
113CCR6C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]27970-0.099-0.0488No
114KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]27975-0.099-0.0478No
115HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]28492-0.176-0.0597No
116OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]29162-0.274-0.0747No
117G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]29237-0.287-0.0735No
118LAT2linker for activation of T cells family member 2 [Source:HGNC Symbol;Acc:HGNC:12749]29479-0.323-0.0763No
119RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]29505-0.328-0.0733No
120AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]29750-0.363-0.0757No
121CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]30129-0.418-0.0812No
122ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]30368-0.456-0.0825No
123KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]30864-0.537-0.0897No
124ITPKAinositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:HGNC:6178]31001-0.559-0.0871No
125LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]31316-0.614-0.0886No
126LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]31335-0.618-0.0820No
127RPS4Y1ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]31341-0.620-0.0751No
128CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]31357-0.624-0.0684No
129TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]31516-0.655-0.0652No
130NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]31569-0.664-0.0591No
131KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]32105-0.780-0.0646No
132GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]32393-0.863-0.0626No
133RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]33069-1.052-0.0689No
134ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]33261-1.116-0.0613No
135CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]34006-1.373-0.0658No
136SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]34249-1.466-0.0557No
137PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]34848-1.720-0.0523No
138KCNC1potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]35236-1.956-0.0405No
139CCDC181coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]35309-2.000-0.0197No
140ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]36204-2.756-0.0125No
141KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36556-3.1990.0145No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG.BREAST_UP.V1_UP