Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetKRAS.LUNG_UP.V1_UP
Enrichment Score (ES)0.4452725
Normalized Enrichment Score (NES)1.1860589
Nominal p-value0.025316456
FDR q-value0.16240266
FWER p-Value0.629
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]64.9510.0616Yes
2TNNT2troponin T2, cardiac type [Source:HGNC Symbol;Acc:HGNC:11949]284.7670.1204Yes
3BCL2A1BCL2 related protein A1 [Source:HGNC Symbol;Acc:HGNC:991]644.3770.1741Yes
4DCBLD2discoidin, CUB and LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:24627]1693.6230.2164Yes
5SLC6A4solute carrier family 6 member 4 [Source:HGNC Symbol;Acc:HGNC:11050]2013.4290.2583Yes
6C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]2483.1740.2967Yes
7ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]3632.7240.3275Yes
8NESnestin [Source:HGNC Symbol;Acc:HGNC:7756]8341.7750.3370Yes
9IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]9151.6760.3557Yes
10IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]9671.6160.3745Yes
11EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]12931.3170.3821Yes
12POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]13131.3080.3979Yes
13PRKG2protein kinase cGMP-dependent 2 [Source:HGNC Symbol;Acc:HGNC:9416]13491.2790.4129Yes
14IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]14741.2040.4245Yes
15HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]16001.1450.4354Yes
16SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]17571.0560.4444Yes
17SLC18A1solute carrier family 18 member A1 [Source:HGNC Symbol;Acc:HGNC:10934]21540.8730.4446Yes
18DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]25710.7210.4423Yes
19INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]27660.6610.4453Yes
20ZBTB48zinc finger and BTB domain containing 48 [Source:HGNC Symbol;Acc:HGNC:4930]35870.4610.4288No
21CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]36670.4460.4322No
22IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]38300.4160.4330No
23SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]39220.3940.4355No
24CYP4F8cytochrome P450 family 4 subfamily F member 8 [Source:HGNC Symbol;Acc:HGNC:2648]40870.3610.4356No
25MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]43080.3160.4335No
26FBXO4F-box protein 4 [Source:HGNC Symbol;Acc:HGNC:13583]45170.2740.4313No
27LAG3lymphocyte activating 3 [Source:HGNC Symbol;Acc:HGNC:6476]45450.2680.4339No
28GPR3G protein-coupled receptor 3 [Source:HGNC Symbol;Acc:HGNC:4484]46760.2410.4334No
29ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]50060.1770.4267No
30EGFL7EGF like domain multiple 7 [Source:HGNC Symbol;Acc:HGNC:20594]51970.1520.4235No
31ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]52590.1390.4236No
32ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]59180.0070.4059No
33CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]60460.0000.4024No
34SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]61910.0000.3985No
35CRYAAcrystallin alpha A [Source:HGNC Symbol;Acc:HGNC:2388]63170.0000.3951No
36ASGR2asialoglycoprotein receptor 2 [Source:HGNC Symbol;Acc:HGNC:743]66020.0000.3875No
37RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]68880.0000.3797No
38SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]69080.0000.3792No
39FRMD1FERM domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21240]81760.0000.3449No
40GRIP2glutamate receptor interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:23841]90350.0000.3217No
41TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]90740.0000.3207No
42CLEC4AC-type lectin domain family 4 member A [Source:HGNC Symbol;Acc:HGNC:13257]91730.0000.3180No
43NDNFneuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]92040.0000.3172No
44KCNA5potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224]94270.0000.3112No
45GRIN2Aglutamate ionotropic receptor NMDA type subunit 2A [Source:HGNC Symbol;Acc:HGNC:4585]100390.0000.2947No
46ADA2adenosine deaminase 2 [Source:HGNC Symbol;Acc:HGNC:1839]107610.0000.2752No
47CCT8L2chaperonin containing TCP1 subunit 8 like 2 [Source:HGNC Symbol;Acc:HGNC:15553]108470.0000.2729No
48N4BP2L2-IT2N4BPL2 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:25038]111300.0000.2652No
49TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]112260.0000.2627No
50PRG3proteoglycan 3, pro eosinophil major basic protein 2 [Source:HGNC Symbol;Acc:HGNC:9363]112320.0000.2625No
51NPHS1NPHS1 adhesion molecule, nephrin [Source:HGNC Symbol;Acc:HGNC:7908]113670.0000.2589No
52SLC6A11solute carrier family 6 member 11 [Source:HGNC Symbol;Acc:HGNC:11044]115470.0000.2541No
53GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]125450.0000.2271No
54PPP1R14Dprotein phosphatase 1 regulatory inhibitor subunit 14D [Source:HGNC Symbol;Acc:HGNC:14953]129070.0000.2173No
55HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]130580.0000.2133No
56LILRB1leukocyte immunoglobulin like receptor B1 [Source:HGNC Symbol;Acc:HGNC:6605]132800.0000.2073No
57OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]133180.0000.2063No
58KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]135310.0000.2005No
59RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]136580.0000.1971No
60RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]137710.0000.1941No
61HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]142330.0000.1816No
62RGS4regulator of G protein signaling 4 [Source:HGNC Symbol;Acc:HGNC:10000]145710.0000.1725No
63PAX4paired box 4 [Source:HGNC Symbol;Acc:HGNC:8618]146560.0000.1702No
64LRIG1leucine rich repeats and immunoglobulin like domains 1 [Source:HGNC Symbol;Acc:HGNC:17360]150080.0000.1607No
65ZNF749zinc finger protein 749 [Source:HGNC Symbol;Acc:HGNC:32783]154490.0000.1488No
66HTR75-hydroxytryptamine receptor 7 [Source:HGNC Symbol;Acc:HGNC:5302]154570.0000.1486No
67BTCbetacellulin [Source:HGNC Symbol;Acc:HGNC:1121]155710.0000.1456No
68FUT5fucosyltransferase 5 [Source:HGNC Symbol;Acc:HGNC:4016]176480.0000.0894No
69TAS2R1taste 2 receptor member 1 [Source:HGNC Symbol;Acc:HGNC:14909]179020.0000.0825No
70SEMG2semenogelin 2 [Source:HGNC Symbol;Acc:HGNC:10743]182310.0000.0737No
71MT3metallothionein 3 [Source:HGNC Symbol;Acc:HGNC:7408]189990.0000.0529No
72MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190320.0000.0520No
73NKX2-5NK2 homeobox 5 [Source:HGNC Symbol;Acc:HGNC:2488]191260.0000.0495No
74NGFnerve growth factor [Source:HGNC Symbol;Acc:HGNC:7808]192030.0000.0475No
75MIR124-1HGMIR124-1 host gene [Source:HGNC Symbol;Acc:HGNC:27231]193610.0000.0432No
76CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]193710.0000.0430No
77CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193840.0000.0426No
78TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]196480.0000.0355No
79ADAMTS3ADAM metallopeptidase with thrombospondin type 1 motif 3 [Source:HGNC Symbol;Acc:HGNC:219]199490.0000.0274No
80IGSF1immunoglobulin superfamily member 1 [Source:HGNC Symbol;Acc:HGNC:5948]206010.0000.0098No
81MMP20matrix metallopeptidase 20 [Source:HGNC Symbol;Acc:HGNC:7167]208200.0000.0039No
82SLC16A8solute carrier family 16 member 8 [Source:HGNC Symbol;Acc:HGNC:16270]212600.000-0.0080No
83KIR2DL3killer cell immunoglobulin like receptor, two Ig domains and long cytoplasmic tail 3 [Source:HGNC Symbol;Acc:HGNC:6331]214930.000-0.0143No
84NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]222620.000-0.0350No
85CYP2J2cytochrome P450 family 2 subfamily J member 2 [Source:HGNC Symbol;Acc:HGNC:2634]226130.000-0.0445No
86CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]228890.000-0.0520No
87CD48CD48 molecule [Source:HGNC Symbol;Acc:HGNC:1683]229500.000-0.0536No
88CD80CD80 molecule [Source:HGNC Symbol;Acc:HGNC:1700]230110.000-0.0552No
89CFAP69cilia and flagella associated protein 69 [Source:HGNC Symbol;Acc:HGNC:26107]232470.000-0.0616No
90DEFA5defensin alpha 5 [Source:HGNC Symbol;Acc:HGNC:2764]233650.000-0.0647No
91NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]234420.000-0.0668No
92TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]236300.000-0.0719No
93WNT7AWnt family member 7A [Source:HGNC Symbol;Acc:HGNC:12786]239800.000-0.0813No
94ADCYAP1R1ADCYAP receptor type I [Source:HGNC Symbol;Acc:HGNC:242]241230.000-0.0851No
95ALLCallantoicase [Source:HGNC Symbol;Acc:HGNC:17377]241720.000-0.0864No
96LINC00472long intergenic non-protein coding RNA 472 [Source:HGNC Symbol;Acc:HGNC:21380]245100.000-0.0956No
97IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]245690.000-0.0971No
98UGT1A10UDP glucuronosyltransferase family 1 member A10 [Source:HGNC Symbol;Acc:HGNC:12531]248110.000-0.1037No
99PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]249340.000-0.1070No
100ANO1anoctamin 1 [Source:HGNC Symbol;Acc:HGNC:21625]249620.000-0.1077No
101TEX13Atestis expressed 13A [Source:HGNC Symbol;Acc:HGNC:11735]250370.000-0.1097No
102SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]253260.000-0.1175No
103PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]254270.000-0.1202No
104FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]257070.000-0.1277No
105ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]262920.000-0.1435No
106MAGEA6MAGE family member A6 [Source:HGNC Symbol;Acc:HGNC:6804]265390.000-0.1502No
107TMEM238Ltransmembrane protein 238 like [Source:HGNC Symbol;Acc:HGNC:44356]266880.000-0.1542No
108CELA2Bchymotrypsin like elastase 2B [Source:HGNC Symbol;Acc:HGNC:29995]269380.000-0.1609No
109PCDH17protocadherin 17 [Source:HGNC Symbol;Acc:HGNC:14267]27571-0.037-0.1776No
110HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]28492-0.176-0.2003No
111G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]29237-0.287-0.2168No
112TMEM176Btransmembrane protein 176B [Source:HGNC Symbol;Acc:HGNC:29596]29368-0.306-0.2165No
113RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]29505-0.328-0.2161No
114AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]29750-0.363-0.2182No
115ZNF821zinc finger protein 821 [Source:HGNC Symbol;Acc:HGNC:28043]30783-0.523-0.2396No
116KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]30864-0.537-0.2351No
117B3GNTL1UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 [Source:HGNC Symbol;Acc:HGNC:21727]30973-0.553-0.2311No
118FABP3fatty acid binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3557]31205-0.596-0.2299No
119LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]31316-0.614-0.2253No
120NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]31569-0.664-0.2238No
121TMEM158transmembrane protein 158 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:30293]31983-0.750-0.2256No
122BANK1B cell scaffold protein with ankyrin repeats 1 [Source:HGNC Symbol;Acc:HGNC:18233]32066-0.771-0.2182No
123ZBTB44zinc finger and BTB domain containing 44 [Source:HGNC Symbol;Acc:HGNC:25001]32441-0.875-0.2174No
124CLSTN3calsyntenin 3 [Source:HGNC Symbol;Acc:HGNC:18371]32672-0.936-0.2120No
125HS3ST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]32791-0.971-0.2031No
126OGDHLoxoglutarate dehydrogenase like [Source:HGNC Symbol;Acc:HGNC:25590]32835-0.986-0.1920No
127CYTIPcytohesin 1 interacting protein [Source:HGNC Symbol;Acc:HGNC:9506]32991-1.035-0.1832No
128SDCCAG8SHH signaling and ciliogenesis regulator SDCCAG8 [Source:HGNC Symbol;Acc:HGNC:10671]33007-1.039-0.1707No
129RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]33069-1.052-0.1592No
130JAK3Janus kinase 3 [Source:HGNC Symbol;Acc:HGNC:6193]33160-1.081-0.1482No
131ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]33261-1.116-0.1370No
132DOCK2dedicator of cytokinesis 2 [Source:HGNC Symbol;Acc:HGNC:2988]33776-1.293-0.1348No
133SARM1sterile alpha and TIR motif containing 1 [Source:HGNC Symbol;Acc:HGNC:17074]34073-1.394-0.1254No
134SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]34249-1.466-0.1118No
135ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]34877-1.739-0.1071No
136AURKCaurora kinase C [Source:HGNC Symbol;Acc:HGNC:11391]35326-2.010-0.0942No
137NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]35623-2.214-0.0746No
138HROBhomologous recombination factor with OB-fold [Source:HGNC Symbol;Acc:HGNC:28460]36150-2.709-0.0551No
139ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]36204-2.756-0.0221No
140CX3CR1C-X3-C motif chemokine receptor 1 [Source:HGNC Symbol;Acc:HGNC:2558]36825-3.6960.0072No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG_UP.V1_UP