Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetSRC_UP.V1_DN
Enrichment Score (ES)-0.61725557
Normalized Enrichment Score (NES)-1.3151351
Nominal p-value0.012765957
FDR q-value0.17754382
FWER p-Value0.958
Table: GSEA Results Summary



Fig 1: Enrichment plot: SRC_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IFIT1interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407]174.8630.0326No
2SERPINB2serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]3962.6300.0403No
3ACSL4acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]5252.2910.0524No
4NFKBIENFKB inhibitor epsilon [Source:HGNC Symbol;Acc:HGNC:7799]6092.1310.0646No
5STARD3StAR related lipid transfer domain containing 3 [Source:HGNC Symbol;Acc:HGNC:17579]7751.8580.0728No
6POP1POP1 homolog, ribonuclease P/MRP subunit [Source:HGNC Symbol;Acc:HGNC:30129]13771.2600.0651No
7IRAK2interleukin 1 receptor associated kinase 2 [Source:HGNC Symbol;Acc:HGNC:6113]14161.2380.0725No
8COP1COP1 E3 ubiquitin ligase [Source:HGNC Symbol;Acc:HGNC:17440]14181.2370.0809No
9RRN3RRN3 homolog, RNA polymerase I transcription factor [Source:HGNC Symbol;Acc:HGNC:30346]20490.9230.0701No
10ZNF628zinc finger protein 628 [Source:HGNC Symbol;Acc:HGNC:28054]21050.8970.0747No
11GON7GON7 subunit of KEOPS complex [Source:HGNC Symbol;Acc:HGNC:20356]24380.7660.0710No
12POLR1ARNA polymerase I subunit A [Source:HGNC Symbol;Acc:HGNC:17264]25510.7270.0729No
13ZNF436zinc finger protein 436 [Source:HGNC Symbol;Acc:HGNC:20814]26490.6930.0750No
14IRX5iroquois homeobox 5 [Source:HGNC Symbol;Acc:HGNC:14361]27770.6570.0760No
15CMTR2cap methyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:25635]29670.6090.0750No
16ZNF3zinc finger protein 3 [Source:HGNC Symbol;Acc:HGNC:13089]30070.6010.0780No
17RAB33BRAB33B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:16075]30250.5970.0816No
18MYSM1Myb like, SWIRM and MPN domains 1 [Source:HGNC Symbol;Acc:HGNC:29401]30650.5890.0846No
19EIF3CLeukaryotic translation initiation factor 3 subunit C like [Source:HGNC Symbol;Acc:HGNC:26347]32130.5490.0844No
20SLC12A5solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]32320.5440.0876No
21PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]32670.5350.0903No
22TMEM14Atransmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]33530.5170.0915No
23DTWD1DTW domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30926]33570.5160.0949No
24MEGF6multiple EGF like domains 6 [Source:HGNC Symbol;Acc:HGNC:3232]35470.4700.0930No
25ADGRE1adhesion G protein-coupled receptor E1 [Source:HGNC Symbol;Acc:HGNC:3336]37120.4360.0915No
26FANCLFA complementation group L [Source:HGNC Symbol;Acc:HGNC:20748]40790.3620.0841No
27SLC2A6solute carrier family 2 member 6 [Source:HGNC Symbol;Acc:HGNC:11011]45540.2660.0731No
28MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]45730.2620.0744No
29ZNF782zinc finger protein 782 [Source:HGNC Symbol;Acc:HGNC:33110]47090.2340.0723No
30GDPD3glycerophosphodiester phosphodiesterase domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28638]49150.1960.0681No
31CHAC2ChaC glutathione specific gamma-glutamylcyclotransferase 2 [Source:HGNC Symbol;Acc:HGNC:32363]49450.1900.0686No
32ZNF451zinc finger protein 451 [Source:HGNC Symbol;Acc:HGNC:21091]51910.1540.0630No
33PPIL1peptidylprolyl isomerase like 1 [Source:HGNC Symbol;Acc:HGNC:9260]52170.1480.0633No
34ZNF721zinc finger protein 721 [Source:HGNC Symbol;Acc:HGNC:29425]52250.1460.0641No
35MON1AMON1 homolog A, secretory trafficking associated [Source:HGNC Symbol;Acc:HGNC:28207]58390.0230.0477No
36CENPScentromere protein S [Source:HGNC Symbol;Acc:HGNC:23163]58970.0110.0462No
37C11orf72chromosome 11 putative open reading frame 72 [Source:HGNC Symbol;Acc:HGNC:26915]60220.0000.0429No
38PRSS33serine protease 33 [Source:HGNC Symbol;Acc:HGNC:30405]60490.0000.0421No
39CWH43cell wall biogenesis 43 C-terminal homolog [Source:HGNC Symbol;Acc:HGNC:26133]65800.0000.0278No
40DGCR11DiGeorge syndrome critical region gene 11 [Source:HGNC Symbol;Acc:HGNC:17226]66910.0000.0248No
41ARSJarylsulfatase family member J [Source:HGNC Symbol;Acc:HGNC:26286]71110.0000.0135No
42DEPP1DEPP1 autophagy regulator [Source:HGNC Symbol;Acc:HGNC:23355]77450.000-0.0037No
43WT1-ASWT1 antisense RNA [Source:HGNC Symbol;Acc:HGNC:18135]77930.000-0.0050No
44S100A9S100 calcium binding protein A9 [Source:HGNC Symbol;Acc:HGNC:10499]81880.000-0.0156No
45SH3TC2SH3 domain and tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:29427]84220.000-0.0219No
46PRR19proline rich 19 [Source:HGNC Symbol;Acc:HGNC:33728]84560.000-0.0228No
47HOXB2homeobox B2 [Source:HGNC Symbol;Acc:HGNC:5113]84590.000-0.0229No
48NPY5Rneuropeptide Y receptor Y5 [Source:HGNC Symbol;Acc:HGNC:7958]87610.000-0.0310No
49GRID1glutamate ionotropic receptor delta type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4575]88900.000-0.0345No
50ZNF135zinc finger protein 135 [Source:HGNC Symbol;Acc:HGNC:12919]90950.000-0.0400No
51SPRR1Bsmall proline rich protein 1B [Source:HGNC Symbol;Acc:HGNC:11260]99070.000-0.0620No
52ADH4alcohol dehydrogenase 4 (class II), pi polypeptide [Source:HGNC Symbol;Acc:HGNC:252]108220.000-0.0867No
53GFRA3GDNF family receptor alpha 3 [Source:HGNC Symbol;Acc:HGNC:4245]109410.000-0.0899No
54EREGepiregulin [Source:HGNC Symbol;Acc:HGNC:3443]112110.000-0.0972No
55C17orf64chromosome 17 open reading frame 64 [Source:HGNC Symbol;Acc:HGNC:26990]114590.000-0.1039No
56LYPD3LY6/PLAUR domain containing 3 [Source:HGNC Symbol;Acc:HGNC:24880]117590.000-0.1120No
57LINC00842long intergenic non-protein coding RNA 842 [Source:HGNC Symbol;Acc:HGNC:44989]121280.000-0.1220No
58COBLcordon-bleu WH2 repeat protein [Source:HGNC Symbol;Acc:HGNC:22199]122040.000-0.1240No
59SPDYE1speedy/RINGO cell cycle regulator family member E1 [Source:HGNC Symbol;Acc:HGNC:16408]122320.000-0.1247No
60TGM5transglutaminase 5 [Source:HGNC Symbol;Acc:HGNC:11781]123560.000-0.1281No
61ZBED2zinc finger BED-type containing 2 [Source:HGNC Symbol;Acc:HGNC:20710]129270.000-0.1435No
62SYT15synaptotagmin 15 [Source:HGNC Symbol;Acc:HGNC:17167]135320.000-0.1599No
63MGARPmitochondria localized glutamic acid rich protein [Source:HGNC Symbol;Acc:HGNC:29969]135770.000-0.1611No
64NYNRINNYN domain and retroviral integrase containing [Source:HGNC Symbol;Acc:HGNC:20165]137910.000-0.1668No
65PIK3C2Gphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma [Source:HGNC Symbol;Acc:HGNC:8973]139230.000-0.1704No
66PIK3C2Bphosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta [Source:HGNC Symbol;Acc:HGNC:8972]139250.000-0.1704No
67PCDH19protocadherin 19 [Source:HGNC Symbol;Acc:HGNC:14270]144500.000-0.1846No
68TRIM73tripartite motif containing 73 [Source:HGNC Symbol;Acc:HGNC:18162]151250.000-0.2029No
69GJB6gap junction protein beta 6 [Source:HGNC Symbol;Acc:HGNC:4288]153640.000-0.2093No
70ZNF789zinc finger protein 789 [Source:HGNC Symbol;Acc:HGNC:27801]154060.000-0.2104No
71C8Bcomplement C8 beta chain [Source:HGNC Symbol;Acc:HGNC:1353]155980.000-0.2156No
72SLC7A14solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]161900.000-0.2316No
73EMBembigin [Source:HGNC Symbol;Acc:HGNC:30465]163300.000-0.2354No
74SYT1synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]169410.000-0.2519No
75IVLinvolucrin [Source:HGNC Symbol;Acc:HGNC:6187]177500.000-0.2738No
76GTF2H2general transcription factor IIH subunit 2 [Source:HGNC Symbol;Acc:HGNC:4656]177620.000-0.2741No
77S1PR3sphingosine-1-phosphate receptor 3 [Source:HGNC Symbol;Acc:HGNC:3167]179190.000-0.2783No
78DPYDdihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3012]180560.000-0.2820No
79MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]190320.000-0.3084No
80COL8A1collagen type VIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2215]192290.000-0.3137No
81CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]193840.000-0.3178No
82UTS2Rurotensin 2 receptor [Source:HGNC Symbol;Acc:HGNC:4468]205950.000-0.3506No
83IFI6interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054]206400.000-0.3518No
84MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]208350.000-0.3571No
85PHLDA2pleckstrin homology like domain family A member 2 [Source:HGNC Symbol;Acc:HGNC:12385]216940.000-0.3803No
86DISP2dispatched RND transporter family member 2 [Source:HGNC Symbol;Acc:HGNC:19712]236580.000-0.4335No
87CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]239820.000-0.4422No
88ADGRF1adhesion G protein-coupled receptor F1 [Source:HGNC Symbol;Acc:HGNC:18990]242610.000-0.4497No
89FAM153Afamily with sequence similarity 153 member A [Source:HGNC Symbol;Acc:HGNC:29940]242670.000-0.4499No
90CLCA4chloride channel accessory 4 [Source:HGNC Symbol;Acc:HGNC:2018]244470.000-0.4547No
91KCNMB3potassium calcium-activated channel subfamily M regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6287]247580.000-0.4631No
92ANHXanomalous homeobox [Source:HGNC Symbol;Acc:HGNC:40024]248990.000-0.4669No
93IFITM10interferon induced transmembrane protein 10 [Source:HGNC Symbol;Acc:HGNC:40022]249290.000-0.4677No
94ANO7anoctamin 7 [Source:HGNC Symbol;Acc:HGNC:31677]249510.000-0.4683No
95ATPSCKMTATP synthase c subunit lysine N-methyltransferase [Source:HGNC Symbol;Acc:HGNC:27029]265800.000-0.5124No
96NLRP8NLR family pyrin domain containing 8 [Source:HGNC Symbol;Acc:HGNC:22940]266370.000-0.5139No
97ST8SIA2ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:10870]268600.000-0.5199No
98PCDHB4protocadherin beta 4 [Source:HGNC Symbol;Acc:HGNC:8689]27807-0.078-0.5450No
99COQ4coenzyme Q4 [Source:HGNC Symbol;Acc:HGNC:19693]28013-0.105-0.5498No
100PAK3p21 (RAC1) activated kinase 3 [Source:HGNC Symbol;Acc:HGNC:8592]28115-0.121-0.5517No
101NOL12nucleolar protein 12 [Source:HGNC Symbol;Acc:HGNC:28585]28218-0.138-0.5536No
102CERKLceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]28248-0.142-0.5534No
103COMMD9COMM domain containing 9 [Source:HGNC Symbol;Acc:HGNC:25014]28459-0.172-0.5579No
104OTUD6BOTU deubiquitinase 6B [Source:HGNC Symbol;Acc:HGNC:24281]28471-0.174-0.5570No
105SPNS3sphingolipid transporter 3 (putative) [Source:HGNC Symbol;Acc:HGNC:28433]28529-0.182-0.5573No
106STK17Bserine/threonine kinase 17b [Source:HGNC Symbol;Acc:HGNC:11396]28628-0.192-0.5587No
107IRGCimmunity related GTPase cinema [Source:HGNC Symbol;Acc:HGNC:28835]29154-0.272-0.5710No
108IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]29779-0.366-0.5854No
109TREML1triggering receptor expressed on myeloid cells like 1 [Source:HGNC Symbol;Acc:HGNC:20434]29908-0.384-0.5863No
110TMCO2transmembrane and coiled-coil domains 2 [Source:HGNC Symbol;Acc:HGNC:23312]30023-0.401-0.5866No
111CSADcysteine sulfinic acid decarboxylase [Source:HGNC Symbol;Acc:HGNC:18966]30642-0.502-0.6000No
112ABHD3abhydrolase domain containing 3, phospholipase [Source:HGNC Symbol;Acc:HGNC:18718]30775-0.522-0.6000No
113PTGER4prostaglandin E receptor 4 [Source:HGNC Symbol;Acc:HGNC:9596]30924-0.546-0.6003No
114B3GNT3UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:13528]31194-0.594-0.6035No
115MIR17HGmiR-17-92a-1 cluster host gene [Source:HGNC Symbol;Acc:HGNC:23564]31392-0.631-0.6046No
116CDK11Bcyclin dependent kinase 11B [Source:HGNC Symbol;Acc:HGNC:1729]31446-0.641-0.6016No
117MN1MN1 proto-oncogene, transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:7180]31885-0.727-0.6086No
118KIAA1841KIAA1841 [Source:HGNC Symbol;Acc:HGNC:29387]32207-0.812-0.6117Yes
119CAPN12calpain 12 [Source:HGNC Symbol;Acc:HGNC:13249]32277-0.832-0.6079Yes
120CTDP1CTD phosphatase subunit 1 [Source:HGNC Symbol;Acc:HGNC:2498]32287-0.835-0.6025Yes
121WASH3PWASP family homolog 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:24362]32735-0.955-0.6081Yes
122HS3ST3A1heparan sulfate-glucosamine 3-sulfotransferase 3A1 [Source:HGNC Symbol;Acc:HGNC:5196]32791-0.971-0.6030Yes
123TMOD1tropomodulin 1 [Source:HGNC Symbol;Acc:HGNC:11871]33001-1.037-0.6016Yes
124CPPED1calcineurin like phosphoesterase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25632]33006-1.039-0.5946Yes
125DCAF17DDB1 and CUL4 associated factor 17 [Source:HGNC Symbol;Acc:HGNC:25784]33319-1.133-0.5954Yes
126RARAretinoic acid receptor alpha [Source:HGNC Symbol;Acc:HGNC:9864]33358-1.147-0.5886Yes
127ARL15ADP ribosylation factor like GTPase 15 [Source:HGNC Symbol;Acc:HGNC:25945]33560-1.215-0.5858Yes
128ACTL6Aactin like 6A [Source:HGNC Symbol;Acc:HGNC:24124]33575-1.221-0.5779Yes
129NBEAL1neurobeachin like 1 [Source:HGNC Symbol;Acc:HGNC:20681]33863-1.323-0.5766Yes
130CARNMT1carnosine N-methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23435]33892-1.332-0.5683Yes
131CA7carbonic anhydrase 7 [Source:HGNC Symbol;Acc:HGNC:1381]34117-1.410-0.5648Yes
132RNF168ring finger protein 168 [Source:HGNC Symbol;Acc:HGNC:26661]34143-1.426-0.5558Yes
133ARRDC3arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]34182-1.441-0.5470Yes
134PTBP2polypyrimidine tract binding protein 2 [Source:HGNC Symbol;Acc:HGNC:17662]34232-1.461-0.5384Yes
135RAP1ARAP1A, member of RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9855]34331-1.500-0.5308Yes
136SOAT1sterol O-acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:11177]34339-1.504-0.5208Yes
137TTC14tetratricopeptide repeat domain 14 [Source:HGNC Symbol;Acc:HGNC:24697]34440-1.541-0.5130Yes
138ADAadenosine deaminase [Source:HGNC Symbol;Acc:HGNC:186]34587-1.599-0.5061Yes
139MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34684-1.643-0.4975Yes
140RNF220ring finger protein 220 [Source:HGNC Symbol;Acc:HGNC:25552]34859-1.724-0.4905Yes
141GALNTL6polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]34932-1.768-0.4804Yes
142RTN4IP1reticulon 4 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:18647]35013-1.810-0.4703Yes
143MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35062-1.840-0.4591Yes
144PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]35101-1.865-0.4474Yes
145MAP3K6mitogen-activated protein kinase kinase kinase 6 [Source:HGNC Symbol;Acc:HGNC:6858]35598-2.198-0.4459Yes
146NRP1neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004]35623-2.214-0.4315Yes
147GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]35776-2.350-0.4196Yes
148MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35807-2.374-0.4043Yes
149SNX32sorting nexin 32 [Source:HGNC Symbol;Acc:HGNC:26423]35934-2.484-0.3908Yes
150EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]36065-2.624-0.3765Yes
151CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36076-2.633-0.3588Yes
152SUV39H2suppressor of variegation 3-9 homolog 2 [Source:HGNC Symbol;Acc:HGNC:17287]36092-2.643-0.3413Yes
153NID2nidogen 2 [Source:HGNC Symbol;Acc:HGNC:13389]36222-2.774-0.3259Yes
154LFNGLFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:HGNC Symbol;Acc:HGNC:6560]36302-2.848-0.3086Yes
155ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36303-2.848-0.2893Yes
156SEMA6Bsemaphorin 6B [Source:HGNC Symbol;Acc:HGNC:10739]36370-2.943-0.2710Yes
157UHRF1ubiquitin like with PHD and ring finger domains 1 [Source:HGNC Symbol;Acc:HGNC:12556]36415-3.003-0.2518Yes
158UNC119unc-119 lipid binding chaperone [Source:HGNC Symbol;Acc:HGNC:12565]36514-3.134-0.2331Yes
159RFTN1raftlin, lipid raft linker 1 [Source:HGNC Symbol;Acc:HGNC:30278]36538-3.177-0.2121Yes
160C1orf159chromosome 1 open reading frame 159 [Source:HGNC Symbol;Acc:HGNC:26062]36566-3.216-0.1910Yes
161LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]36576-3.229-0.1693Yes
162RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36654-3.353-0.1485Yes
163PCpyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]36732-3.477-0.1270Yes
164RCBTB2RCC1 and BTB domain containing protein 2 [Source:HGNC Symbol;Acc:HGNC:1914]36774-3.566-0.1038Yes
165SCRN2secernin 2 [Source:HGNC Symbol;Acc:HGNC:30381]36891-3.867-0.0807Yes
166E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36953-4.019-0.0550Yes
167FRMD4BFERM domain containing 4B [Source:HGNC Symbol;Acc:HGNC:24886]37004-4.228-0.0276Yes
168PKP2plakophilin 2 [Source:HGNC Symbol;Acc:HGNC:9024]37030-4.3890.0016Yes
Table: GSEA details [plain text format]



Fig 2: SRC_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: SRC_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for SRC_UP.V1_DN