Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetDESCARTES_FETAL_KIDNEY_MESANGIAL_CELLS
Enrichment Score (ES)0.6761346
Normalized Enrichment Score (NES)1.5820856
Nominal p-value0.011560693
FDR q-value0.085920416
FWER p-Value0.367
Table: GSEA Results Summary



Fig 1: Enrichment plot: DESCARTES_FETAL_KIDNEY_MESANGIAL_CELLS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1TNCtenascin C [Source:HGNC Symbol;Acc:HGNC:5318]24.9920.4739Yes
2ELOVL3ELOVL fatty acid elongase 3 [Source:HGNC Symbol;Acc:HGNC:18047]5292.2800.6761Yes
3SYNPO2synaptopodin 2 [Source:HGNC Symbol;Acc:HGNC:17732]33140.5250.6508No
4COL25A1collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]61150.0000.5752No
5LRRIQ1leucine rich repeats and IQ motif containing 1 [Source:HGNC Symbol;Acc:HGNC:25708]61690.0000.5737No
6FGF19fibroblast growth factor 19 [Source:HGNC Symbol;Acc:HGNC:3675]65530.0000.5634No
7PITX3paired like homeodomain 3 [Source:HGNC Symbol;Acc:HGNC:9006]69980.0000.5514No
8SHC3SHC adaptor protein 3 [Source:HGNC Symbol;Acc:HGNC:18181]77170.0000.5320No
9GRID2glutamate ionotropic receptor delta type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4576]88880.0000.5004No
10AGTR1angiotensin II receptor type 1 [Source:HGNC Symbol;Acc:HGNC:336]93700.0000.4874No
11AGTR2angiotensin II receptor type 2 [Source:HGNC Symbol;Acc:HGNC:338]93720.0000.4874No
12PITPNM3PITPNM family member 3 [Source:HGNC Symbol;Acc:HGNC:21043]96040.0000.4812No
13RMDN2-AS1RMDN2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41150]97560.0000.4771No
14CGB7chorionic gonadotropin subunit beta 7 [Source:HGNC Symbol;Acc:HGNC:16451]99820.0000.4710No
15IGLON5IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]100270.0000.4698No
16PGM5P4phosphoglucomutase 5 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:49605]102210.0000.4646No
17NKD1NKD inhibitor of WNT signaling pathway 1 [Source:HGNC Symbol;Acc:HGNC:17045]109620.0000.4446No
18NKD2NKD inhibitor of WNT signaling pathway 2 [Source:HGNC Symbol;Acc:HGNC:17046]109630.0000.4446No
19CCBE1collagen and calcium binding EGF domains 1 [Source:HGNC Symbol;Acc:HGNC:29426]110440.0000.4425No
20LINC00924long intergenic non-protein coding RNA 924 [Source:HGNC Symbol;Acc:HGNC:27081]119790.0000.4173No
21LINC02319long intergenic non-protein coding RNA 2319 [Source:HGNC Symbol;Acc:HGNC:53238]134380.0000.3779No
22RERGRAS like estrogen regulated growth inhibitor [Source:HGNC Symbol;Acc:HGNC:15980]137470.0000.3696No
23METTL24methyltransferase like 24 [Source:HGNC Symbol;Acc:HGNC:21566]147630.0000.3422No
24NKAIN2sodium/potassium transporting ATPase interacting 2 [Source:HGNC Symbol;Acc:HGNC:16443]155770.0000.3202No
25ENPP1ectonucleotide pyrophosphatase/phosphodiesterase 1 [Source:HGNC Symbol;Acc:HGNC:3356]156150.0000.3192No
26TBX22T-box transcription factor 22 [Source:HGNC Symbol;Acc:HGNC:11600]156650.0000.3179No
27BDNFbrain derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:1033]161360.0000.3052No
28SLC7A14solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]161900.0000.3038No
29PALLDpalladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068]166160.0000.2923No
30NDPnorrin cystine knot growth factor NDP [Source:HGNC Symbol;Acc:HGNC:7678]191890.0000.2229No
31COL8A1collagen type VIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2215]192290.0000.2218No
32GOT1L1glutamic-oxaloacetic transaminase 1 like 1 [Source:HGNC Symbol;Acc:HGNC:28487]201570.0000.1968No
33RENrenin [Source:HGNC Symbol;Acc:HGNC:9958]203960.0000.1904No
34TCF21transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11632]204090.0000.1900No
35LINC01914long intergenic non-protein coding RNA 1914 [Source:HGNC Symbol;Acc:HGNC:52733]207310.0000.1814No
36TYRP1tyrosinase related protein 1 [Source:HGNC Symbol;Acc:HGNC:12450]217570.0000.1537No
37CCN4cellular communication network factor 4 [Source:HGNC Symbol;Acc:HGNC:12769]228630.0000.1239No
38APCDD1APC down-regulated 1 [Source:HGNC Symbol;Acc:HGNC:15718]231150.0000.1171No
39FOXS1forkhead box S1 [Source:HGNC Symbol;Acc:HGNC:3735]232840.0000.1125No
40CPA6carboxypeptidase A6 [Source:HGNC Symbol;Acc:HGNC:17245]233450.0000.1109No
41LAMC3laminin subunit gamma 3 [Source:HGNC Symbol;Acc:HGNC:6494]235580.0000.1052No
42LAMA2laminin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6482]235800.0000.1046No
43RNU6-371PRNA, U6 small nuclear 371, pseudogene [Source:HGNC Symbol;Acc:HGNC:47334]237400.0000.1003No
44RARRES1retinoic acid receptor responder 1 [Source:HGNC Symbol;Acc:HGNC:9867]242180.0000.0875No
45MYOCDmyocardin [Source:HGNC Symbol;Acc:HGNC:16067]242450.0000.0868No
46ALX1ALX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1494]243280.0000.0845No
47INSYN2Ainhibitory synaptic factor 2A [Source:HGNC Symbol;Acc:HGNC:33859]250290.0000.0656No
48SLC6A1solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]259000.0000.0422No
49TMEFF2transmembrane protein with EGF like and two follistatin like domains 2 [Source:HGNC Symbol;Acc:HGNC:11867]28145-0.127-0.0064No
50PHACTR3phosphatase and actin regulator 3 [Source:HGNC Symbol;Acc:HGNC:15833]28642-0.195-0.0013No
51ATRNL1attractin like 1 [Source:HGNC Symbol;Acc:HGNC:29063]29763-0.3640.0030No
52KLHL13kelch like family member 13 [Source:HGNC Symbol;Acc:HGNC:22931]31209-0.5960.0206No
53GNG8G protein subunit gamma 8 [Source:HGNC Symbol;Acc:HGNC:19664]31661-0.6810.0732No
54SEZ6L2seizure related 6 homolog like 2 [Source:HGNC Symbol;Acc:HGNC:30844]32073-0.7730.1355No
Table: GSEA details [plain text format]



Fig 2: DESCARTES_FETAL_KIDNEY_MESANGIAL_CELLS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: DESCARTES_FETAL_KIDNEY_MESANGIAL_CELLS: Random ES distribution   
Gene set null distribution of ES for DESCARTES_FETAL_KIDNEY_MESANGIAL_CELLS