Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetDESCARTES_MAIN_FETAL_BIPOLAR_CELLS
Enrichment Score (ES)-0.76395434
Normalized Enrichment Score (NES)-1.5273465
Nominal p-value0.0
FDR q-value0.008406719
FWER p-Value0.18
Table: GSEA Results Summary



Fig 1: Enrichment plot: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1HSPA8P11heat shock protein family A (Hsp70) member 8 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:44926]28700.630-0.0481No
2GNL2P1G protein nucleolar 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:50779]38980.402-0.0571No
3CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]51030.162-0.0821No
4B3GLCTbeta 3-glucosyltransferase [Source:HGNC Symbol;Acc:HGNC:20207]59010.011-0.1031No
5PRICKLE2prickle planar cell polarity protein 2 [Source:HGNC Symbol;Acc:HGNC:20340]65180.000-0.1198No
6LINC01291long intergenic non-protein coding RNA 1291 [Source:HGNC Symbol;Acc:HGNC:50358]67670.000-0.1265No
7C15orf32chromosome 15 putative open reading frame 32 [Source:HGNC Symbol;Acc:HGNC:26549]68530.000-0.1288No
8LACTBL1lactamase beta like 1 [Source:HGNC Symbol;Acc:HGNC:35445]70610.000-0.1344No
9ARSHarylsulfatase family member H [Source:HGNC Symbol;Acc:HGNC:32488]71130.000-0.1358No
10ASIC4acid sensing ion channel subunit family member 4 [Source:HGNC Symbol;Acc:HGNC:21263]75680.000-0.1480No
11WASF3-AS1WASF3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:39841]79570.000-0.1585No
12TDRD6tudor domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21339]87500.000-0.1799No
13NRG1-IT3NRG1 intronic transcript 3 [Source:HGNC Symbol;Acc:HGNC:43635]87820.000-0.1808No
14NRG1-IT1NRG1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:43633]87880.000-0.1809No
15CACNA2D4calcium voltage-gated channel auxiliary subunit alpha2delta 4 [Source:HGNC Symbol;Acc:HGNC:20202]88060.000-0.1813No
16GRIK1glutamate ionotropic receptor kainate type subunit 1 [Source:HGNC Symbol;Acc:HGNC:4579]89820.000-0.1861No
17GUSBP4GUSB pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:18220]90840.000-0.1888No
18NFIBnuclear factor I B [Source:HGNC Symbol;Acc:HGNC:7785]97990.000-0.2081No
19GRIK1-AS1GRIK1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:16458]101810.000-0.2184No
20SERTM1serine rich and transmembrane domain containing 1 [Source:HGNC Symbol;Acc:HGNC:33792]103580.000-0.2231No
21ELSPBP1epididymal sperm binding protein 1 [Source:HGNC Symbol;Acc:HGNC:14417]103990.000-0.2242No
22ACKR1atypical chemokine receptor 1 (Duffy blood group) [Source:HGNC Symbol;Acc:HGNC:4035]108020.000-0.2351No
23AC023136.1novel transcript108450.000-0.2362No
24NYAP2neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 2 [Source:HGNC Symbol;Acc:HGNC:29291]110640.000-0.2421No
25AP001150.1novel transcript, antisense to POU2F3118360.000-0.2629No
26LHX4LIM homeobox 4 [Source:HGNC Symbol;Acc:HGNC:21734]121840.000-0.2723No
27MACROD2-IT1MACROD2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:16201]127100.000-0.2865No
28GS1-279B7.1microtubule associated protein 1 light chain 3 beta pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288079]127560.000-0.2877No
29GLRA1glycine receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4326]127720.000-0.2881No
30TMEM196transmembrane protein 196 [Source:HGNC Symbol;Acc:HGNC:22431]130340.000-0.2952No
31TRMT9BtRNA methyltransferase 9B (putative) [Source:HGNC Symbol;Acc:HGNC:26725]131310.000-0.2978No
32LINC02224long intergenic non-protein coding RNA 2224 [Source:HGNC Symbol;Acc:HGNC:53093]136390.000-0.3115No
33TMEM215transmembrane protein 215 [Source:HGNC Symbol;Acc:HGNC:33816]137630.000-0.3148No
34ZNF804Bzinc finger protein 804B [Source:HGNC Symbol;Acc:HGNC:21958]137800.000-0.3152No
35TAFA4TAFA chemokine like family member 4 [Source:HGNC Symbol;Acc:HGNC:21591]139660.000-0.3202No
36VSX1visual system homeobox 1 [Source:HGNC Symbol;Acc:HGNC:12723]144820.000-0.3341No
37VSX2visual system homeobox 2 [Source:HGNC Symbol;Acc:HGNC:1975]144840.000-0.3342No
38SV2Bsynaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]156640.000-0.3660No
39RSF1-IT2RSF1 intronic transcript 2 [Source:HGNC Symbol;Acc:HGNC:41438]158780.000-0.3718No
40KRT8P15keratin 8 pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:33367]163250.000-0.3838No
41FEZF2FEZ family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:13506]185750.000-0.4446No
42CDH20cadherin 20 [Source:HGNC Symbol;Acc:HGNC:1760]186180.000-0.4457No
43LINC01896long intergenic non-protein coding RNA 1896 [Source:HGNC Symbol;Acc:HGNC:52715]196260.000-0.4730No
44AC005746.2novel transcript, antisense to BCAS3196590.000-0.4738No
45LINC01750long intergenic non-protein coding RNA 1750 [Source:HGNC Symbol;Acc:HGNC:52538]197880.000-0.4773No
46GABRB3gamma-aminobutyric acid type A receptor subunit beta3 [Source:HGNC Symbol;Acc:HGNC:4083]198540.000-0.4790No
47TRPC7transient receptor potential cation channel subfamily C member 7 [Source:HGNC Symbol;Acc:HGNC:20754]199690.000-0.4821No
48GABRR3gamma-aminobutyric acid type A receptor subunit rho3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:17969]200380.000-0.4839No
49GABRR1gamma-aminobutyric acid type A receptor subunit rho1 [Source:HGNC Symbol;Acc:HGNC:4090]200410.000-0.4840No
50LINC01933long intergenic non-protein coding RNA 1933 [Source:HGNC Symbol;Acc:HGNC:52756]204630.000-0.4954No
51RN7SL83PRNA, 7SL, cytoplasmic 83, pseudogene [Source:HGNC Symbol;Acc:HGNC:46099]205860.000-0.4987No
52TRPC7-AS2TRPC7 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40937]212230.000-0.5159No
53MACROD2-AS1MACROD2 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:37193]214000.000-0.5206No
54ZNF385Bzinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]215400.000-0.5244No
55CA10carbonic anhydrase 10 [Source:HGNC Symbol;Acc:HGNC:1369]218640.000-0.5331No
56TMEM132Etransmembrane protein 132E [Source:HGNC Symbol;Acc:HGNC:26991]224410.000-0.5487No
57MIR3671microRNA 3671 [Source:HGNC Symbol;Acc:HGNC:38925]225100.000-0.5505No
58DSCAM-IT1DSCAM intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41327]225620.000-0.5519No
59ZNF223zinc finger protein 223 [Source:HGNC Symbol;Acc:HGNC:13016]227190.000-0.5561No
60RNU6-116PRNA, U6 small nuclear 116, pseudogene [Source:HGNC Symbol;Acc:HGNC:47079]236250.000-0.5805No
61NRG1neuregulin 1 [Source:HGNC Symbol;Acc:HGNC:7997]240380.000-0.5917No
62NCKAP5NCK associated protein 5 [Source:HGNC Symbol;Acc:HGNC:29847]243080.000-0.5989No
63LINC00469long intergenic non-protein coding RNA 469 [Source:HGNC Symbol;Acc:HGNC:26863]245150.000-0.6045No
64CABP2calcium binding protein 2 [Source:HGNC Symbol;Acc:HGNC:1385]246600.000-0.6084No
65RN7SL754PRNA, 7SL, cytoplasmic 754, pseudogene [Source:HGNC Symbol;Acc:HGNC:46770]257560.000-0.6380No
66AC004835.1novel transcript267600.000-0.6651No
67BSPH1binder of sperm protein homolog 1 [Source:HGNC Symbol;Acc:HGNC:33906]269780.000-0.6710No
68MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]272590.000-0.6785No
69DSCAMDS cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:3039]273240.000-0.6803No
70FSTL5follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386]28084-0.117-0.6953No
71MACROD2mono-ADP ribosylhydrolase 2 [Source:HGNC Symbol;Acc:HGNC:16126]28250-0.143-0.6931No
72LRRC1leucine rich repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:14307]28753-0.212-0.6968No
73ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]31202-0.596-0.7351Yes
74KCTD6potassium channel tetramerization domain containing 6 [Source:HGNC Symbol;Acc:HGNC:22235]32270-0.831-0.7252Yes
75CRYBG3crystallin beta-gamma domain containing 3 [Source:HGNC Symbol;Acc:HGNC:34427]32383-0.860-0.6881Yes
76CADPScalcium dependent secretion activator [Source:HGNC Symbol;Acc:HGNC:1426]33103-1.063-0.6579Yes
77GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]33667-1.255-0.6145Yes
78C3orf70chromosome 3 open reading frame 70 [Source:HGNC Symbol;Acc:HGNC:33731]35848-2.418-0.5605Yes
79HCN2hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 [Source:HGNC Symbol;Acc:HGNC:4846]36041-2.593-0.4446Yes
80FAM234Bfamily with sequence similarity 234 member B [Source:HGNC Symbol;Acc:HGNC:29288]36170-2.723-0.3209Yes
81AIMP1P1aminoacyl tRNA synthetase complex interacting multifunctional protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:16543]36674-3.386-0.1764Yes
82AGAP1ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:HGNC Symbol;Acc:HGNC:16922]36952-4.0190.0037Yes
Table: GSEA details [plain text format]



Fig 2: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: DESCARTES_MAIN_FETAL_BIPOLAR_CELLS: Random ES distribution   
Gene set null distribution of ES for DESCARTES_MAIN_FETAL_BIPOLAR_CELLS