Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetDURANTE_ADULT_OLFACTORY_NEUROEPITHELIUM_MAST_CELLS
Enrichment Score (ES)0.63868827
Normalized Enrichment Score (NES)1.5820361
Nominal p-value0.0
FDR q-value0.08114705
FWER p-Value0.367
Table: GSEA Results Summary



Fig 1: Enrichment plot: DURANTE_ADULT_OLFACTORY_NEUROEPITHELIUM_MAST_CELLS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]04.9950.0416Yes
2HDChistidine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4855]34.9760.0830Yes
3PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]44.9650.1243Yes
4NFKBIZNFKB inhibitor zeta [Source:HGNC Symbol;Acc:HGNC:29805]234.7870.1637Yes
5CCL4C-C motif chemokine ligand 4 [Source:HGNC Symbol;Acc:HGNC:10630]264.7680.2034Yes
6DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]304.7380.2427Yes
7CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]1093.9800.2738Yes
8CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]1283.9020.3058Yes
9NR4A2nuclear receptor subfamily 4 group A member 2 [Source:HGNC Symbol;Acc:HGNC:7981]1503.7330.3363Yes
10TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]1513.7290.3673Yes
11NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]1593.6630.3977Yes
12CREMcAMP responsive element modulator [Source:HGNC Symbol;Acc:HGNC:2352]1893.5270.4262Yes
13RGS1regulator of G protein signaling 1 [Source:HGNC Symbol;Acc:HGNC:9991]2253.2940.4527Yes
14CD44CD44 molecule (Indian blood group) [Source:HGNC Symbol;Acc:HGNC:1681]2413.2110.4791Yes
15SRGNserglycin [Source:HGNC Symbol;Acc:HGNC:9361]2643.1200.5044Yes
16SOCS1suppressor of cytokine signaling 1 [Source:HGNC Symbol;Acc:HGNC:19383]3712.7050.5241Yes
17ACSL4acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]5252.2910.5391Yes
18PLIN2perilipin 2 [Source:HGNC Symbol;Acc:HGNC:248]5692.1890.5561Yes
19NR4A3nuclear receptor subfamily 4 group A member 3 [Source:HGNC Symbol;Acc:HGNC:7982]7571.8820.5667Yes
20IER2immediate early response 2 [Source:HGNC Symbol;Acc:HGNC:28871]8291.7800.5796Yes
21IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]9151.6760.5913Yes
22RAC2Rac family small GTPase 2 [Source:HGNC Symbol;Acc:HGNC:9802]10441.5260.6006Yes
23FCER1GFc fragment of IgE receptor Ig [Source:HGNC Symbol;Acc:HGNC:3611]11151.4530.6108Yes
24CKLFchemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]12161.3780.6195Yes
25SAMSN1SAM domain, SH3 domain and nuclear localization signals 1 [Source:HGNC Symbol;Acc:HGNC:10528]13391.2870.6270Yes
26FTH1ferritin heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:3976]13681.2660.6368Yes
27PPP1R15Aprotein phosphatase 1 regulatory subunit 15A [Source:HGNC Symbol;Acc:HGNC:14375]18541.0140.6321Yes
28STX3syntaxin 3 [Source:HGNC Symbol;Acc:HGNC:11438]22180.8490.6294Yes
29SGK1serum/glucocorticoid regulated kinase 1 [Source:HGNC Symbol;Acc:HGNC:10810]22500.8370.6355Yes
30CAPGcapping actin protein, gelsolin like [Source:HGNC Symbol;Acc:HGNC:1474]23760.7900.6387Yes
31SELENOKselenoprotein K [Source:HGNC Symbol;Acc:HGNC:30394]28550.6350.6311No
32SDCBPsyndecan binding protein [Source:HGNC Symbol;Acc:HGNC:10662]29860.6050.6326No
33DDIT4DNA damage inducible transcript 4 [Source:HGNC Symbol;Acc:HGNC:24944]45100.2770.5937No
34GATA2GATA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4171]45140.2750.5960No
35LAPTM4Alysosomal protein transmembrane 4 alpha [Source:HGNC Symbol;Acc:HGNC:6924]46800.2400.5935No
36DNAJB1DnaJ heat shock protein family (Hsp40) member B1 [Source:HGNC Symbol;Acc:HGNC:5270]47620.2280.5932No
37BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]48530.2090.5925No
38AREGamphiregulin [Source:HGNC Symbol;Acc:HGNC:651]69430.0000.5361No
39FCER1AFc fragment of IgE receptor Ia [Source:HGNC Symbol;Acc:HGNC:3609]95990.0000.4644No
40RAB27BRAB27B, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9767]106770.0000.4353No
41MS4A2membrane spanning 4-domains A2 [Source:HGNC Symbol;Acc:HGNC:7316]107850.0000.4324No
42HSPA1Bheat shock protein family A (Hsp70) member 1B [Source:HGNC Symbol;Acc:HGNC:5233]114650.0000.4140No
43TPSB2tryptase beta 2 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:14120]141320.0000.3420No
44RHEXregulator of hemoglobinization and erythroid cell expansion [Source:HGNC Symbol;Acc:HGNC:25341]147280.0000.3259No
45SLC18A2solute carrier family 18 member A2 [Source:HGNC Symbol;Acc:HGNC:10935]150740.0000.3166No
46RGS13regulator of G protein signaling 13 [Source:HGNC Symbol;Acc:HGNC:9995]166210.0000.2749No
47KITKIT proto-oncogene, receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6342]182200.0000.2317No
48ZNF331zinc finger protein 331 [Source:HGNC Symbol;Acc:HGNC:15489]223960.0000.1189No
49CCL2C-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:10618]228360.0000.1070No
50CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]230060.0000.1025No
51CPA3carboxypeptidase A3 [Source:HGNC Symbol;Acc:HGNC:2298]233170.0000.0941No
52CAVIN2caveolae associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10690]235090.0000.0889No
53AL157895.1novel transcript, antisense to C10orf112236750.0000.0845No
54TPSAB1tryptase alpha/beta 1 [Source:HGNC Symbol;Acc:HGNC:12019]239340.0000.0775No
55CTSGcathepsin G [Source:HGNC Symbol;Acc:HGNC:2532]249420.0000.0503No
56PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]255270.0000.0345No
57VWA5Avon Willebrand factor A domain containing 5A [Source:HGNC Symbol;Acc:HGNC:6658]29458-0.320-0.0690No
58EMP3epithelial membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:3335]29680-0.351-0.0720No
59MAOBmonoamine oxidase B [Source:HGNC Symbol;Acc:HGNC:6834]30301-0.446-0.0851No
60LMO4LIM domain only 4 [Source:HGNC Symbol;Acc:HGNC:6644]30604-0.495-0.0891No
61ELF1E74 like ETS transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3316]30789-0.524-0.0897No
62SLC45A3solute carrier family 45 member 3 [Source:HGNC Symbol;Acc:HGNC:8642]30843-0.533-0.0867No
63CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]31357-0.624-0.0954No
64RGS2regulator of G protein signaling 2 [Source:HGNC Symbol;Acc:HGNC:9998]32048-0.767-0.1076No
65DUSP6dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:HGNC:3072]32246-0.823-0.1061No
66EGR3early growth response 3 [Source:HGNC Symbol;Acc:HGNC:3240]32477-0.881-0.1050No
67GPR65G protein-coupled receptor 65 [Source:HGNC Symbol;Acc:HGNC:4517]32526-0.892-0.0988No
68TYROBPtransmembrane immune signaling adaptor TYROBP [Source:HGNC Symbol;Acc:HGNC:12449]34546-1.577-0.1402No
69ANKRD28ankyrin repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29024]34891-1.747-0.1350No
70HPGDShematopoietic prostaglandin D synthase [Source:HGNC Symbol;Acc:HGNC:17890]36087-2.639-0.1453No
71ARHGAP18Rho GTPase activating protein 18 [Source:HGNC Symbol;Acc:HGNC:21035]36860-3.791-0.1346No
72ALOX5AParachidonate 5-lipoxygenase activating protein [Source:HGNC Symbol;Acc:HGNC:436]36877-3.832-0.1031No
73HPGD15-hydroxyprostaglandin dehydrogenase [Source:HGNC Symbol;Acc:HGNC:5154]36882-3.843-0.0712No
74LTC4Sleukotriene C4 synthase [Source:HGNC Symbol;Acc:HGNC:6719]37062-4.607-0.0377No
75ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]37064-4.6100.0007No
Table: GSEA details [plain text format]



Fig 2: DURANTE_ADULT_OLFACTORY_NEUROEPITHELIUM_MAST_CELLS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: DURANTE_ADULT_OLFACTORY_NEUROEPITHELIUM_MAST_CELLS: Random ES distribution   
Gene set null distribution of ES for DURANTE_ADULT_OLFACTORY_NEUROEPITHELIUM_MAST_CELLS