Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetFAN_EMBRYONIC_CTX_MICROGLIA_1
Enrichment Score (ES)-0.85900885
Normalized Enrichment Score (NES)-1.8348048
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: FAN_EMBRYONIC_CTX_MICROGLIA_1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CDK2AP2cyclin dependent kinase 2 associated protein 2 [Source:HGNC Symbol;Acc:HGNC:30833]6462.056-0.0118No
2CKLFchemokine like factor [Source:HGNC Symbol;Acc:HGNC:13253]12161.378-0.0233No
3RHEBRas homolog, mTORC1 binding [Source:HGNC Symbol;Acc:HGNC:10011]12321.367-0.0199No
4EVI2Becotropic viral integration site 2B [Source:HGNC Symbol;Acc:HGNC:3500]16971.093-0.0294No
5CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]24280.770-0.0471No
6CENPWcentromere protein W [Source:HGNC Symbol;Acc:HGNC:21488]31610.563-0.0653No
7SRSF3serine and arginine rich splicing factor 3 [Source:HGNC Symbol;Acc:HGNC:10785]32380.542-0.0658No
8DDX39ADExD-box helicase 39A [Source:HGNC Symbol;Acc:HGNC:17821]33660.514-0.0679No
9SRSF10serine and arginine rich splicing factor 10 [Source:HGNC Symbol;Acc:HGNC:16713]45600.265-0.0994No
10RPS27Lribosomal protein S27 like [Source:HGNC Symbol;Acc:HGNC:18476]57910.034-0.1326No
11H4C3H4 clustered histone 3 [Source:HGNC Symbol;Acc:HGNC:4787]98740.000-0.2431No
12C21orf58chromosome 21 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:1300]104490.000-0.2587No
13AC091057.1OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637]126490.000-0.3182No
14HERC5HECT and RLD domain containing E3 ubiquitin protein ligase 5 [Source:HGNC Symbol;Acc:HGNC:24368]196620.000-0.5081No
15H1-3H1.3 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4717]226730.000-0.5895No
16ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]260190.000-0.6801No
17GGHgamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]27673-0.057-0.7247No
18ITGB3BPintegrin subunit beta 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6157]28098-0.120-0.7358No
19CDC27cell division cycle 27 [Source:HGNC Symbol;Acc:HGNC:1728]28645-0.195-0.7501No
20HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]29749-0.363-0.7789No
21ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]29854-0.377-0.7807No
22PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]30719-0.514-0.8027No
23ANAPC11anaphase promoting complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:14452]31020-0.562-0.8092No
24H2AC17H2A clustered histone 17 [Source:HGNC Symbol;Acc:HGNC:4735]31166-0.589-0.8115No
25NUCKS1nuclear casein kinase and cyclin dependent kinase substrate 1 [Source:HGNC Symbol;Acc:HGNC:29923]31198-0.596-0.8107No
26CENPCcentromere protein C [Source:HGNC Symbol;Acc:HGNC:1854]31716-0.693-0.8228No
27POLQDNA polymerase theta [Source:HGNC Symbol;Acc:HGNC:9186]31932-0.738-0.8265No
28MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]32109-0.782-0.8291No
29PHF19PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]32318-0.842-0.8324No
30PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32753-0.958-0.8415No
31BUB3BUB3 mitotic checkpoint protein [Source:HGNC Symbol;Acc:HGNC:1151]32897-1.007-0.8425No
32FAM111Afamily with sequence similarity 111 member A [Source:HGNC Symbol;Acc:HGNC:24725]33488-1.187-0.8552No
33CNTRLcentriolin [Source:HGNC Symbol;Acc:HGNC:1858]33630-1.240-0.8556Yes
34TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]33741-1.280-0.8550Yes
35TROAPtrophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]33756-1.284-0.8518Yes
36DIAPH3diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]33930-1.347-0.8527Yes
37DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]34013-1.377-0.8511Yes
38GLAgalactosidase alpha [Source:HGNC Symbol;Acc:HGNC:4296]34042-1.383-0.8480Yes
39CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]34146-1.427-0.8468Yes
40CENPUcentromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]34297-1.486-0.8467Yes
41HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34312-1.491-0.8429Yes
42KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]34335-1.502-0.8393Yes
43CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]34381-1.518-0.8363Yes
44PRR11proline rich 11 [Source:HGNC Symbol;Acc:HGNC:25619]34678-1.641-0.8398Yes
45ARL6IP1ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:697]34754-1.676-0.8371Yes
46MRPL18mitochondrial ribosomal protein L18 [Source:HGNC Symbol;Acc:HGNC:14477]34823-1.707-0.8342Yes
47FANCD2FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]34824-1.707-0.8294Yes
48PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]34837-1.712-0.8250Yes
49CEP152centrosomal protein 152 [Source:HGNC Symbol;Acc:HGNC:29298]34926-1.765-0.8225Yes
50SMC1Astructural maintenance of chromosomes 1A [Source:HGNC Symbol;Acc:HGNC:11111]34943-1.772-0.8180Yes
51H2AZ1H2A.Z variant histone 1 [Source:HGNC Symbol;Acc:HGNC:4741]34958-1.777-0.8134Yes
52HP1BP3heterochromatin protein 1 binding protein 3 [Source:HGNC Symbol;Acc:HGNC:24973]34984-1.797-0.8091Yes
53PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]35101-1.865-0.8070Yes
54MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35138-1.892-0.8027Yes
55SGO1shugoshin 1 [Source:HGNC Symbol;Acc:HGNC:25088]35148-1.896-0.7977Yes
56DEKDEK proto-oncogene [Source:HGNC Symbol;Acc:HGNC:2768]35153-1.902-0.7925Yes
57MXD3MAX dimerization protein 3 [Source:HGNC Symbol;Acc:HGNC:14008]35272-1.975-0.7901Yes
58RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]35318-2.003-0.7858Yes
59CENPNcentromere protein N [Source:HGNC Symbol;Acc:HGNC:30873]35359-2.031-0.7812Yes
60AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]35380-2.050-0.7760Yes
61KIF20Bkinesin family member 20B [Source:HGNC Symbol;Acc:HGNC:7212]35390-2.057-0.7705Yes
62CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]35407-2.067-0.7652Yes
63CKAP5cytoskeleton associated protein 5 [Source:HGNC Symbol;Acc:HGNC:28959]35408-2.067-0.7595Yes
64RAD21RAD21 cohesin complex component [Source:HGNC Symbol;Acc:HGNC:9811]35457-2.101-0.7549Yes
65MZT1mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]35512-2.133-0.7504Yes
66KNSTRNkinetochore localized astrin (SPAG5) binding protein [Source:HGNC Symbol;Acc:HGNC:30767]35554-2.163-0.7455Yes
67CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]35605-2.200-0.7407Yes
68CENPMcentromere protein M [Source:HGNC Symbol;Acc:HGNC:18352]35632-2.222-0.7352Yes
69TTF2transcription termination factor 2 [Source:HGNC Symbol;Acc:HGNC:12398]35740-2.320-0.7317Yes
70SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35759-2.331-0.7256Yes
71CITcitron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]35787-2.355-0.7198Yes
72CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35813-2.385-0.7138Yes
73GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]35880-2.445-0.7088Yes
74DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]35888-2.450-0.7022Yes
75SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]35933-2.484-0.6964Yes
76TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35941-2.490-0.6897Yes
77CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]35978-2.530-0.6836Yes
78DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35981-2.530-0.6766Yes
79CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35993-2.546-0.6698Yes
80TUBA1Ctubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]36052-2.607-0.6641Yes
81EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]36065-2.624-0.6571Yes
82PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]36068-2.625-0.6499Yes
83TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]36069-2.626-0.6426Yes
84CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]36083-2.637-0.6356Yes
85NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]36122-2.676-0.6291Yes
86SIVA1SIVA1 apoptosis inducing factor [Source:HGNC Symbol;Acc:HGNC:17712]36123-2.679-0.6217Yes
87MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36125-2.680-0.6142Yes
88CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]36138-2.694-0.6070Yes
89ESPL1extra spindle pole bodies like 1, separase [Source:HGNC Symbol;Acc:HGNC:16856]36139-2.694-0.5995Yes
90HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36191-2.745-0.5933Yes
91SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]36199-2.753-0.5858Yes
92SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]36224-2.775-0.5787Yes
93BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36239-2.787-0.5713Yes
94ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]36251-2.795-0.5638Yes
95KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36255-2.798-0.5561Yes
96FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]36281-2.827-0.5489Yes
97ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]36284-2.829-0.5410Yes
98ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36303-2.848-0.5336Yes
99NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]36342-2.919-0.5265Yes
100UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36357-2.930-0.5187Yes
101CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36367-2.940-0.5108Yes
102FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]36390-2.970-0.5031Yes
103SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]36391-2.970-0.4948Yes
104KNL1kinetochore scaffold 1 [Source:HGNC Symbol;Acc:HGNC:24054]36396-2.980-0.4866Yes
105CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36421-3.011-0.4788Yes
106KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]36430-3.020-0.4706Yes
107ATAD5ATPase family AAA domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25752]36431-3.025-0.4622Yes
108MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36439-3.036-0.4539Yes
109H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36457-3.057-0.4459Yes
110BARD1BRCA1 associated RING domain 1 [Source:HGNC Symbol;Acc:HGNC:952]36458-3.059-0.4374Yes
111TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36461-3.062-0.4289Yes
112SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]36473-3.076-0.4206Yes
113UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36476-3.083-0.4121Yes
114PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36502-3.111-0.4041Yes
115CCNFcyclin F [Source:HGNC Symbol;Acc:HGNC:1591]36511-3.130-0.3956Yes
116IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]36519-3.139-0.3870Yes
117NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36546-3.187-0.3788Yes
118TMEM106Ctransmembrane protein 106C [Source:HGNC Symbol;Acc:HGNC:28775]36562-3.211-0.3703Yes
119KIF23kinesin family member 23 [Source:HGNC Symbol;Acc:HGNC:6392]36599-3.262-0.3622Yes
120TCF19transcription factor 19 [Source:HGNC Symbol;Acc:HGNC:11629]36613-3.282-0.3534Yes
121TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]36629-3.321-0.3445Yes
122ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36634-3.330-0.3353Yes
123PIMREGPICALM interacting mitotic regulator [Source:HGNC Symbol;Acc:HGNC:25483]36650-3.347-0.3264Yes
124KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]36655-3.354-0.3172Yes
125CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]36656-3.362-0.3078Yes
126CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36660-3.369-0.2985Yes
127CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36664-3.374-0.2892Yes
128NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36691-3.417-0.2804Yes
129AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36698-3.424-0.2710Yes
130KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36700-3.426-0.2614Yes
131BRCA2BRCA2 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1101]36707-3.439-0.2520Yes
132KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36709-3.440-0.2425Yes
133KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36710-3.442-0.2329Yes
134KIF15kinesin family member 15 [Source:HGNC Symbol;Acc:HGNC:17273]36755-3.524-0.2242Yes
135BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36780-3.580-0.2149Yes
136NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36802-3.632-0.2054Yes
137KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36808-3.649-0.1953Yes
138CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]36812-3.660-0.1852Yes
139PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36817-3.672-0.1751Yes
140NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36827-3.702-0.1650Yes
141FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]36828-3.703-0.1547Yes
142CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]36829-3.704-0.1444Yes
143BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36873-3.821-0.1349Yes
144ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36920-3.941-0.1251Yes
145CEP55centrosomal protein 55 [Source:HGNC Symbol;Acc:HGNC:1161]36930-3.967-0.1143Yes
146RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36939-3.976-0.1034Yes
147H2AZ2H2A.Z variant histone 2 [Source:HGNC Symbol;Acc:HGNC:20664]36969-4.093-0.0928Yes
148CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]36976-4.107-0.0815Yes
149NRMnurim [Source:HGNC Symbol;Acc:HGNC:8003]36979-4.110-0.0701Yes
150CCDC18coiled-coil domain containing 18 [Source:HGNC Symbol;Acc:HGNC:30370]36982-4.113-0.0587Yes
151NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36994-4.180-0.0474Yes
152DEPDC1BDEP domain containing 1B [Source:HGNC Symbol;Acc:HGNC:24902]36995-4.190-0.0357Yes
153TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]37006-4.236-0.0242Yes
154TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37070-4.666-0.0129Yes
155ESCO2establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:27230]37082-4.7990.0002Yes
Table: GSEA details [plain text format]



Fig 2: FAN_EMBRYONIC_CTX_MICROGLIA_1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: FAN_EMBRYONIC_CTX_MICROGLIA_1: Random ES distribution   
Gene set null distribution of ES for FAN_EMBRYONIC_CTX_MICROGLIA_1