Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetTRAVAGLINI_LUNG_PROLIFERATING_NK_T_CELL
Enrichment Score (ES)-0.822113
Normalized Enrichment Score (NES)-1.7158686
Nominal p-value0.0
FDR q-value0.0
FWER p-Value0.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: TRAVAGLINI_LUNG_PROLIFERATING_NK_T_CELL   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]304.7380.0194No
2RANBP1RAN binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9847]20170.936-0.0303No
3CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]24280.770-0.0381No
4PSMD8proteasome 26S subunit, non-ATPase 8 [Source:HGNC Symbol;Acc:HGNC:9566]27200.670-0.0431No
5PPIApeptidylprolyl isomerase A [Source:HGNC Symbol;Acc:HGNC:9253]31950.555-0.0536No
6NUCB2nucleobindin 2 [Source:HGNC Symbol;Acc:HGNC:8044]33080.525-0.0544No
7IGFBP7insulin like growth factor binding protein 7 [Source:HGNC Symbol;Acc:HGNC:5476]39060.398-0.0688No
8SNRPBsmall nuclear ribonucleoprotein polypeptides B and B1 [Source:HGNC Symbol;Acc:HGNC:11153]41630.348-0.0743No
9HMGN2high mobility group nucleosomal binding domain 2 [Source:HGNC Symbol;Acc:HGNC:4986]42000.339-0.0738No
10RCC1regulator of chromosome condensation 1 [Source:HGNC Symbol;Acc:HGNC:1913]42260.334-0.0731No
11RANRAN, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:9846]44980.278-0.0792No
12PSMC3proteasome 26S subunit, ATPase 3 [Source:HGNC Symbol;Acc:HGNC:9549]45640.264-0.0798No
13CD160CD160 molecule [Source:HGNC Symbol;Acc:HGNC:17013]73840.000-0.1561No
14C21orf58chromosome 21 open reading frame 58 [Source:HGNC Symbol;Acc:HGNC:1300]104490.000-0.2390No
15GZMBgranzyme B [Source:HGNC Symbol;Acc:HGNC:4709]118870.000-0.2779No
16APOBEC3Bapolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]123140.000-0.2894No
17C12orf75chromosome 12 open reading frame 75 [Source:HGNC Symbol;Acc:HGNC:35164]125840.000-0.2967No
18SH2D1BSH2 domain containing 1B [Source:HGNC Symbol;Acc:HGNC:30416]158370.000-0.3846No
19S1PR5sphingosine-1-phosphate receptor 5 [Source:HGNC Symbol;Acc:HGNC:14299]179200.000-0.4410No
20ICAM2intercellular adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:5345]181860.000-0.4481No
21GNLYgranulysin [Source:HGNC Symbol;Acc:HGNC:4414]223460.000-0.5607No
22KLRF1killer cell lectin like receptor F1 [Source:HGNC Symbol;Acc:HGNC:13342]237930.000-0.5998No
23CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]239820.000-0.6049No
24HMGN3high mobility group nucleosomal binding domain 3 [Source:HGNC Symbol;Acc:HGNC:12312]243950.000-0.6160No
25PRSS23serine protease 23 [Source:HGNC Symbol;Acc:HGNC:14370]251300.000-0.6359No
26FGFBP2fibroblast growth factor binding protein 2 [Source:HGNC Symbol;Acc:HGNC:29451]256220.000-0.6492No
27CCDC167coiled-coil domain containing 167 [Source:HGNC Symbol;Acc:HGNC:21239]257610.000-0.6529No
28ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]260190.000-0.6598No
29GGHgamma-glutamyl hydrolase [Source:HGNC Symbol;Acc:HGNC:4248]27673-0.057-0.7043No
30DHFRdihydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:2861]29048-0.257-0.7404No
31DCTN3dynactin subunit 3 [Source:HGNC Symbol;Acc:HGNC:2713]29252-0.290-0.7446No
32PTMAprothymosin alpha [Source:HGNC Symbol;Acc:HGNC:9623]31016-0.561-0.7899No
33SNRNP25small nuclear ribonucleoprotein U11/U12 subunit 25 [Source:HGNC Symbol;Acc:HGNC:14161]31031-0.564-0.7879No
34SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]31383-0.630-0.7947No
35POLQDNA polymerase theta [Source:HGNC Symbol;Acc:HGNC:9186]31932-0.738-0.8064No
36LSM5LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:HGNC Symbol;Acc:HGNC:17162]32042-0.765-0.8061No
37MND1meiotic nuclear divisions 1 [Source:HGNC Symbol;Acc:HGNC:24839]32109-0.782-0.8045No
38AKR1C3aldo-keto reductase family 1 member C3 [Source:HGNC Symbol;Acc:HGNC:386]32315-0.842-0.8065No
39TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32418-0.869-0.8055No
40PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32753-0.958-0.8105No
41SKA3spindle and kinetochore associated complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:20262]32830-0.984-0.8083No
42HPRT1hypoxanthine phosphoribosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:5157]33340-1.140-0.8172Yes
43FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]33397-1.158-0.8138Yes
44APMAPadipocyte plasma membrane associated protein [Source:HGNC Symbol;Acc:HGNC:13238]33458-1.174-0.8104Yes
45TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]33741-1.280-0.8126Yes
46TROAPtrophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]33756-1.284-0.8075Yes
47SKA2spindle and kinetochore associated complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:28006]33850-1.319-0.8044Yes
48MCM10minichromosome maintenance 10 replication initiation factor [Source:HGNC Symbol;Acc:HGNC:18043]33916-1.342-0.8004Yes
49DIAPH3diaphanous related formin 3 [Source:HGNC Symbol;Acc:HGNC:15480]33930-1.347-0.7950Yes
50DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]34095-1.401-0.7935Yes
51HMGB1high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]34140-1.424-0.7886Yes
52CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]34146-1.427-0.7826Yes
53CENPUcentromere protein U [Source:HGNC Symbol;Acc:HGNC:21348]34297-1.486-0.7803Yes
54HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34312-1.491-0.7744Yes
55CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]34381-1.518-0.7697Yes
56ORC6origin recognition complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:17151]34524-1.572-0.7669Yes
57ZNF367zinc finger protein 367 [Source:HGNC Symbol;Acc:HGNC:18320]34624-1.612-0.7627Yes
58CDC45cell division cycle 45 [Source:HGNC Symbol;Acc:HGNC:1739]34638-1.617-0.7561Yes
59MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]34684-1.643-0.7503Yes
60PKMYT1protein kinase, membrane associated tyrosine/threonine 1 [Source:HGNC Symbol;Acc:HGNC:29650]34732-1.666-0.7445Yes
61FANCD2FA complementation group D2 [Source:HGNC Symbol;Acc:HGNC:3585]34824-1.707-0.7396Yes
62H2AZ1H2A.Z variant histone 1 [Source:HGNC Symbol;Acc:HGNC:4741]34958-1.777-0.7357Yes
63PXMP2peroxisomal membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:9716]34959-1.778-0.7281Yes
64MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35062-1.840-0.7230Yes
65FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]35131-1.888-0.7168Yes
66MAD2L1mitotic arrest deficient 2 like 1 [Source:HGNC Symbol;Acc:HGNC:6763]35138-1.892-0.7088Yes
67NUDT1nudix hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:8048]35141-1.895-0.7008Yes
68CDT1chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]35143-1.895-0.6928Yes
69GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]35192-1.927-0.6858Yes
70OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]35217-1.946-0.6782Yes
71RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]35318-2.003-0.6723Yes
72RPA3replication protein A3 [Source:HGNC Symbol;Acc:HGNC:10291]35348-2.023-0.6645Yes
73CENPNcentromere protein N [Source:HGNC Symbol;Acc:HGNC:30873]35359-2.031-0.6561Yes
74TUBG1tubulin gamma 1 [Source:HGNC Symbol;Acc:HGNC:12417]35373-2.046-0.6477Yes
75CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]35407-2.067-0.6398Yes
76DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]35510-2.132-0.6334Yes
77CENPMcentromere protein M [Source:HGNC Symbol;Acc:HGNC:18352]35632-2.222-0.6272Yes
78TUBA1Btubulin alpha 1b [Source:HGNC Symbol;Acc:HGNC:18809]35701-2.280-0.6193Yes
79SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35759-2.331-0.6109Yes
80GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]35779-2.351-0.6014Yes
81HELLShelicase, lymphoid specific [Source:HGNC Symbol;Acc:HGNC:4861]35800-2.370-0.5918Yes
82MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35807-2.374-0.5819Yes
83CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]35813-2.385-0.5718Yes
84RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]35830-2.402-0.5620Yes
85GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]35880-2.445-0.5529Yes
86IDH2isocitrate dehydrogenase (NADP(+)) 2 [Source:HGNC Symbol;Acc:HGNC:5383]35904-2.462-0.5430Yes
87TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35941-2.490-0.5334Yes
88CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]35993-2.546-0.5239Yes
89EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]36065-2.624-0.5146Yes
90TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]36069-2.626-0.5035Yes
91CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]36083-2.637-0.4926Yes
92MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]36125-2.680-0.4822Yes
93MCM6minichromosome maintenance complex component 6 [Source:HGNC Symbol;Acc:HGNC:6949]36129-2.683-0.4709Yes
94HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36191-2.745-0.4608Yes
95SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]36199-2.753-0.4492Yes
96E2F1E2F transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3113]36208-2.759-0.4377Yes
97ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]36251-2.795-0.4269Yes
98STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36260-2.803-0.4151Yes
99ATAD2ATPase family AAA domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30123]36303-2.848-0.4041Yes
100EBPEBP cholestenol delta-isomerase [Source:HGNC Symbol;Acc:HGNC:3133]36330-2.895-0.3925Yes
101UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36357-2.930-0.3807Yes
102CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36421-3.011-0.3695Yes
103DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36426-3.017-0.3568Yes
104ATAD5ATPase family AAA domain containing 5 [Source:HGNC Symbol;Acc:HGNC:25752]36431-3.025-0.3439Yes
105MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36439-3.036-0.3312Yes
106TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36461-3.062-0.3187Yes
107UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]36476-3.083-0.3059Yes
108MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36508-3.121-0.2934Yes
109NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36546-3.187-0.2808Yes
110TMEM106Ctransmembrane protein 106C [Source:HGNC Symbol;Acc:HGNC:28775]36562-3.211-0.2675Yes
111MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36575-3.228-0.2541Yes
112DNMT1DNA methyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:2976]36635-3.330-0.2415Yes
113CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36660-3.369-0.2277Yes
114CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36664-3.374-0.2134Yes
115NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36691-3.417-0.1995Yes
116AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36698-3.424-0.1851Yes
117KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]36700-3.426-0.1705Yes
118CENPKcentromere protein K [Source:HGNC Symbol;Acc:HGNC:29479]36705-3.438-0.1559Yes
119BRCA2BRCA2 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1101]36707-3.439-0.1413Yes
120KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36710-3.442-0.1266Yes
121KIF14kinesin family member 14 [Source:HGNC Symbol;Acc:HGNC:19181]36808-3.649-0.1137Yes
122CLSPNclaspin [Source:HGNC Symbol;Acc:HGNC:19715]36829-3.704-0.0984Yes
123BIRC5baculoviral IAP repeat containing 5 [Source:HGNC Symbol;Acc:HGNC:593]36873-3.821-0.0833Yes
124ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]36920-3.941-0.0677Yes
125RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36939-3.976-0.0512Yes
126H2AZ2H2A.Z variant histone 2 [Source:HGNC Symbol;Acc:HGNC:20664]36969-4.093-0.0345Yes
127NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]36994-4.180-0.0173Yes
128TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37070-4.6660.0005Yes
Table: GSEA details [plain text format]



Fig 2: TRAVAGLINI_LUNG_PROLIFERATING_NK_T_CELL   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: TRAVAGLINI_LUNG_PROLIFERATING_NK_T_CELL: Random ES distribution   
Gene set null distribution of ES for TRAVAGLINI_LUNG_PROLIFERATING_NK_T_CELL