Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | HALLMARK_ANGIOGENESIS |
| Enrichment Score (ES) | 0.5529043 |
| Normalized Enrichment Score (NES) | 1.188093 |
| Nominal p-value | 0.17117117 |
| FDR q-value | 0.13255514 |
| FWER p-Value | 0.341 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | ITGAV | integrin subunit alpha V [Source:HGNC Symbol;Acc:HGNC:6150] | 161 | 3.659 | 0.1723 | Yes |
| 2 | SPP1 | secreted phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:11255] | 171 | 3.617 | 0.3468 | Yes |
| 3 | CCND2 | cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583] | 760 | 1.874 | 0.4214 | Yes |
| 4 | TIMP1 | TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820] | 1387 | 1.254 | 0.4651 | Yes |
| 5 | PDGFA | platelet derived growth factor subunit A [Source:HGNC Symbol;Acc:HGNC:8799] | 1765 | 1.052 | 0.5057 | Yes |
| 6 | PTK2 | protein tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:9611] | 2135 | 0.882 | 0.5384 | Yes |
| 7 | SLCO2A1 | solute carrier organic anion transporter family member 2A1 [Source:HGNC Symbol;Acc:HGNC:10955] | 3273 | 0.534 | 0.5334 | Yes |
| 8 | LPL | lipoprotein lipase [Source:HGNC Symbol;Acc:HGNC:6677] | 3442 | 0.497 | 0.5529 | Yes |
| 9 | THBD | thrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784] | 5202 | 0.152 | 0.5128 | No |
| 10 | VEGFA | vascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680] | 5362 | 0.117 | 0.5141 | No |
| 11 | APP | amyloid beta precursor protein [Source:HGNC Symbol;Acc:HGNC:620] | 5750 | 0.044 | 0.5058 | No |
| 12 | APOH | apolipoprotein H [Source:HGNC Symbol;Acc:HGNC:616] | 6478 | 0.000 | 0.4862 | No |
| 13 | FGFR1 | fibroblast growth factor receptor 1 [Source:HGNC Symbol;Acc:HGNC:3688] | 6813 | 0.000 | 0.4772 | No |
| 14 | TNFRSF21 | TNF receptor superfamily member 21 [Source:HGNC Symbol;Acc:HGNC:13469] | 8898 | 0.000 | 0.4209 | No |
| 15 | KCNJ8 | potassium inwardly rectifying channel subfamily J member 8 [Source:HGNC Symbol;Acc:HGNC:6269] | 9549 | 0.000 | 0.4034 | No |
| 16 | POSTN | periostin [Source:HGNC Symbol;Acc:HGNC:16953] | 9961 | 0.000 | 0.3923 | No |
| 17 | PRG2 | proteoglycan 2, pro eosinophil major basic protein [Source:HGNC Symbol;Acc:HGNC:9362] | 11230 | 0.000 | 0.3581 | No |
| 18 | MSX1 | msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391] | 12342 | 0.000 | 0.3281 | No |
| 19 | VTN | vitronectin [Source:HGNC Symbol;Acc:HGNC:12724] | 13114 | 0.000 | 0.3073 | No |
| 20 | OLR1 | oxidized low density lipoprotein receptor 1 [Source:HGNC Symbol;Acc:HGNC:8133] | 16665 | 0.000 | 0.2115 | No |
| 21 | SERPINA5 | serpin family A member 5 [Source:HGNC Symbol;Acc:HGNC:8723] | 17732 | 0.000 | 0.1827 | No |
| 22 | LUM | lumican [Source:HGNC Symbol;Acc:HGNC:6724] | 18694 | 0.000 | 0.1568 | No |
| 23 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19366 | 0.000 | 0.1387 | No |
| 24 | COL3A1 | collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201] | 19553 | 0.000 | 0.1337 | No |
| 25 | PF4 | platelet factor 4 [Source:HGNC Symbol;Acc:HGNC:8861] | 19916 | 0.000 | 0.1239 | No |
| 26 | COL5A2 | collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210] | 20293 | 0.000 | 0.1137 | No |
| 27 | PGLYRP1 | peptidoglycan recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:8904] | 20772 | 0.000 | 0.1008 | No |
| 28 | FSTL1 | follistatin like 1 [Source:HGNC Symbol;Acc:HGNC:3972] | 21229 | 0.000 | 0.0885 | No |
| 29 | STC1 | stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373] | 27252 | 0.000 | -0.0740 | No |
| 30 | VCAN | versican [Source:HGNC Symbol;Acc:HGNC:2464] | 27953 | -0.096 | -0.0882 | No |
| 31 | LRPAP1 | LDL receptor related protein associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6701] | 29446 | -0.319 | -0.1131 | No |
| 32 | S100A4 | S100 calcium binding protein A4 [Source:HGNC Symbol;Acc:HGNC:10494] | 31694 | -0.688 | -0.1405 | No |
| 33 | JAG1 | jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188] | 32464 | -0.879 | -0.1188 | No |
| 34 | JAG2 | jagged canonical Notch ligand 2 [Source:HGNC Symbol;Acc:HGNC:6189] | 33470 | -1.180 | -0.0890 | No |
| 35 | VAV2 | vav guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:12658] | 34704 | -1.651 | -0.0425 | No |
| 36 | NRP1 | neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004] | 35623 | -2.214 | 0.0396 | No |
