Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetCHR2Q11
Enrichment Score (ES)0.43023053
Normalized Enrichment Score (NES)1.1139374
Nominal p-value0.15384616
FDR q-value0.7712975
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q11   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DUSP2dual specificity phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:3068]514.6910.0738Yes
2SEMA4Csemaphorin 4C [Source:HGNC Symbol;Acc:HGNC:10731]1134.3030.1411Yes
3ARID5AAT-rich interaction domain 5A [Source:HGNC Symbol;Acc:HGNC:17361]3513.3510.1884Yes
4MITD1microtubule interacting and trafficking domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25207]7602.5090.2175Yes
5RNF149ring finger protein 149 [Source:HGNC Symbol;Acc:HGNC:23137]7652.4920.2574Yes
6ITPRIPL1ITPRIP like 1 [Source:HGNC Symbol;Acc:HGNC:29371]11561.9500.2781Yes
7SNX18P14sorting nexin 18 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:39622]12841.8760.3047Yes
8SNORD89small nucleolar RNA, C/D box 89 [Source:HGNC Symbol;Acc:HGNC:32750]12991.8760.3344Yes
9TXNDC9thioredoxin domain containing 9 [Source:HGNC Symbol;Acc:HGNC:24110]20701.3080.3345Yes
10TMEM127transmembrane protein 127 [Source:HGNC Symbol;Acc:HGNC:26038]23211.2120.3471Yes
11CREG2cellular repressor of E1A stimulated genes 2 [Source:HGNC Symbol;Acc:HGNC:14272]24271.1580.3629Yes
12YWHAQP5YWHAQ pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:37684]25031.1280.3789Yes
13CIAO1cytosolic iron-sulfur assembly component 1 [Source:HGNC Symbol;Acc:HGNC:14280]29150.9520.3830Yes
14CNOT11CCR4-NOT transcription complex subunit 11 [Source:HGNC Symbol;Acc:HGNC:25217]30940.8830.3924Yes
15NEURL3neuralized E3 ubiquitin protein ligase 3 [Source:HGNC Symbol;Acc:HGNC:25162]31800.8510.4037Yes
16FAHD2Bfumarylacetoacetate hydrolase domain containing 2B [Source:HGNC Symbol;Acc:HGNC:25318]32980.8000.4134Yes
17BBIP1P1BBSome interacting protein 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52781]35710.7120.4174Yes
18EIF5Beukaryotic translation initiation factor 5B [Source:HGNC Symbol;Acc:HGNC:30793]38840.6110.4188Yes
19MGAT4Aalpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A [Source:HGNC Symbol;Acc:HGNC:7047]38930.6080.4283Yes
20CHST10carbohydrate sulfotransferase 10 [Source:HGNC Symbol;Acc:HGNC:19650]41410.5370.4302Yes
21ACTR1Bactin related protein 1B [Source:HGNC Symbol;Acc:HGNC:168]45200.4250.4268No
22TSGA10testis specific 10 [Source:HGNC Symbol;Acc:HGNC:14927]50580.2700.4166No
23MRPL30mitochondrial ribosomal protein L30 [Source:HGNC Symbol;Acc:HGNC:14036]53630.2390.4122No
24CRACDLCRACD like [Source:HGNC Symbol;Acc:HGNC:33454]56090.2210.4091No
25KANSL3KAT8 regulatory NSL complex subunit 3 [Source:HGNC Symbol;Acc:HGNC:25473]56580.2020.4111No
26TMEM131transmembrane protein 131 [Source:HGNC Symbol;Acc:HGNC:30366]59500.1160.4051No
27COA5cytochrome c oxidase assembly factor 5 [Source:HGNC Symbol;Acc:HGNC:33848]61080.0670.4019No
28UNC50unc-50 inner nuclear membrane RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16046]62580.0250.3982No
29LONRF2LON peptidase N-terminal domain and ring finger 2 [Source:HGNC Symbol;Acc:HGNC:24788]72230.0000.3722No
30AC013270.1novel transcript73060.0000.3699No
31ANKRD36ankyrin repeat domain 36 [Source:HGNC Symbol;Acc:HGNC:24079]77520.0000.3579No
32ASTLastacin like metalloendopeptidase [Source:HGNC Symbol;Acc:HGNC:31704]79070.0000.3537No
33PROM2prominin 2 [Source:HGNC Symbol;Acc:HGNC:20685]83670.0000.3413No
34OR7E102Polfactory receptor family 7 subfamily E member 102 pseudogene [Source:HGNC Symbol;Acc:HGNC:15043]84440.0000.3393No
35TBC1D8-AS1TBC1D8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52782]88700.0000.3278No
36LINC01104long intergenic non-protein coding RNA 1104 [Source:HGNC Symbol;Acc:HGNC:49226]90110.0000.3240No
37IGKV3OR2-5immunoglobulin kappa variable 3/OR2-5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5832]92170.0000.3184No
38TRIM43CPtripartite motif containing 43C, pseudogene [Source:HGNC Symbol;Acc:HGNC:43981]95870.0000.3084No
39NPAS2neuronal PAS domain protein 2 [Source:HGNC Symbol;Acc:HGNC:7895]98300.0000.3019No
40IGKV1OR2-6immunoglobulin kappa variable 1/OR2-6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5770]99620.0000.2984No
41IGKV1OR2-9immunoglobulin kappa variable 1/OR2-9 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5771]99660.0000.2983No
42IGKV1OR2-3immunoglobulin kappa variable 1/OR2-3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5769]99730.0000.2981No
43FAM178Bfamily with sequence similarity 178 member B [Source:HGNC Symbol;Acc:HGNC:28036]105920.0000.2814No
44FABP7P2fatty acid binding protein 7 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:41952]109780.0000.2710No
45ANKRD20A8Pankyrin repeat domain 20 family member A8, pseudogene [Source:HGNC Symbol;Acc:HGNC:23666]110870.0000.2680No
46RNU4-84PRNA, U4 small nuclear 84, pseudogene [Source:HGNC Symbol;Acc:HGNC:47020]112690.0000.2632No
47RNU6-1320PRNA, U6 small nuclear 1320, pseudogene [Source:HGNC Symbol;Acc:HGNC:48283]116150.0000.2538No
48SLC2AXP1solute carrier family 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:31077]117100.0000.2513No
49AFF3AF4/FMR2 family member 3 [Source:HGNC Symbol;Acc:HGNC:6473]117350.0000.2506No
50LINC00342long intergenic non-protein coding RNA 342 [Source:HGNC Symbol;Acc:HGNC:42470]130370.0000.2154No
51MTCO1P48MT-CO1 pseudogene 48 [Source:HGNC Symbol;Acc:HGNC:52113]131520.0000.2123No
52MTCO3P45MT-CO3 pseudogene 45 [Source:HGNC Symbol;Acc:HGNC:52148]141610.0000.1851No
53RFX8RFX family member 8, lacking RFX DNA binding domain [Source:HGNC Symbol;Acc:HGNC:37253]144650.0000.1769No
54RNU7-46PRNA, U7 small nuclear 46 pseudogene [Source:HGNC Symbol;Acc:HGNC:34142]149580.0000.1636No
55TRIM43tripartite motif containing 43 [Source:HGNC Symbol;Acc:HGNC:19015]154410.0000.1505No
56RN7SL575PRNA, 7SL, cytoplasmic 575, pseudogene [Source:HGNC Symbol;Acc:HGNC:46591]157480.0000.1422No
57IL1R1interleukin 1 receptor type 1 [Source:HGNC Symbol;Acc:HGNC:5993]158850.0000.1386No
58IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158860.0000.1386No
59ZAP70zeta chain of T cell receptor associated protein kinase 70 [Source:HGNC Symbol;Acc:HGNC:12858]160250.0000.1348No
60RN7SL313PRNA, 7SL, cytoplasmic 313, pseudogene [Source:HGNC Symbol;Acc:HGNC:46329]163320.0000.1265No
61ADRA2Badrenoceptor alpha 2B [Source:HGNC Symbol;Acc:HGNC:282]165390.0000.1210No
62AC097374.1pseudogene similar to part of asparagine synthetase (ASNS)172330.0000.1022No
63AL845331.1putative aquaporin-7-like protein 3 [Source:NCBI gene (formerly Entrezgene);Acc:100509620]177480.0000.0883No
64ANKRD36Cankyrin repeat domain 36C [Source:HGNC Symbol;Acc:HGNC:32946]178990.0000.0843No
65ANKRD36Bankyrin repeat domain 36B [Source:HGNC Symbol;Acc:HGNC:29333]179060.0000.0841No
66STARD7-AS1STARD7 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40827]183110.0000.0732No
67IGKV1OR2-11immunoglobulin kappa variable 1/OR2-11 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5768]184730.0000.0688No
68IGKV2OR2-7Dimmunoglobulin kappa variable 2/OR2-7D (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37489]186000.0000.0654No
69IGKV2OR2-10immunoglobulin kappa variable 2/OR2-10 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5806]186470.0000.0642No
70MALmal, T cell differentiation protein [Source:HGNC Symbol;Acc:HGNC:6817]189780.0000.0552No
71RNA5SP101RNA, 5S ribosomal pseudogene 101 [Source:HGNC Symbol;Acc:HGNC:42899]191070.0000.0518No
72NMSneuromedin S [Source:HGNC Symbol;Acc:HGNC:32203]194360.0000.0429No
73NANOGNBP1NANOGNB pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42158]195020.0000.0411No
74LINC01870long intergenic non-protein coding RNA 1870 [Source:HGNC Symbol;Acc:HGNC:52689]196150.0000.0381No
75LINC01868long intergenic non-protein coding RNA 1868 [Source:HGNC Symbol;Acc:HGNC:52688]196220.0000.0379No
76LINC01849long intergenic non-protein coding RNA 1849 [Source:HGNC Symbol;Acc:HGNC:52665]197230.0000.0352No
77TEKT4tektin 4 [Source:HGNC Symbol;Acc:HGNC:31012]199170.0000.0300No
78CNGA3cyclic nucleotide gated channel subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:2150]210050.0000.0006No
79KCNIP3potassium voltage-gated channel interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:15523]210330.000-0.0001No
80UBTFL3UBTF like 3 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35402]211310.000-0.0028No
81UBTFL6UBTF like 6 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35406]211340.000-0.0028No
82UBTFL5UBTF like 5 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:35405]211350.000-0.0028No
83RN7SL210PRNA, 7SL, cytoplasmic 210, pseudogene [Source:HGNC Symbol;Acc:HGNC:46226]211930.000-0.0044No
84HMGN1P36high mobility group nucleosome binding domain 1 pseudogene 36 [Source:HGNC Symbol;Acc:HGNC:39380]222000.000-0.0316No
85TRIM43Btripartite motif containing 43B [Source:HGNC Symbol;Acc:HGNC:37146]222210.000-0.0321No
86FER1L5fer-1 like family member 5 [Source:HGNC Symbol;Acc:HGNC:19044]225100.000-0.0399No
87LYG1lysozyme g1 [Source:HGNC Symbol;Acc:HGNC:27014]225840.000-0.0419No
88LYG2lysozyme g2 [Source:HGNC Symbol;Acc:HGNC:29615]225850.000-0.0419No
89GPAT2glycerol-3-phosphate acyltransferase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:27168]227420.000-0.0461No
90TRIM51JPtripartite motif-containing 51J, pseudogene [Source:HGNC Symbol;Acc:HGNC:43978]234310.000-0.0647No
91CNN2P11calponin 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:39536]243190.000-0.0887No
92IGKV2OR2-2immunoglobulin kappa variable 2/OR2-2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5808]243850.000-0.0905No
93IGKV2OR2-1immunoglobulin kappa variable 2/OR2-1 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5805]243870.000-0.0905No
94IGKV2OR2-8immunoglobulin kappa variable 2/OR2-8 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5811]243990.000-0.0908No
95IGKV2OR2-7immunoglobulin kappa variable 2/OR2-7 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:5810]244000.000-0.0908No
96GPAT2P2glycerol-3-phosphate acyltransferase 2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:52331]247510.000-0.1003No
97GPAT2P1glycerol-3-phosphate acyltransferase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:52330]247550.000-0.1003No
98RNU7-96PRNA, U7 small nuclear 96 pseudogene [Source:HGNC Symbol;Acc:HGNC:45630]256410.000-0.1243No
99MIR5696microRNA 5696 [Source:HGNC Symbol;Acc:HGNC:43516]257780.000-0.1280No
100CNN2P8calponin 2 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:39533]258550.000-0.1300No
101MIR3127microRNA 3127 [Source:HGNC Symbol;Acc:HGNC:38269]260470.000-0.1352No
102RNU4-8PRNA, U4 small nuclear 8, pseudogene [Source:HGNC Symbol;Acc:HGNC:10195]262690.000-0.1412No
103VWA3Bvon Willebrand factor A domain containing 3B [Source:HGNC Symbol;Acc:HGNC:28385]263690.000-0.1439No
104C2orf92chromosome 2 open reading frame 92 [Source:HGNC Symbol;Acc:HGNC:49272]264260.000-0.1454No
105C2orf15chromosome 2 open reading frame 15 [Source:HGNC Symbol;Acc:HGNC:28436]265610.000-0.1490No
106TRIM64FPtripartite motif containing 64F, pseudogene [Source:HGNC Symbol;Acc:HGNC:43976]266820.000-0.1522No
107ZNF514zinc finger protein 514 [Source:HGNC Symbol;Acc:HGNC:25894]269070.000-0.1583No
108CYP4F32Pcytochrome P450 family 4 subfamily F member 32, pseudogene [Source:HGNC Symbol;Acc:HGNC:39951]279170.000-0.1856No
109ATP5F1BP1ATP synthase F1 subunit beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:831]28643-0.032-0.2047No
110CNNM4cyclin and CBS domain divalent metal cation transport mediator 4 [Source:HGNC Symbol;Acc:HGNC:105]29150-0.162-0.2158No
111COX5Bcytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]29529-0.247-0.2221No
112MAP4K4mitogen-activated protein kinase kinase kinase kinase 4 [Source:HGNC Symbol;Acc:HGNC:6866]29571-0.255-0.2191No
113MRPS5mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:14498]29909-0.334-0.2229No
114LMAN2Llectin, mannose binding 2 like [Source:HGNC Symbol;Acc:HGNC:19263]29918-0.335-0.2177No
115RPS24P6ribosomal protein S24 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:36240]29968-0.346-0.2135No
116ANKRD39ankyrin repeat domain 39 [Source:HGNC Symbol;Acc:HGNC:28640]29988-0.351-0.2084No
117RPL31ribosomal protein L31 [Source:HGNC Symbol;Acc:HGNC:10334]30065-0.369-0.2045No
118HMGN2P22high mobility group nucleosomal binding domain 2 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:39387]30867-0.584-0.2168No
119SNRNP200small nuclear ribonucleoprotein U5 subunit 200 [Source:HGNC Symbol;Acc:HGNC:30859]30875-0.586-0.2076No
120REV1REV1 DNA directed polymerase [Source:HGNC Symbol;Acc:HGNC:14060]30888-0.588-0.1985No
121STARD7StAR related lipid transfer domain containing 7 [Source:HGNC Symbol;Acc:HGNC:18063]32124-0.950-0.2167No
122ZNF2zinc finger protein 2 [Source:HGNC Symbol;Acc:HGNC:12991]33635-1.452-0.2343No
123INPP4Ainositol polyphosphate-4-phosphatase type I A [Source:HGNC Symbol;Acc:HGNC:6074]33881-1.549-0.2161No
124PDCL3phosducin like 3 [Source:HGNC Symbol;Acc:HGNC:28860]34104-1.666-0.1954No
125FAHD2Afumarylacetoacetate hydrolase domain containing 2A [Source:HGNC Symbol;Acc:HGNC:24252]34259-1.746-0.1716No
126ANKRD23ankyrin repeat domain 23 [Source:HGNC Symbol;Acc:HGNC:24470]34746-2.001-0.1527No
127LIPT1lipoyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:29569]35265-2.316-0.1296No
128NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]35378-2.378-0.0945No
129CNNM3cyclin and CBS domain divalent metal cation transport mediator 3 [Source:HGNC Symbol;Acc:HGNC:104]35862-2.793-0.0628No
130FAHD2CPfumarylacetoacetate hydrolase domain containing 2C, pseudogene [Source:HGNC Symbol;Acc:HGNC:44135]35886-2.835-0.0180No
131TBC1D8TBC1 domain family member 8 [Source:HGNC Symbol;Acc:HGNC:17791]36186-3.1540.0245No
Table: GSEA details [plain text format]



Fig 2: CHR2Q11   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q11: Random ES distribution   
Gene set null distribution of ES for CHR2Q11