Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetCHR2Q14
Enrichment Score (ES)0.47366795
Normalized Enrichment Score (NES)1.2297988
Nominal p-value0.034188036
FDR q-value0.56207067
FWER p-Value0.973
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q14   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]34.9960.0682Yes
2IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]124.9750.1361Yes
3IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]434.7840.2007Yes
4ISCA1P6iron-sulfur cluster assembly 1 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:38027]8012.4170.2133Yes
5POLR1BRNA polymerase I subunit B [Source:HGNC Symbol;Acc:HGNC:20454]8262.3780.2451Yes
6TMEM185Btransmembrane protein 185B [Source:HGNC Symbol;Acc:HGNC:18896]11092.0040.2649Yes
7LIMS2LIM zinc finger domain containing 2 [Source:HGNC Symbol;Acc:HGNC:16084]11171.9920.2920Yes
8RPL12P15ribosomal protein L12 pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:36619]12561.8760.3139Yes
9ZC3H8zinc finger CCCH-type containing 8 [Source:HGNC Symbol;Acc:HGNC:30941]13501.8720.3370Yes
10SLC20A1solute carrier family 20 member 1 [Source:HGNC Symbol;Acc:HGNC:10946]13771.8390.3614Yes
11YWHAZP2tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:31078]14751.7250.3824Yes
12ACTR3actin related protein 3 [Source:HGNC Symbol;Acc:HGNC:170]15571.6630.4029Yes
13NIFKnucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]15891.6360.4245Yes
14C2orf76chromosome 2 open reading frame 76 [Source:HGNC Symbol;Acc:HGNC:27017]20641.3110.4296Yes
15AMMECR1LAMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]21371.2720.4450Yes
16TFCP2L1transcription factor CP2 like 1 [Source:HGNC Symbol;Acc:HGNC:17925]22961.2250.4575Yes
17DDX18DEAD-box helicase 18 [Source:HGNC Symbol;Acc:HGNC:2741]23131.2160.4737Yes
18SLC35F5solute carrier family 35 member F5 [Source:HGNC Symbol;Acc:HGNC:23617]33880.7800.4553No
19MAP3K2mitogen-activated protein kinase kinase kinase 2 [Source:HGNC Symbol;Acc:HGNC:6854]35120.7310.4619No
20POLR2DRNA polymerase II subunit D [Source:HGNC Symbol;Acc:HGNC:9191]38150.6390.4625No
21DBIdiazepam binding inhibitor, acyl-CoA binding protein [Source:HGNC Symbol;Acc:HGNC:2690]40270.5710.4646No
22XIAPP3X-linked inhibitor of apoptosis pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:52377]40960.5500.4703No
23TSNtranslin [Source:HGNC Symbol;Acc:HGNC:12379]47800.3500.4566No
24SEPHS1P7selenophosphate synthetase 1 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:42167]52890.2390.4461No
25NDUFB4P6NADH:ubiquinone oxidoreductase subunit B4 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:45254]53860.2390.4468No
26GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]54660.2390.4479No
27WDR33WD repeat domain 33 [Source:HGNC Symbol;Acc:HGNC:25651]57600.1720.4423No
28NPM1P32nucleophosmin 1 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:45211]63200.0090.4273No
29SCTRsecretin receptor [Source:HGNC Symbol;Acc:HGNC:10608]67200.0000.4165No
30HTR5BP5-hydroxytryptamine receptor 5B, pseudogene [Source:HGNC Symbol;Acc:HGNC:16291]72130.0000.4032No
31CNTNAP5contactin associated protein family member 5 [Source:HGNC Symbol;Acc:HGNC:18748]74700.0000.3963No
32CYP27C1cytochrome P450 family 27 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:33480]79200.0000.3841No
33FOXD4L1forkhead box D4 like 1 [Source:HGNC Symbol;Acc:HGNC:18521]84500.0000.3698No
34RNU6-395PRNA, U6 small nuclear 395, pseudogene [Source:HGNC Symbol;Acc:HGNC:47358]84640.0000.3695No
35RNU2-41PRNA, U2 small nuclear 41, pseudogene [Source:HGNC Symbol;Acc:HGNC:48534]85360.0000.3675No
36LINC01191long intergenic non-protein coding RNA 1191 [Source:HGNC Symbol;Acc:HGNC:49595]87430.0000.3620No
37LINC01101long intergenic non-protein coding RNA 1101 [Source:HGNC Symbol;Acc:HGNC:25923]90130.0000.3547No
38MARCOmacrophage receptor with collagenous structure [Source:HGNC Symbol;Acc:HGNC:6895]91270.0000.3516No
39DPP10-AS1DPP10 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40941]93240.0000.3463No
40DPP10-AS3DPP10 antisense RNA 3 [Source:HGNC Symbol;Acc:HGNC:40939]93280.0000.3463No
41DPP10-AS2DPP10 antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:40940]93290.0000.3463No
42MTND1P28MT-ND1 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:42077]101260.0000.3247No
43CFAP221cilia and flagella associated protein 221 [Source:HGNC Symbol;Acc:HGNC:33720]103490.0000.3187No
44PGM5P4phosphoglucomutase 5 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:49605]105810.0000.3125No
45IL1F10interleukin 1 family member 10 [Source:HGNC Symbol;Acc:HGNC:15552]110610.0000.2995No
46AC079154.1novel transcript113620.0000.2914No
47IGKV1OR2-108immunoglobulin kappa variable 1/OR2-108 (non-functional) [Source:HGNC Symbol;Acc:HGNC:5767]113720.0000.2911No
48RNU6-744PRNA, U6 small nuclear 744, pseudogene [Source:HGNC Symbol;Acc:HGNC:47707]114240.0000.2898No
49PROCprotein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]117230.0000.2817No
50PSD4pleckstrin and Sec7 domain containing 4 [Source:HGNC Symbol;Acc:HGNC:19096]119160.0000.2765No
51RNU7-190PRNA, U7 small nuclear 190 pseudogene [Source:HGNC Symbol;Acc:HGNC:45724]122930.0000.2663No
52IL36RNinterleukin 36 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:15561]125440.0000.2596No
53RNU6-1180PRNA, U6 small nuclear 1180, pseudogene [Source:HGNC Symbol;Acc:HGNC:48143]126220.0000.2575No
54MTCO1P43MT-CO1 pseudogene 43 [Source:HGNC Symbol;Acc:HGNC:52108]131500.0000.2432No
55RNU6-259PRNA, U6 small nuclear 259, pseudogene [Source:HGNC Symbol;Acc:HGNC:47222]137060.0000.2282No
56IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]138880.0000.2233No
57MTCO3P43MT-CO3 pseudogene 43 [Source:HGNC Symbol;Acc:HGNC:52146]141540.0000.2161No
58MTND5P28MT-ND5 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:42290]147200.0000.2008No
59MTND5P22MT-ND5 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:42284]147280.0000.2006No
60PAX8paired box 8 [Source:HGNC Symbol;Acc:HGNC:8622]149270.0000.1953No
61RNY4P7RNY4 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:34056]151160.0000.1902No
62NT5DC45'-nucleotidase domain containing 4 [Source:HGNC Symbol;Acc:HGNC:27678]152810.0000.1858No
63TEX51testis expressed 51 [Source:HGNC Symbol;Acc:HGNC:52387]153070.0000.1851No
64PAX8-AS1PAX8 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:49271]153830.0000.1831No
65MIR1302-3microRNA 1302-3 [Source:HGNC Symbol;Acc:HGNC:35295]154600.0000.1810No
66IL36Ainterleukin 36 alpha [Source:HGNC Symbol;Acc:HGNC:15562]156140.0000.1769No
67IL36Binterleukin 36 beta [Source:HGNC Symbol;Acc:HGNC:15564]156160.0000.1768No
68IL36Ginterleukin 36 gamma [Source:HGNC Symbol;Acc:HGNC:15741]156480.0000.1760No
69HMGN2P23high mobility group nucleosomal binding domain 2 pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:39388]158620.0000.1702No
70RGPD8RANBP2 like and GRIP domain containing 8 [Source:HGNC Symbol;Acc:HGNC:9849]159490.0000.1679No
71RNU6-675PRNA, U6 small nuclear 675, pseudogene [Source:HGNC Symbol;Acc:HGNC:47638]161900.0000.1614No
72EN1engrailed homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3342]164310.0000.1549No
73SFT2D3SFT2 domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28767]165280.0000.1523No
74MTCYBP39MT-CYB pseudogene 39 [Source:HGNC Symbol;Acc:HGNC:52307]167720.0000.1457No
75NIFK-AS1NIFK antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27385]172300.0000.1334No
76RNU4ATACRNA, U4atac small nuclear (U12-dependent splicing) [Source:HGNC Symbol;Acc:HGNC:34016]174680.0000.1270No
77GPR17G protein-coupled receptor 17 [Source:HGNC Symbol;Acc:HGNC:4471]175220.0000.1255No
78NIFKP9nucleolar protein interacting with the FHA domain of MKI67 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:44957]181630.0000.1082No
79MTND4P26MT-ND4 pseudogene 26 [Source:HGNC Symbol;Acc:HGNC:42213]188210.0000.0904No
80RNA5SP103RNA, 5S ribosomal pseudogene 103 [Source:HGNC Symbol;Acc:HGNC:42901]191050.0000.0828No
81RNA5SP102RNA, 5S ribosomal pseudogene 102 [Source:HGNC Symbol;Acc:HGNC:42900]191060.0000.0828No
82LINC01889long intergenic non-protein coding RNA 1889 [Source:HGNC Symbol;Acc:HGNC:52708]196550.0000.0680No
83LINC01826long intergenic non-protein coding RNA 1826 [Source:HGNC Symbol;Acc:HGNC:52632]196880.0000.0671No
84LINC01823long intergenic non-protein coding RNA 1823 [Source:HGNC Symbol;Acc:HGNC:52628]196960.0000.0669No
85RNU7-182PRNA, U7 small nuclear 182 pseudogene [Source:HGNC Symbol;Acc:HGNC:45716]202140.0000.0529No
86C1QL2complement C1q like 2 [Source:HGNC Symbol;Acc:HGNC:24181]203580.0000.0490No
87RNU4-48PRNA, U4 small nuclear 48, pseudogene [Source:HGNC Symbol;Acc:HGNC:46984]204920.0000.0454No
88MTND3P10MT-ND3 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:42150]215080.0000.0180No
89RN7SL468PRNA, 7SL, cytoplasmic 468, pseudogene [Source:HGNC Symbol;Acc:HGNC:46484]215900.0000.0158No
90FAM138Bfamily with sequence similarity 138 member B [Source:HGNC Symbol;Acc:HGNC:33582]221040.0000.0019No
91PGM5P4-AS1PGM5P4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:51195]225330.000-0.0097No
92MTATP6P26MT-ATP6 pseudogene 26 [Source:HGNC Symbol;Acc:HGNC:52182]226570.000-0.0130No
93DDX11L2DEAD/H-box helicase 11 like 2 (pseudogene) [Source:HGNC Symbol;Acc:HGNC:37103]227990.000-0.0168No
94RABL2ARAB, member of RAS oncogene family like 2A [Source:HGNC Symbol;Acc:HGNC:9799]238140.000-0.0443No
95MIR4783microRNA 4783 [Source:HGNC Symbol;Acc:HGNC:41874]247260.000-0.0689No
96MIR4782microRNA 4782 [Source:HGNC Symbol;Acc:HGNC:41635]247320.000-0.0690No
97TMEM37transmembrane protein 37 [Source:HGNC Symbol;Acc:HGNC:18216]249860.000-0.0759No
98INHBBinhibin subunit beta B [Source:HGNC Symbol;Acc:HGNC:6067]251240.000-0.0796No
99RN7SL111PRNA, 7SL, cytoplasmic 111, pseudogene [Source:HGNC Symbol;Acc:HGNC:46127]252630.000-0.0833No
100LINC01941long intergenic non-protein coding RNA 1941 [Source:HGNC Symbol;Acc:HGNC:52764]252790.000-0.0837No
101RN7SKP102RN7SK pseudogene 102 [Source:HGNC Symbol;Acc:HGNC:45826]253210.000-0.0848No
102LINC01961long intergenic non-protein coding RNA 1961 [Source:HGNC Symbol;Acc:HGNC:52786]253360.000-0.0852No
103LINC01956long intergenic non-protein coding RNA 1956 [Source:HGNC Symbol;Acc:HGNC:52777]253540.000-0.0857No
104MTND2P21MT-ND2 pseudogene 21 [Source:HGNC Symbol;Acc:HGNC:42122]255210.000-0.0902No
105GLI2GLI family zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:4318]267820.000-0.1243No
106CBWD2COBW domain containing 2 [Source:HGNC Symbol;Acc:HGNC:17907]276470.000-0.1476No
107RNU6-1147PRNA, U6 small nuclear 1147, pseudogene [Source:HGNC Symbol;Acc:HGNC:48110]276620.000-0.1480No
108MTND4LP14MT-ND4L pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:42248]282180.000-0.1630No
109DYNLT3P2dynein light chain Tctex-type 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:37081]28668-0.039-0.1747No
110IWS1interacts with SUPT6H, CTD assembly factor 1 [Source:HGNC Symbol;Acc:HGNC:25467]28898-0.096-0.1795No
111TMEM177transmembrane protein 177 [Source:HGNC Symbol;Acc:HGNC:28143]28903-0.097-0.1783No
112CCDC93coiled-coil domain containing 93 [Source:HGNC Symbol;Acc:HGNC:25611]29332-0.205-0.1871No
113RALBRAS like proto-oncogene B [Source:HGNC Symbol;Acc:HGNC:9840]29372-0.215-0.1852No
114STEAP3-AS1STEAP3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41053]29519-0.245-0.1858No
115PTPN4protein tyrosine phosphatase non-receptor type 4 [Source:HGNC Symbol;Acc:HGNC:9656]29547-0.251-0.1831No
116ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit [Source:HGNC Symbol;Acc:HGNC:3435]29708-0.292-0.1834No
117WASH2PWASP family homolog 2, pseudogene [Source:HGNC Symbol;Acc:HGNC:33145]30123-0.388-0.1893No
118RPSAP23ribosomal protein SA pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:36742]30237-0.416-0.1867No
119SAP130Sin3A associated protein 130 [Source:HGNC Symbol;Acc:HGNC:29813]30874-0.585-0.1959No
120CDK8P2cyclin dependent kinase 8 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:52296]31115-0.649-0.1935No
121UGGT1UDP-glucose glycoprotein glucosyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:15663]31616-0.774-0.1965No
122CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]32271-1.013-0.2003No
123TTLtubulin tyrosine ligase [Source:HGNC Symbol;Acc:HGNC:21586]32646-1.131-0.1950No
124CLASP1cytoplasmic linker associated protein 1 [Source:HGNC Symbol;Acc:HGNC:17088]33170-1.319-0.1911No
125INSIG2insulin induced gene 2 [Source:HGNC Symbol;Acc:HGNC:20452]33778-1.508-0.1869No
126HS6ST1heparan sulfate 6-O-sulfotransferase 1 [Source:HGNC Symbol;Acc:HGNC:5201]34178-1.706-0.1743No
127BIN1bridging integrator 1 [Source:HGNC Symbol;Acc:HGNC:1052]34247-1.739-0.1524No
128RPL23AP7ribosomal protein L23a pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:17336]34508-1.863-0.1340No
129EPB41L5erythrocyte membrane protein band 4.1 like 5 [Source:HGNC Symbol;Acc:HGNC:19819]34625-1.942-0.1105No
130MYO7Bmyosin VIIB [Source:HGNC Symbol;Acc:HGNC:7607]34663-1.944-0.0850No
131ZC3H6zinc finger CCCH-type containing 6 [Source:HGNC Symbol;Acc:HGNC:24762]35034-2.199-0.0649No
132DPP10dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]35312-2.321-0.0407No
133CHCHD5coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]35405-2.396-0.0104No
134STEAP3STEAP3 metalloreductase [Source:HGNC Symbol;Acc:HGNC:24592]36842-4.0910.0067No
Table: GSEA details [plain text format]



Fig 2: CHR2Q14   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q14: Random ES distribution   
Gene set null distribution of ES for CHR2Q14