Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCHR4Q25
Enrichment Score (ES)-0.6051872
Normalized Enrichment Score (NES)-1.2458303
Nominal p-value0.09398496
FDR q-value0.91356665
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR4Q25   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAR1GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]9312.2400.0191No
2LEF1lymphoid enhancer binding factor 1 [Source:HGNC Symbol;Acc:HGNC:6551]14521.7430.0394No
3RAC1P5Rac family small GTPase 1 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:30593]16561.5840.0652No
4TOX4P1TOX high mobility group box family member 4 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44009]19411.3900.0850No
5LARP7La ribonucleoprotein 7, transcriptional regulator [Source:HGNC Symbol;Acc:HGNC:24912]26061.0830.0884No
6SEC24BSEC24 homolog B, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10704]27171.0420.1060No
7RBMXP4RBMX pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:34028]34860.7430.0999No
8OSTColigosaccharyltransferase complex non-catalytic subunit [Source:HGNC Symbol;Acc:HGNC:24448]41040.5480.0941No
9LYPLA1P2LYPLA1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44006]43800.4690.0959No
10AP1ARadaptor related protein complex 1 associated regulatory protein [Source:HGNC Symbol;Acc:HGNC:28808]44470.4440.1029No
11FAM241Afamily with sequence similarity 241 member A [Source:HGNC Symbol;Acc:HGNC:26813]52360.2390.0863No
12SETP20SET pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:42939]53970.2390.0867No
13COL25A1collagen type XXV alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:18603]64990.0000.0569No
14ETNPPLethanolamine-phosphate phospho-lyase [Source:HGNC Symbol;Acc:HGNC:14404]65610.0000.0553No
15LINC01438long intergenic non-protein coding RNA 1438 [Source:HGNC Symbol;Acc:HGNC:50757]68500.0000.0475No
16PITX2paired like homeodomain 2 [Source:HGNC Symbol;Acc:HGNC:9005]74200.0000.0321No
17ZNF969Pzinc finger protein 969, pseudogene [Source:HGNC Symbol;Acc:HGNC:44211]89470.000-0.0091No
18KRT19P3keratin 19 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:33424]105710.000-0.0529No
19RNU6-551PRNA, U6 small nuclear 551, pseudogene [Source:HGNC Symbol;Acc:HGNC:47514]107440.000-0.0576No
20RNU6-733PRNA, U6 small nuclear 733, pseudogene [Source:HGNC Symbol;Acc:HGNC:47696]111810.000-0.0694No
21HIGD1AP14HIG1 hypoxia inducible domain family member 1A pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:43009]134380.000-0.1303No
22LRIT3leucine rich repeat, Ig-like and transmembrane domains 3 [Source:HGNC Symbol;Acc:HGNC:24783]145880.000-0.1613No
23RNU6-289PRNA, U6 small nuclear 289, pseudogene [Source:HGNC Symbol;Acc:HGNC:47252]150430.000-0.1736No
24ZACNP1zinc activated ion channel pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:51915]151370.000-0.1761No
25SEC24B-AS1SEC24B antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44003]153460.000-0.1817No
26CFIcomplement factor I [Source:HGNC Symbol;Acc:HGNC:5394]157620.000-0.1929No
27DKK2dickkopf WNT signaling pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:2892]163720.000-0.2094No
28SGMS2sphingomyelin synthase 2 [Source:HGNC Symbol;Acc:HGNC:28395]171920.000-0.2315No
29PANCRPITX2 adjacent non-coding RNA [Source:HGNC Symbol;Acc:HGNC:52282]172130.000-0.2321No
30RPL7L1P13ribosomal protein L7 like 1 pseudogene 13 [Source:HGNC Symbol;Acc:HGNC:44212]183530.000-0.2628No
31OSTCP4oligosaccharyltransferase complex subunit pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:42866]188640.000-0.2766No
32NEUROG2neurogenin 2 [Source:HGNC Symbol;Acc:HGNC:13805]194760.000-0.2931No
33RNU6-431PRNA, U6 small nuclear 431, pseudogene [Source:HGNC Symbol;Acc:HGNC:47394]197180.000-0.2996No
34ZBED1P1zinc finger BED-type containing 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44004]201830.000-0.3122No
35RN7SL275PRNA, 7SL, cytoplasmic 275, pseudogene [Source:HGNC Symbol;Acc:HGNC:46291]206190.000-0.3239No
36COL25A1-DTCOL25A1 divergent transcript [Source:HGNC Symbol;Acc:HGNC:32963]216090.000-0.3506No
37LEF1-AS1LEF1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40339]233790.000-0.3984No
38ENPEPglutamyl aminopeptidase [Source:HGNC Symbol;Acc:HGNC:3355]245420.000-0.4298No
39RN7SL55PRNA, 7SL, cytoplasmic 55, pseudogene [Source:HGNC Symbol;Acc:HGNC:46071]248830.000-0.4390No
40RNU6-205PRNA, U6 small nuclear 205, pseudogene [Source:HGNC Symbol;Acc:HGNC:47168]251870.000-0.4472No
41RRHretinal pigment epithelium-derived rhodopsin homolog [Source:HGNC Symbol;Acc:HGNC:10450]254390.000-0.4540No
42WRBP1tryptophan rich basic protein pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44010]256340.000-0.4592No
43MIR302DmicroRNA 302d [Source:HGNC Symbol;Acc:HGNC:31765]257700.000-0.4629No
44MIR302CmicroRNA 302c [Source:HGNC Symbol;Acc:HGNC:31764]257720.000-0.4629No
45MIR302AmicroRNA 302a [Source:HGNC Symbol;Acc:HGNC:31623]257740.000-0.4629No
46MIR297microRNA 297 [Source:HGNC Symbol;Acc:HGNC:33691]258290.000-0.4644No
47RPL34-DTRPL34 divergent transcript [Source:HGNC Symbol;Acc:HGNC:26749]259300.000-0.4671No
48HSBP1P2heat shock factor binding protein 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:37300]261190.000-0.4721No
49MIR576microRNA 576 [Source:HGNC Symbol;Acc:HGNC:32832]262990.000-0.4770No
50ACTR6P1ACTR6 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44210]267260.000-0.4885No
51CCDC34P1coiled-coil domain containing 34 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44008]268650.000-0.4922No
52MIR367microRNA 367 [Source:HGNC Symbol;Acc:HGNC:31781]270950.000-0.4984No
53RNU6-35PRNA, U6 small nuclear 35, pseudogene [Source:HGNC Symbol;Acc:HGNC:34279]273280.000-0.5047No
54RPSAP34ribosomal protein SA pseudogene 34 [Source:HGNC Symbol;Acc:HGNC:36643]275520.000-0.5107No
55RPL7AP30ribosomal protein L7a pseudogene 30 [Source:HGNC Symbol;Acc:HGNC:35757]29644-0.275-0.5617No
56RPL34ribosomal protein L34 [Source:HGNC Symbol;Acc:HGNC:10340]29731-0.298-0.5582No
57TUBB8P3tubulin beta 8 class VIII pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:42338]31083-0.639-0.5821No
58ANK2ankyrin 2 [Source:HGNC Symbol;Acc:HGNC:493]31940-0.892-0.5876Yes
59RPL23AP94ribosomal protein L23a pseudogene 94 [Source:HGNC Symbol;Acc:HGNC:51629]32313-1.023-0.5774Yes
60RCC2P8regulator of chromosome condensation 2 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:42384]32648-1.132-0.5641Yes
61MCUBmitochondrial calcium uniporter dominant negative subunit beta [Source:HGNC Symbol;Acc:HGNC:26076]32708-1.150-0.5430Yes
62CYP2U1cytochrome P450 family 2 subfamily U member 1 [Source:HGNC Symbol;Acc:HGNC:20582]33062-1.279-0.5273Yes
63RTEL1P1regulator of telomere elongation helicase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:44213]33184-1.326-0.5044Yes
64ALPK1alpha kinase 1 [Source:HGNC Symbol;Acc:HGNC:20917]33235-1.351-0.4791Yes
65CASP6caspase 6 [Source:HGNC Symbol;Acc:HGNC:1507]34349-1.786-0.4739Yes
66ZGRF1zinc finger GRF-type containing 1 [Source:HGNC Symbol;Acc:HGNC:25654]34466-1.841-0.4407Yes
67CDC42P4cell division cycle 42 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:44428]35331-2.332-0.4180Yes
68EGFepidermal growth factor [Source:HGNC Symbol;Acc:HGNC:3229]35525-2.501-0.3739Yes
69EXOC7P1exocyst complex component 7 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:43871]35590-2.555-0.3252Yes
70ELOVL6ELOVL fatty acid elongase 6 [Source:HGNC Symbol;Acc:HGNC:15829]35985-2.910-0.2784Yes
71PAPSS13'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:HGNC Symbol;Acc:HGNC:8603]36403-3.391-0.2227Yes
72HADHhydroxyacyl-CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4799]36680-3.784-0.1555Yes
73TIFATRAF interacting protein with forkhead associated domain [Source:HGNC Symbol;Acc:HGNC:19075]36832-4.051-0.0796Yes
74PLA2G12Aphospholipase A2 group XIIA [Source:HGNC Symbol;Acc:HGNC:18554]36958-4.3870.0036Yes
Table: GSEA details [plain text format]



Fig 2: CHR4Q25   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR4Q25: Random ES distribution   
Gene set null distribution of ES for CHR4Q25