Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCHR6Q14
Enrichment Score (ES)-0.66762847
Normalized Enrichment Score (NES)-1.3983986
Nominal p-value0.014563107
FDR q-value0.36312455
FWER p-Value0.939
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR6Q14   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SYNCRIPsynaptotagmin binding cytoplasmic RNA interacting protein [Source:HGNC Symbol;Acc:HGNC:16918]21821.247-0.0317No
2ME1malic enzyme 1 [Source:HGNC Symbol;Acc:HGNC:6983]25801.097-0.0185No
3SH3BGRL2SH3 domain binding glutamate rich protein like 2 [Source:HGNC Symbol;Acc:HGNC:15567]26931.0510.0014No
4TENT5Aterminal nucleotidyltransferase 5A [Source:HGNC Symbol;Acc:HGNC:18345]29670.9440.0147No
5SENP6SUMO specific peptidase 6 [Source:HGNC Symbol;Acc:HGNC:20944]33710.7850.0209No
6ZNF292zinc finger protein 292 [Source:HGNC Symbol;Acc:HGNC:18410]44840.4360.0004No
7CYB5R4cytochrome b5 reductase 4 [Source:HGNC Symbol;Acc:HGNC:20147]45330.4210.0083No
8TPBGtrophoblast glycoprotein [Source:HGNC Symbol;Acc:HGNC:12004]49640.3010.0032No
9SMARCE1P2SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39732]53310.239-0.0014No
10IBTKinhibitor of Bruton tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:17853]57060.188-0.0074No
11COL12A1collagen type XII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2188]58480.146-0.0081No
12COX7A2cytochrome c oxidase subunit 7A2 [Source:HGNC Symbol;Acc:HGNC:2288]61030.068-0.0134No
13PRSS35serine protease 35 [Source:HGNC Symbol;Acc:HGNC:21387]64300.000-0.0222No
14LINC01621long intergenic non-protein coding RNA 1621 [Source:HGNC Symbol;Acc:HGNC:14109]73010.000-0.0457No
15LINC01611long intergenic non-protein coding RNA 1611 [Source:HGNC Symbol;Acc:HGNC:51791]73240.000-0.0463No
16LINC01526long intergenic non-protein coding RNA 1526 [Source:HGNC Symbol;Acc:HGNC:51265]76960.000-0.0564No
17RNU6-130PRNA, U6 small nuclear 130, pseudogene [Source:HGNC Symbol;Acc:HGNC:47093]84850.000-0.0777No
18RNU6-155PRNA, U6 small nuclear 155, pseudogene [Source:HGNC Symbol;Acc:HGNC:47118]91060.000-0.0944No
19AK4P5adenylate kinase 4 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:39068]92040.000-0.0970No
20MTHFD2P2methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:48860]92850.000-0.0992No
21UBE2V1P15ubiquitin conjugating enzyme E2 V1 pseudogene 15 [Source:HGNC Symbol;Acc:HGNC:52414]106850.000-0.1370No
22HMGB1P39high mobility group box 1 pseudogene 39 [Source:HGNC Symbol;Acc:HGNC:39186]109870.000-0.1451No
23RNU4-72PRNA, U4 small nuclear 72, pseudogene [Source:HGNC Symbol;Acc:HGNC:47008]110200.000-0.1460No
24RN7SL643PRNA, 7SL, cytoplasmic 643, pseudogene [Source:HGNC Symbol;Acc:HGNC:46659]111170.000-0.1486No
25TBX18-AS1TBX18 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:52256]119240.000-0.1704No
26RNU6-1338PRNA, U6 small nuclear 1338, pseudogene [Source:HGNC Symbol;Acc:HGNC:48301]120760.000-0.1744No
27MRAP2melanocortin 2 receptor accessory protein 2 [Source:HGNC Symbol;Acc:HGNC:21232]138120.000-0.2213No
28RNU6-261PRNA, U6 small nuclear 261, pseudogene [Source:HGNC Symbol;Acc:HGNC:47224]142330.000-0.2327No
29DBIP1DBI pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:2692]145830.000-0.2421No
30LINC02540long intergenic non-protein coding RNA 2540 [Source:HGNC Symbol;Acc:HGNC:53573]146330.000-0.2434No
31LINC02542long intergenic non-protein coding RNA 2542 [Source:HGNC Symbol;Acc:HGNC:53576]146340.000-0.2434No
32LINC02535long intergenic non-protein coding RNA 2535 [Source:HGNC Symbol;Acc:HGNC:53569]146440.000-0.2437No
33HTR1E5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]155700.000-0.2687No
34TBX18T-box transcription factor 18 [Source:HGNC Symbol;Acc:HGNC:11595]157330.000-0.2730No
35CGAglycoprotein hormones, alpha polypeptide [Source:HGNC Symbol;Acc:HGNC:1885]157660.000-0.2739No
36SNORA70small nucleolar RNA, H/ACA box 70 [Source:HGNC Symbol;Acc:HGNC:10231]161480.000-0.2842No
37MEI4meiotic double-stranded break formation protein 4 [Source:HGNC Symbol;Acc:HGNC:43638]164120.000-0.2913No
38RN7SKP209RN7SK pseudogene 209 [Source:HGNC Symbol;Acc:HGNC:45933]182360.000-0.3406No
39SMIM11P1small integral membrane protein 11 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:21400]185840.000-0.3499No
40RNU6-248PRNA, U6 small nuclear 248, pseudogene [Source:HGNC Symbol;Acc:HGNC:47211]193680.000-0.3711No
41SNHG5small nucleolar RNA host gene 5 [Source:HGNC Symbol;Acc:HGNC:21026]194340.000-0.3729No
42RNA5SP209RNA, 5S ribosomal pseudogene 209 [Source:HGNC Symbol;Acc:HGNC:43109]194640.000-0.3736No
43RNA5SP210RNA, 5S ribosomal pseudogene 210 [Source:HGNC Symbol;Acc:HGNC:43110]195090.000-0.3748No
44KRT18P64keratin 18 pseudogene 64 [Source:HGNC Symbol;Acc:HGNC:48891]205900.000-0.4040No
45RNU4-12PRNA, U4 small nuclear 12, pseudogene [Source:HGNC Symbol;Acc:HGNC:46948]208480.000-0.4110No
46HMGN3high mobility group nucleosomal binding domain 3 [Source:HGNC Symbol;Acc:HGNC:12312]217090.000-0.4342No
47SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]218730.000-0.4386No
48MIR4463microRNA 4463 [Source:HGNC Symbol;Acc:HGNC:41665]228720.000-0.4656No
49LAP3P1leucine aminopeptidase 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42364]231310.000-0.4725No
50ELOVL4ELOVL fatty acid elongase 4 [Source:HGNC Symbol;Acc:HGNC:14415]231420.000-0.4728No
51RNU1-34PRNA, U1 small nuclear 34, pseudogene [Source:HGNC Symbol;Acc:HGNC:48376]234130.000-0.4801No
52RIPPLY2ripply transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:21390]234410.000-0.4808No
53FILIP1filamin A interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:21015]234640.000-0.4814No
54IMPG1interphotoreceptor matrix proteoglycan 1 [Source:HGNC Symbol;Acc:HGNC:6055]234830.000-0.4819No
55RNU6-1016PRNA, U6 small nuclear 1016, pseudogene [Source:HGNC Symbol;Acc:HGNC:47979]244320.000-0.5075No
56RN7SKP163RN7SK pseudogene 163 [Source:HGNC Symbol;Acc:HGNC:45887]251620.000-0.5272No
57NDUFA5P9NADH:ubiquinone oxidoreductase subunit A5 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:48851]263380.000-0.5590No
58HMGN3-AS1HMGN3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:48984]268980.000-0.5741No
59RPSAP72ribosomal protein SA pseudogene 72 [Source:HGNC Symbol;Acc:HGNC:51925]274820.000-0.5898No
60TPT1P6tumor protein, translationally-controlled 1 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:49297]28530-0.004-0.6180No
61HSPD1P10heat shock protein family D (Hsp60) member 1 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:35131]28842-0.080-0.6247No
62TMEM30Atransmembrane protein 30A [Source:HGNC Symbol;Acc:HGNC:16667]29561-0.253-0.6386No
63PHIPpleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]30638-0.523-0.6562Yes
64RPL7P29ribosomal protein L7 pseudogene 29 [Source:HGNC Symbol;Acc:HGNC:35700]30749-0.555-0.6471Yes
65DOP1ADOP1 leucine zipper like protein A [Source:HGNC Symbol;Acc:HGNC:21194]30982-0.605-0.6401Yes
66PGM3phosphoglucomutase 3 [Source:HGNC Symbol;Acc:HGNC:8907]31316-0.708-0.6336Yes
67CEP162centrosomal protein 162 [Source:HGNC Symbol;Acc:HGNC:21107]31605-0.770-0.6246Yes
68BCKDHBbranched chain keto acid dehydrogenase E1 subunit beta [Source:HGNC Symbol;Acc:HGNC:987]31937-0.892-0.6141Yes
69LCA5lebercilin LCA5 [Source:HGNC Symbol;Acc:HGNC:31923]33633-1.452-0.6282Yes
70PKMP3pyruvate kinase M1/2 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:44245]34377-1.795-0.6090Yes
71IRAK1BP1interleukin 1 receptor associated kinase 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17368]34463-1.840-0.5712Yes
72SNX14sorting nexin 14 [Source:HGNC Symbol;Acc:HGNC:14977]34711-1.975-0.5347Yes
73UBE3Dubiquitin protein ligase E3D [Source:HGNC Symbol;Acc:HGNC:21381]34717-1.981-0.4916Yes
74GAPDHP63glyceraldehyde 3 phosphate dehydrogenase pseudogene 63 [Source:HGNC Symbol;Acc:HGNC:4157]34789-2.042-0.4489Yes
75NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]35161-2.294-0.4088Yes
76TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35185-2.308-0.3590Yes
77RCN1P1reticulocalbin 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:39205]35225-2.316-0.3095Yes
78RPL7P27ribosomal protein L7 pseudogene 27 [Source:HGNC Symbol;Acc:HGNC:36649]35657-2.608-0.2642Yes
79MYO6myosin VI [Source:HGNC Symbol;Acc:HGNC:7605]35765-2.692-0.2083Yes
80RWDD2ARWD domain containing 2A [Source:HGNC Symbol;Acc:HGNC:21385]36510-3.503-0.1519Yes
81DUTP5deoxyuridine triphosphatase pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:39518]36516-3.519-0.0752Yes
82HTR1B5-hydroxytryptamine receptor 1B [Source:HGNC Symbol;Acc:HGNC:5287]36871-4.1510.0059Yes
Table: GSEA details [plain text format]



Fig 2: CHR6Q14   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR6Q14: Random ES distribution   
Gene set null distribution of ES for CHR6Q14