Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCROONQUIST_NRAS_SIGNALING_DN
Enrichment Score (ES)-0.80308276
Normalized Enrichment Score (NES)-1.6416236
Nominal p-value0.0
FDR q-value0.013765815
FWER p-Value0.249
Table: GSEA Results Summary



Fig 1: Enrichment plot: CROONQUIST_NRAS_SIGNALING_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SBNO2strawberry notch homolog 2 [Source:HGNC Symbol;Acc:HGNC:29158]3443.4010.0172No
2EIF5eukaryotic translation initiation factor 5 [Source:HGNC Symbol;Acc:HGNC:3299]24571.143-0.0310No
3MYRFmyelin regulatory factor [Source:HGNC Symbol;Acc:HGNC:1181]33780.782-0.0497No
4SNRPA1small nuclear ribonucleoprotein polypeptide A' [Source:HGNC Symbol;Acc:HGNC:11152]36090.700-0.0505No
5GNAI1G protein subunit alpha i1 [Source:HGNC Symbol;Acc:HGNC:4384]40980.550-0.0594No
6PLOD2procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Source:HGNC Symbol;Acc:HGNC:9082]45700.412-0.0689No
7HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]49780.295-0.0776No
8APOBEC3Bapolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]124870.000-0.2804No
9CENPAcentromere protein A [Source:HGNC Symbol;Acc:HGNC:1851]212590.000-0.5173No
10ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]235510.000-0.5792No
11CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]28955-0.111-0.7243No
12PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]30002-0.356-0.7498No
13CSE1Lchromosome segregation 1 like [Source:HGNC Symbol;Acc:HGNC:2431]30622-0.519-0.7625No
14CKS1BCDC28 protein kinase regulatory subunit 1B [Source:HGNC Symbol;Acc:HGNC:19083]31156-0.662-0.7717No
15OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]31183-0.669-0.7672No
16BRD8bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]32512-1.089-0.7946Yes
17TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]32541-1.098-0.7868Yes
18SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]32582-1.110-0.7793Yes
19HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]32901-1.221-0.7783Yes
20RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]32933-1.233-0.7696Yes
21TRAIPTRAF interacting protein [Source:HGNC Symbol;Acc:HGNC:30764]32956-1.242-0.7605Yes
22AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]33083-1.285-0.7539Yes
23CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]33194-1.331-0.7465Yes
24TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]33198-1.332-0.7362Yes
25MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33400-1.422-0.7306Yes
26MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]33442-1.442-0.7205Yes
27POLD3DNA polymerase delta 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:20932]33701-1.476-0.7159Yes
28CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]33722-1.484-0.7049Yes
29PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33797-1.517-0.6951Yes
30PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]33895-1.555-0.6856Yes
31CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]33991-1.612-0.6756Yes
32SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]34102-1.666-0.6657Yes
33PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34155-1.691-0.6539Yes
34KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]34210-1.718-0.6420Yes
35UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34312-1.770-0.6309Yes
36SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]34343-1.784-0.6179Yes
37SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]34487-1.852-0.6073Yes
38BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]34488-1.854-0.5929Yes
39GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]34533-1.882-0.5794Yes
40CDC25Ccell division cycle 25C [Source:HGNC Symbol;Acc:HGNC:1727]34537-1.884-0.5648Yes
41TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]34662-1.944-0.5530Yes
42NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]34681-1.952-0.5383Yes
43KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]34689-1.957-0.5233Yes
44NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]34879-2.099-0.5121Yes
45STILSTIL centriolar assembly protein [Source:HGNC Symbol;Acc:HGNC:10879]34921-2.127-0.4966Yes
46KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]35069-2.220-0.4833Yes
47RAD51CRAD51 paralog C [Source:HGNC Symbol;Acc:HGNC:9820]35200-2.313-0.4688Yes
48CHEK1checkpoint kinase 1 [Source:HGNC Symbol;Acc:HGNC:1925]35205-2.315-0.4509Yes
49PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35306-2.318-0.4355Yes
50FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]35329-2.329-0.4180Yes
51NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]35378-2.378-0.4008Yes
52GALEUDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]35465-2.446-0.3841Yes
53AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]35466-2.446-0.3650Yes
54MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35567-2.531-0.3480Yes
55CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]35581-2.547-0.3286Yes
56CHAF1Achromatin assembly factor 1 subunit A [Source:HGNC Symbol;Acc:HGNC:1910]35614-2.578-0.3093Yes
57MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]35643-2.607-0.2898Yes
58WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]35705-2.646-0.2709Yes
59STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]35813-2.748-0.2524Yes
60H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]35814-2.749-0.2310Yes
61DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]35839-2.770-0.2100Yes
62CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]35850-2.788-0.1886Yes
63POLD1DNA polymerase delta 1, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9175]36079-3.005-0.1714Yes
64CHEK2checkpoint kinase 2 [Source:HGNC Symbol;Acc:HGNC:16627]36144-3.094-0.1490Yes
65PTP4A3protein tyrosine phosphatase 4A3 [Source:HGNC Symbol;Acc:HGNC:9636]36323-3.270-0.1284Yes
66MYBL2MYB proto-oncogene like 2 [Source:HGNC Symbol;Acc:HGNC:7548]36366-3.344-0.1035Yes
67MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36496-3.483-0.0799Yes
68GPX4glutathione peroxidase 4 [Source:HGNC Symbol;Acc:HGNC:4556]36720-3.854-0.0559Yes
69CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]36809-4.009-0.0270Yes
70TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]36977-4.4460.0031Yes
Table: GSEA details [plain text format]



Fig 2: CROONQUIST_NRAS_SIGNALING_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CROONQUIST_NRAS_SIGNALING_DN: Random ES distribution   
Gene set null distribution of ES for CROONQUIST_NRAS_SIGNALING_DN