Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetGNF2_SMC4L1
Enrichment Score (ES)-0.7637351
Normalized Enrichment Score (NES)-1.599045
Nominal p-value0.0
FDR q-value0.008089143
FWER p-Value0.148
Table: GSEA Results Summary



Fig 1: Enrichment plot: GNF2_SMC4L1   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAR1GAR1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:14264]9312.240-0.0096No
2DNAJC9DnaJ heat shock protein family (Hsp40) member C9 [Source:HGNC Symbol;Acc:HGNC:19123]17541.519-0.0213No
3DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]24881.134-0.0332No
4EIF2S1eukaryotic translation initiation factor 2 subunit alpha [Source:HGNC Symbol;Acc:HGNC:3265]26421.066-0.0299No
5CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]28370.990-0.0283No
6HNRNPABheterogeneous nuclear ribonucleoprotein A/B [Source:HGNC Symbol;Acc:HGNC:5034]33080.797-0.0355No
7SRSF1serine and arginine rich splicing factor 1 [Source:HGNC Symbol;Acc:HGNC:10780]34190.766-0.0331No
8NUP153nucleoporin 153 [Source:HGNC Symbol;Acc:HGNC:8062]37140.670-0.0364No
9MRPL35mitochondrial ribosomal protein L35 [Source:HGNC Symbol;Acc:HGNC:14489]38130.639-0.0346No
10DHFRdihydrofolate reductase [Source:HGNC Symbol;Acc:HGNC:2861]155180.000-0.3509No
11ZWINTZW10 interacting kinetochore protein [Source:HGNC Symbol;Acc:HGNC:13195]235510.000-0.5679No
12SNRPGsmall nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:HGNC:11163]28591-0.018-0.7040No
13CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]28955-0.111-0.7130No
14ANP32Eacidic nuclear phosphoprotein 32 family member E [Source:HGNC Symbol;Acc:HGNC:16673]29197-0.176-0.7183No
15SERBP1SERPINE1 mRNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:17860]29339-0.207-0.7207No
16SNRPD1small nuclear ribonucleoprotein D1 polypeptide [Source:HGNC Symbol;Acc:HGNC:11158]29473-0.232-0.7226No
17SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]30062-0.369-0.7360No
18ANP32Bacidic nuclear phosphoprotein 32 family member B [Source:HGNC Symbol;Acc:HGNC:16677]30136-0.388-0.7352No
19COPS3COP9 signalosome subunit 3 [Source:HGNC Symbol;Acc:HGNC:2239]30908-0.592-0.7520No
20SUPT16HSPT16 homolog, facilitates chromatin remodeling subunit [Source:HGNC Symbol;Acc:HGNC:11465]31046-0.627-0.7513No
21ZWILCHzwilch kinetochore protein [Source:HGNC Symbol;Acc:HGNC:25468]31242-0.686-0.7518No
22HNRNPA3P1heterogeneous nuclear ribonucleoprotein A3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:13729]31370-0.725-0.7502No
23METAP2methionyl aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:16672]31619-0.774-0.7515No
24SSRP1structure specific recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:11327]31689-0.798-0.7479No
25TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32001-0.913-0.7499No
26FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]32513-1.089-0.7562Yes
27PCCBpropionyl-CoA carboxylase subunit beta [Source:HGNC Symbol;Acc:HGNC:8654]32575-1.108-0.7501Yes
28SMC4structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]32582-1.110-0.7426Yes
29USP1ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:HGNC:12607]32614-1.123-0.7356Yes
30HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]32901-1.221-0.7349Yes
31RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]32933-1.233-0.7271Yes
32EXOSC8exosome component 8 [Source:HGNC Symbol;Acc:HGNC:17035]33033-1.266-0.7210Yes
33AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]33083-1.285-0.7134Yes
34HAT1histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821]33146-1.310-0.7060Yes
35FANCIFA complementation group I [Source:HGNC Symbol;Acc:HGNC:25568]33326-1.384-0.7012Yes
36MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]33400-1.422-0.6933Yes
37GINS2GINS complex subunit 2 [Source:HGNC Symbol;Acc:HGNC:24575]33419-1.430-0.6839Yes
38MCM4minichromosome maintenance complex component 4 [Source:HGNC Symbol;Acc:HGNC:6947]33442-1.442-0.6744Yes
39VRK1VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]33445-1.443-0.6645Yes
40CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]33571-1.451-0.6578Yes
41CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]33722-1.484-0.6515Yes
42PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]33797-1.517-0.6430Yes
43SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]33799-1.519-0.6325Yes
44PLK4polo like kinase 4 [Source:HGNC Symbol;Acc:HGNC:11397]34155-1.691-0.6303Yes
45KIF18Bkinesin family member 18B [Source:HGNC Symbol;Acc:HGNC:27102]34182-1.707-0.6191Yes
46SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]34487-1.852-0.6145Yes
47BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]34488-1.854-0.6016Yes
48GINS1GINS complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:28980]34533-1.882-0.5897Yes
49DEKDEK proto-oncogene [Source:HGNC Symbol;Acc:HGNC:2768]34556-1.897-0.5772Yes
50TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]34662-1.944-0.5665Yes
51HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]34669-1.947-0.5531Yes
52NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]34681-1.952-0.5399Yes
53KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]34689-1.957-0.5265Yes
54RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]34774-2.027-0.5147Yes
55PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]34782-2.033-0.5007Yes
56NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]34879-2.099-0.4887Yes
57CBX3chromobox 3 [Source:HGNC Symbol;Acc:HGNC:1553]34909-2.119-0.4748Yes
58RFC4replication factor C subunit 4 [Source:HGNC Symbol;Acc:HGNC:9972]34919-2.126-0.4603Yes
59MCM5minichromosome maintenance complex component 5 [Source:HGNC Symbol;Acc:HGNC:6948]35037-2.200-0.4482Yes
60NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]35078-2.229-0.4338Yes
61TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35185-2.308-0.4206Yes
62PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35306-2.318-0.4077Yes
63FOXM1forkhead box M1 [Source:HGNC Symbol;Acc:HGNC:3818]35329-2.329-0.3922Yes
64PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35520-2.493-0.3800Yes
65TMPOthymopoietin [Source:HGNC Symbol;Acc:HGNC:11875]35541-2.516-0.3630Yes
66MCM2minichromosome maintenance complex component 2 [Source:HGNC Symbol;Acc:HGNC:6944]35567-2.531-0.3461Yes
67DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35576-2.541-0.3287Yes
68CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]35581-2.547-0.3111Yes
69ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]35708-2.647-0.2961Yes
70RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]35725-2.658-0.2781Yes
71DTYMKdeoxythymidylate kinase [Source:HGNC Symbol;Acc:HGNC:3061]35742-2.678-0.2599Yes
72H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]35814-2.749-0.2428Yes
73DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]35839-2.770-0.2242Yes
74CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]35850-2.788-0.2051Yes
75CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]35994-2.919-0.1887Yes
76CKAP2cytoskeleton associated protein 2 [Source:HGNC Symbol;Acc:HGNC:1990]36112-3.054-0.1706Yes
77E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36290-3.231-0.1529Yes
78DTLdenticleless E3 ubiquitin protein ligase homolog [Source:HGNC Symbol;Acc:HGNC:30288]36367-3.347-0.1317Yes
79POLE2DNA polymerase epsilon 2, accessory subunit [Source:HGNC Symbol;Acc:HGNC:9178]36383-3.368-0.1088Yes
80FBXO5F-box protein 5 [Source:HGNC Symbol;Acc:HGNC:13584]36456-3.450-0.0867Yes
81MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36496-3.483-0.0636Yes
82RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36693-3.791-0.0426Yes
83MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36701-3.805-0.0163Yes
84GMNNgeminin DNA replication inhibitor [Source:HGNC Symbol;Acc:HGNC:17493]36724-3.8580.0099Yes
Table: GSEA details [plain text format]



Fig 2: GNF2_SMC4L1   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GNF2_SMC4L1: Random ES distribution   
Gene set null distribution of ES for GNF2_SMC4L1