Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetGOCC_PRERIBOSOME
Enrichment Score (ES)0.75127745
Normalized Enrichment Score (NES)1.8226765
Nominal p-value0.0
FDR q-value0.13436142
FWER p-Value0.307
Table: GSEA Results Summary



Fig 1: Enrichment plot: GOCC_PRERIBOSOME   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PWP2PWP2 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:9711]1304.2100.0447Yes
2BOP1BOP1 ribosomal biogenesis factor [Source:HGNC Symbol;Acc:HGNC:15519]3273.4620.0791Yes
3RSL1D1ribosomal L1 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24534]4792.9840.1092Yes
4RRP15ribosomal RNA processing 15 homolog [Source:HGNC Symbol;Acc:HGNC:24255]5552.8150.1394Yes
5RIOK3RIO kinase 3 [Source:HGNC Symbol;Acc:HGNC:11451]5672.7940.1711Yes
6RIOK2RIO kinase 2 [Source:HGNC Symbol;Acc:HGNC:18999]7002.6070.1974Yes
7UTP23UTP23 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:28224]8882.3030.2187Yes
8TSR1TSR1 ribosome maturation factor [Source:HGNC Symbol;Acc:HGNC:25542]9572.2030.2421Yes
9HEATR1HEAT repeat containing 1 [Source:HGNC Symbol;Acc:HGNC:25517]9772.1840.2666Yes
10FP565260.1periodic tryptophan protein 2 homolog [Source:NCBI gene (formerly Entrezgene);Acc:102724159]10092.1330.2902Yes
11NOC4Lnucleolar complex associated 4 homolog [Source:HGNC Symbol;Acc:HGNC:28461]10512.0850.3130Yes
12UTP4UTP4 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:1983]11161.9930.3341Yes
13UTP20UTP20 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:17897]12071.8870.3533Yes
14MDN1midasin AAA ATPase 1 [Source:HGNC Symbol;Acc:HGNC:18302]13561.8660.3707Yes
15RRP9ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]13671.8500.3916Yes
16NOP58NOP58 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:29926]13821.8300.4122Yes
17NIP7nucleolar pre-rRNA processing protein NIP7 [Source:HGNC Symbol;Acc:HGNC:24328]14651.7340.4298Yes
18UTP25UTP25 small subunit processor component [Source:HGNC Symbol;Acc:HGNC:28440]15061.7050.4483Yes
19WDR46WD repeat domain 46 [Source:HGNC Symbol;Acc:HGNC:13923]15381.6780.4667Yes
20PDCD11programmed cell death 11 [Source:HGNC Symbol;Acc:HGNC:13408]17491.5210.4784Yes
21BMS1BMS1 ribosome biogenesis factor [Source:HGNC Symbol;Acc:HGNC:23505]17981.4880.4942Yes
22LTV1LTV1 ribosome biogenesis factor [Source:HGNC Symbol;Acc:HGNC:21173]18501.4630.5095Yes
23RIOK1RIO kinase 1 [Source:HGNC Symbol;Acc:HGNC:18656]18781.4420.5253Yes
24NOL6nucleolar protein 6 [Source:HGNC Symbol;Acc:HGNC:19910]18931.4280.5413Yes
25MRTO4MRT4 homolog, ribosome maturation factor [Source:HGNC Symbol;Acc:HGNC:18477]19031.4190.5573Yes
26NOL10nucleolar protein 10 [Source:HGNC Symbol;Acc:HGNC:25862]19691.3770.5713Yes
27EIF6eukaryotic translation initiation factor 6 [Source:HGNC Symbol;Acc:HGNC:6159]21451.2690.5811Yes
28WDR37WD repeat domain 37 [Source:HGNC Symbol;Acc:HGNC:31406]23001.2230.5910Yes
29WDR12WD repeat domain 12 [Source:HGNC Symbol;Acc:HGNC:14098]23141.2160.6046Yes
30NOP14NOP14 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:16821]23191.2120.6183Yes
31RRP7BPribosomal RNA processing 7 homolog B, pseudogene [Source:HGNC Symbol;Acc:HGNC:30454]23591.1920.6309Yes
32EMG1EMG1 N1-specific pseudouridine methyltransferase [Source:HGNC Symbol;Acc:HGNC:16912]25051.1270.6399Yes
33EBNA1BP2EBNA1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15531]25401.1120.6517Yes
34RRS1ribosome biogenesis regulator 1 homolog [Source:HGNC Symbol;Acc:HGNC:17083]25521.1110.6642Yes
35RRP36ribosomal RNA processing 36 [Source:HGNC Symbol;Acc:HGNC:21374]26801.0540.6728Yes
36BYSLbystin like [Source:HGNC Symbol;Acc:HGNC:1157]26851.0530.6848Yes
37RPF1ribosome production factor 1 homolog [Source:HGNC Symbol;Acc:HGNC:30350]27341.0350.6953Yes
38SNU13small nuclear ribonucleoprotein 13 [Source:HGNC Symbol;Acc:HGNC:7819]27561.0230.7065Yes
39FTSJ3FtsJ RNA 2'-O-methyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:17136]28081.0030.7166Yes
40MPHOSPH10M-phase phosphoprotein 10 [Source:HGNC Symbol;Acc:HGNC:7213]29090.9540.7248Yes
41IMP4IMP U3 small nucleolar ribonucleoprotein 4 [Source:HGNC Symbol;Acc:HGNC:30856]31640.8550.7277Yes
42DCAF13DDB1 and CUL4 associated factor 13 [Source:HGNC Symbol;Acc:HGNC:24535]34960.7370.7272Yes
43SRFBP1serum response factor binding protein 1 [Source:HGNC Symbol;Acc:HGNC:26333]35100.7320.7353Yes
44UTP6UTP6 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:18279]35800.7090.7415Yes
45NOP56NOP56 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:15911]37320.6620.7450Yes
46MAK16MAK16 homolog [Source:HGNC Symbol;Acc:HGNC:13703]38070.6400.7504Yes
47TBL3transducin beta like 3 [Source:HGNC Symbol;Acc:HGNC:11587]42820.4940.7432Yes
48RRP7Aribosomal RNA processing 7 homolog A [Source:HGNC Symbol;Acc:HGNC:24286]43580.4750.7466Yes
49PES1pescadillo ribosomal biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:8848]43860.4690.7513Yes
50XRCC5X-ray repair cross complementing 5 [Source:HGNC Symbol;Acc:HGNC:12833]46660.3820.7481No
51FBLfibrillarin [Source:HGNC Symbol;Acc:HGNC:3599]47580.3560.7497No
52RRP1Bribosomal RNA processing 1B [Source:HGNC Symbol;Acc:HGNC:23818]49290.3090.7487No
53WDR74WD repeat domain 74 [Source:HGNC Symbol;Acc:HGNC:25529]57180.1860.7295No
54KRR1KRR1 small subunit processome component homolog [Source:HGNC Symbol;Acc:HGNC:5176]57340.1810.7312No
55WDR36WD repeat domain 36 [Source:HGNC Symbol;Acc:HGNC:30696]57740.1660.7320No
56UTP11UTP11 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24329]58020.1590.7331No
57LAS1LLAS1 like ribosome biogenesis factor [Source:HGNC Symbol;Acc:HGNC:25726]58080.1580.7348No
58NOP9NOP9 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:19826]58100.1570.7366No
59UTP14CUTP14C small subunit processome component [Source:HGNC Symbol;Acc:HGNC:20321]58280.1500.7378No
60WDR3WD repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:12755]61460.0570.7299No
61UTP18UTP18 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24274]28647-0.0340.1224No
62NOC2LNOC2 like nucleolar associated transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:24517]28786-0.0680.1195No
63KRI1KRI1 homolog [Source:HGNC Symbol;Acc:HGNC:25769]28846-0.0820.1188No
64UTP14AUTP14A small subunit processome component [Source:HGNC Symbol;Acc:HGNC:10665]28863-0.0870.1194No
65NGDNneuroguidin [Source:HGNC Symbol;Acc:HGNC:20271]28971-0.1140.1178No
66ZNF622zinc finger protein 622 [Source:HGNC Symbol;Acc:HGNC:30958]29425-0.2210.1081No
67RPS7ribosomal protein S7 [Source:HGNC Symbol;Acc:HGNC:10440]29466-0.2300.1096No
68PPANpeter pan homolog [Source:HGNC Symbol;Acc:HGNC:9227]29778-0.3080.1048No
69FBXW9F-box and WD repeat domain containing 9 [Source:HGNC Symbol;Acc:HGNC:28136]30077-0.3730.1010No
70NSA2NSA2 ribosome biogenesis factor [Source:HGNC Symbol;Acc:HGNC:30728]30172-0.4020.1030No
71FAM207Afamily with sequence similarity 207 member A [Source:HGNC Symbol;Acc:HGNC:15811]30495-0.4810.0998No
72FCF1FCF1 rRNA-processing protein [Source:HGNC Symbol;Acc:HGNC:20220]30617-0.5170.1025No
73RRP1ribosomal RNA processing 1 [Source:HGNC Symbol;Acc:HGNC:18785]31097-0.6440.0969No
74NOB1NIN1 (RPN12) binding protein 1 homolog [Source:HGNC Symbol;Acc:HGNC:29540]31162-0.6630.1028No
75UTP3UTP3 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24477]31411-0.7350.1045No
76IMP3IMP U3 small nucleolar ribonucleoprotein 3 [Source:HGNC Symbol;Acc:HGNC:14497]31769-0.8270.1044No
77FBLL1fibrillarin like 1 [Source:HGNC Symbol;Acc:HGNC:35458]31922-0.8810.1103No
78PRKDCprotein kinase, DNA-activated, catalytic subunit [Source:HGNC Symbol;Acc:HGNC:9413]35589-2.5540.0406No
Table: GSEA details [plain text format]



Fig 2: GOCC_PRERIBOSOME   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: GOCC_PRERIBOSOME: Random ES distribution   
Gene set null distribution of ES for GOCC_PRERIBOSOME