Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetBMI1_DN_MEL18_DN.V1_UP
Enrichment Score (ES)0.50163513
Normalized Enrichment Score (NES)1.3198322
Nominal p-value0.0
FDR q-value0.14566354
FWER p-Value0.369
Table: GSEA Results Summary



Fig 1: Enrichment plot: BMI1_DN_MEL18_DN.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CHST11carbohydrate sulfotransferase 11 [Source:HGNC Symbol;Acc:HGNC:17422]104.9770.0278Yes
2LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]254.8830.0549Yes
3FOSL1FOS like 1, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:13718]344.8410.0819Yes
4IL1Ainterleukin 1 alpha [Source:HGNC Symbol;Acc:HGNC:5991]434.7840.1086Yes
5VEGFCvascular endothelial growth factor C [Source:HGNC Symbol;Acc:HGNC:12682]484.7190.1351Yes
6EDN1endothelin 1 [Source:HGNC Symbol;Acc:HGNC:3176]1274.2340.1568Yes
7C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]1314.2030.1804Yes
8GADD45Agrowth arrest and DNA damage inducible alpha [Source:HGNC Symbol;Acc:HGNC:4095]1414.1570.2036Yes
9PMEPA1prostate transmembrane protein, androgen induced 1 [Source:HGNC Symbol;Acc:HGNC:14107]1464.1460.2268Yes
10ABCA1ATP binding cassette subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:29]1484.1350.2501Yes
11ZC3H12Azinc finger CCCH-type containing 12A [Source:HGNC Symbol;Acc:HGNC:26259]1494.1300.2733Yes
12SLC7A11solute carrier family 7 member 11 [Source:HGNC Symbol;Acc:HGNC:11059]1744.0010.2952Yes
13ITGA5integrin subunit alpha 5 [Source:HGNC Symbol;Acc:HGNC:6141]2243.7900.3152Yes
14PIM1Pim-1 proto-oncogene, serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:8986]2683.6180.3344Yes
15TFECtranscription factor EC [Source:HGNC Symbol;Acc:HGNC:11754]3123.4880.3529Yes
16FAPfibroblast activation protein alpha [Source:HGNC Symbol;Acc:HGNC:3590]4752.9960.3654Yes
17EHD1EH domain containing 1 [Source:HGNC Symbol;Acc:HGNC:3242]5882.7420.3778Yes
18CSF1colony stimulating factor 1 [Source:HGNC Symbol;Acc:HGNC:2432]7222.5790.3887Yes
19PIEZO1piezo type mechanosensitive ion channel component 1 [Source:HGNC Symbol;Acc:HGNC:28993]8972.2900.3969Yes
20ATF3activating transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:785]9932.1640.4065Yes
21TNIP3TNFAIP3 interacting protein 3 [Source:HGNC Symbol;Acc:HGNC:19315]10532.0840.4166Yes
22MT1Fmetallothionein 1F [Source:HGNC Symbol;Acc:HGNC:7398]13211.8760.4200Yes
23ADGBandroglobin [Source:HGNC Symbol;Acc:HGNC:21212]13491.8740.4298Yes
24RUSC2RUN and SH3 domain containing 2 [Source:HGNC Symbol;Acc:HGNC:23625]14401.7530.4372Yes
25NRP2neuropilin 2 [Source:HGNC Symbol;Acc:HGNC:8005]14771.7220.4459Yes
26CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]17061.5530.4485Yes
27KCNN4potassium calcium-activated channel subfamily N member 4 [Source:HGNC Symbol;Acc:HGNC:6293]18941.4270.4515Yes
28SLC1A4solute carrier family 1 member 4 [Source:HGNC Symbol;Acc:HGNC:10942]19121.4090.4590Yes
29GFPT2glutamine-fructose-6-phosphate transaminase 2 [Source:HGNC Symbol;Acc:HGNC:4242]19781.3710.4649Yes
30INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]20481.3230.4705Yes
31SLC22A4solute carrier family 22 member 4 [Source:HGNC Symbol;Acc:HGNC:10968]21101.2920.4761Yes
32HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]21711.2530.4815Yes
33LCP1lymphocyte cytosolic protein 1 [Source:HGNC Symbol;Acc:HGNC:6528]23031.2220.4849Yes
34FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]23981.1690.4889Yes
35TGFB2transforming growth factor beta 2 [Source:HGNC Symbol;Acc:HGNC:11768]27221.0410.4860Yes
36TRIB3tribbles pseudokinase 3 [Source:HGNC Symbol;Acc:HGNC:16228]27301.0370.4917Yes
37GAB2GRB2 associated binding protein 2 [Source:HGNC Symbol;Acc:HGNC:14458]27711.0200.4963Yes
38SLC7A5solute carrier family 7 member 5 [Source:HGNC Symbol;Acc:HGNC:11063]28300.9930.5004Yes
39RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]31380.8660.4969Yes
40APBB2amyloid beta precursor protein binding family B member 2 [Source:HGNC Symbol;Acc:HGNC:582]32890.8040.4974Yes
41KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]34310.7620.4979Yes
42ZEB2zinc finger E-box binding homeobox 2 [Source:HGNC Symbol;Acc:HGNC:14881]34500.7560.5016Yes
43DUSP10dual specificity phosphatase 10 [Source:HGNC Symbol;Acc:HGNC:3065]41610.5300.4854No
44KCNN3potassium calcium-activated channel subfamily N member 3 [Source:HGNC Symbol;Acc:HGNC:6292]41720.5270.4881No
45MICALL1MICAL like 1 [Source:HGNC Symbol;Acc:HGNC:29804]43770.4700.4852No
46CDC42EP2CDC42 effector protein 2 [Source:HGNC Symbol;Acc:HGNC:16263]47150.3700.4782No
47TNFRSF8TNF receptor superfamily member 8 [Source:HGNC Symbol;Acc:HGNC:11923]47250.3670.4800No
48ARL4AADP ribosylation factor like GTPase 4A [Source:HGNC Symbol;Acc:HGNC:695]48030.3430.4799No
49SLC19A1solute carrier family 19 member 1 [Source:HGNC Symbol;Acc:HGNC:10937]51560.2400.4717No
50STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]55910.2280.4612No
51BST1bone marrow stromal cell antigen 1 [Source:HGNC Symbol;Acc:HGNC:1118]59600.1110.4519No
52CSPG4chondroitin sulfate proteoglycan 4 [Source:HGNC Symbol;Acc:HGNC:2466]59870.1040.4518No
53COL7A1collagen type VII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2214]60580.0810.4503No
54PIK3CGphosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma [Source:HGNC Symbol;Acc:HGNC:8978]62410.0300.4456No
55ANXA3annexin A3 [Source:HGNC Symbol;Acc:HGNC:541]62940.0140.4443No
56FGF21fibroblast growth factor 21 [Source:HGNC Symbol;Acc:HGNC:3678]69540.0000.4264No
57ABLIM3actin binding LIM protein family member 3 [Source:HGNC Symbol;Acc:HGNC:29132]71090.0000.4222No
58GREM1gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001]83330.0000.3891No
59TNFSF9TNF superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11939]89700.0000.3719No
60MAP3K7CLMAP3K7 C-terminal like [Source:HGNC Symbol;Acc:HGNC:16457]93300.0000.3622No
61VLDLRvery low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:12698]95730.0000.3557No
62TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]98420.0000.3484No
63PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]99650.0000.3451No
64ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]99770.0000.3448No
65ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]99790.0000.3448No
66ADM2adrenomedullin 2 [Source:HGNC Symbol;Acc:HGNC:28898]112320.0000.3109No
67LRRC15leucine rich repeat containing 15 [Source:HGNC Symbol;Acc:HGNC:20818]115100.0000.3034No
68PTHLHparathyroid hormone like hormone [Source:HGNC Symbol;Acc:HGNC:9607]117580.0000.2967No
69TEKTEK receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:11724]125960.0000.2741No
70VNN1vanin 1 [Source:HGNC Symbol;Acc:HGNC:12705]127550.0000.2698No
71TACR3tachykinin receptor 3 [Source:HGNC Symbol;Acc:HGNC:11528]132350.0000.2568No
72GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]134520.0000.2510No
73PODXLpodocalyxin like [Source:HGNC Symbol;Acc:HGNC:9171]135160.0000.2493No
74TAGLNtransgelin [Source:HGNC Symbol;Acc:HGNC:11553]138550.0000.2401No
75IL7Rinterleukin 7 receptor [Source:HGNC Symbol;Acc:HGNC:6024]139570.0000.2374No
76P2RX5purinergic receptor P2X 5 [Source:HGNC Symbol;Acc:HGNC:8536]141980.0000.2309No
77COL13A1collagen type XIII alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2190]155130.0000.1953No
78HTR1D5-hydroxytryptamine receptor 1D [Source:HGNC Symbol;Acc:HGNC:5289]155730.0000.1937No
79COL16A1collagen type XVI alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2193]164960.0000.1688No
80GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]169330.0000.1570No
81TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171760.0000.1504No
82MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]171880.0000.1501No
83FAM189A1family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075]173660.0000.1453No
84HAPLN1hyaluronan and proteoglycan link protein 1 [Source:HGNC Symbol;Acc:HGNC:2380]174620.0000.1428No
85MICAMHC class I polypeptide-related sequence A [Source:HGNC Symbol;Acc:HGNC:7090]177310.0000.1355No
86PAPPApappalysin 1 [Source:HGNC Symbol;Acc:HGNC:8602]179390.0000.1299No
87CDH13cadherin 13 [Source:HGNC Symbol;Acc:HGNC:1753]188000.0000.1066No
88BMP5bone morphogenetic protein 5 [Source:HGNC Symbol;Acc:HGNC:1072]191670.0000.0967No
89MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191960.0000.0960No
90CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]195530.0000.0863No
91CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]195620.0000.0861No
92ARNTL2aryl hydrocarbon receptor nuclear translocator like 2 [Source:HGNC Symbol;Acc:HGNC:18984]198870.0000.0774No
93CPA4carboxypeptidase A4 [Source:HGNC Symbol;Acc:HGNC:15740]206430.0000.0569No
94NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]208210.0000.0521No
95LAMB3laminin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6490]208860.0000.0504No
96CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]216970.0000.0285No
97LSAMPlimbic system associated membrane protein [Source:HGNC Symbol;Acc:HGNC:6705]219220.0000.0224No
98WNT5BWnt family member 5B [Source:HGNC Symbol;Acc:HGNC:16265]219450.0000.0218No
99CLDN1claudin 1 [Source:HGNC Symbol;Acc:HGNC:2032]220530.0000.0189No
100HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]221230.0000.0170No
101PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]229320.000-0.0048No
102PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]230360.000-0.0076No
103ITGB8integrin subunit beta 8 [Source:HGNC Symbol;Acc:HGNC:6163]238280.000-0.0290No
104ITGB6integrin subunit beta 6 [Source:HGNC Symbol;Acc:HGNC:6161]238310.000-0.0291No
105ITGA3integrin subunit alpha 3 [Source:HGNC Symbol;Acc:HGNC:6139]238340.000-0.0291No
106PAGE1PAGE family member 1 [Source:HGNC Symbol;Acc:HGNC:4107]239260.000-0.0316No
107SCML2Scm polycomb group protein like 2 [Source:HGNC Symbol;Acc:HGNC:10581]250800.000-0.0628No
108TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]258390.000-0.0833No
109KRT75keratin 75 [Source:HGNC Symbol;Acc:HGNC:24431]270540.000-0.1162No
110VEGFAvascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680]29178-0.170-0.1727No
111ADGRE5adhesion G protein-coupled receptor E5 [Source:HGNC Symbol;Acc:HGNC:1711]29694-0.288-0.1850No
112ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]29872-0.325-0.1880No
113ASPHaspartate beta-hydroxylase [Source:HGNC Symbol;Acc:HGNC:757]29985-0.351-0.1890No
114TCIMtranscriptional and immune response regulator [Source:HGNC Symbol;Acc:HGNC:1357]30293-0.431-0.1949No
115BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]30579-0.507-0.1998No
116PSAT1phosphoserine aminotransferase 1 [Source:HGNC Symbol;Acc:HGNC:19129]31099-0.645-0.2102No
117TUFT1tuftelin 1 [Source:HGNC Symbol;Acc:HGNC:12422]31239-0.685-0.2101No
118KMT2Alysine methyltransferase 2A [Source:HGNC Symbol;Acc:HGNC:7132]31930-0.890-0.2237No
119SLC6A9solute carrier family 6 member 9 [Source:HGNC Symbol;Acc:HGNC:11056]32011-0.915-0.2208No
120STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]32549-1.100-0.2291No
121INHBEinhibin subunit beta E [Source:HGNC Symbol;Acc:HGNC:24029]32758-1.167-0.2282No
122F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]32848-1.199-0.2238No
123NKAIN1sodium/potassium transporting ATPase interacting 1 [Source:HGNC Symbol;Acc:HGNC:25743]33004-1.259-0.2209No
124TRIOtrio Rho guanine nucleotide exchange factor [Source:HGNC Symbol;Acc:HGNC:12303]33097-1.292-0.2161No
125SIK1salt inducible kinase 1 [Source:HGNC Symbol;Acc:HGNC:11142]33359-1.402-0.2153No
126KIF21Bkinesin family member 21B [Source:HGNC Symbol;Acc:HGNC:29442]34088-1.661-0.2257No
127CCND1cyclin D1 [Source:HGNC Symbol;Acc:HGNC:1582]34096-1.664-0.2165No
128C2CD2LC2CD2 like [Source:HGNC Symbol;Acc:HGNC:29000]34596-1.920-0.2192No
129JAG1jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188]34686-1.954-0.2106No
130NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]35161-2.294-0.2105No
131ARL4CADP ribosylation factor like GTPase 4C [Source:HGNC Symbol;Acc:HGNC:698]35672-2.613-0.2096No
132PLEKHO1pleckstrin homology domain containing O1 [Source:HGNC Symbol;Acc:HGNC:24310]35682-2.618-0.1951No
133WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]35705-2.646-0.1808No
134LHFPL2LHFPL tetraspan subfamily member 2 [Source:HGNC Symbol;Acc:HGNC:6588]35729-2.660-0.1664No
135C2CD2C2 calcium dependent domain containing 2 [Source:HGNC Symbol;Acc:HGNC:1266]35876-2.818-0.1545No
136FADS3fatty acid desaturase 3 [Source:HGNC Symbol;Acc:HGNC:3576]35878-2.821-0.1387No
137ATP13A2ATPase cation transporting 13A2 [Source:HGNC Symbol;Acc:HGNC:30213]36364-3.337-0.1330No
138CHST3carbohydrate sulfotransferase 3 [Source:HGNC Symbol;Acc:HGNC:1971]36369-3.351-0.1142No
139NAV2neuron navigator 2 [Source:HGNC Symbol;Acc:HGNC:15997]36473-3.451-0.0976No
140ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]36578-3.612-0.0801No
141OGFRL1opioid growth factor receptor like 1 [Source:HGNC Symbol;Acc:HGNC:21378]36581-3.614-0.0598No
142ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]36900-4.231-0.0446No
143ADRB2adrenoceptor beta 2 [Source:HGNC Symbol;Acc:HGNC:286]36916-4.275-0.0209No
144TMEM51transmembrane protein 51 [Source:HGNC Symbol;Acc:HGNC:25488]36999-4.5420.0025No
Table: GSEA details [plain text format]



Fig 2: BMI1_DN_MEL18_DN.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BMI1_DN_MEL18_DN.V1_UP: Random ES distribution   
Gene set null distribution of ES for BMI1_DN_MEL18_DN.V1_UP