Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCSR_EARLY_UP.V1_DN
Enrichment Score (ES)-0.6060415
Normalized Enrichment Score (NES)-1.3125689
Nominal p-value0.03504673
FDR q-value0.18665281
FWER p-Value0.975
Table: GSEA Results Summary



Fig 1: Enrichment plot: CSR_EARLY_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IFIT2interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409]1154.2960.0261No
2NR1H3nuclear receptor subfamily 1 group H member 3 [Source:HGNC Symbol;Acc:HGNC:7966]2893.5470.0456No
3EIF4EBP3eukaryotic translation initiation factor 4E binding protein 3 [Source:HGNC Symbol;Acc:HGNC:3290]5432.8440.0581No
4MINDY1MINDY lysine 48 deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:25648]9392.2290.0625No
5STAT2signal transducer and activator of transcription 2 [Source:HGNC Symbol;Acc:HGNC:11363]10472.0890.0739No
6LRIG2leucine rich repeats and immunoglobulin like domains 2 [Source:HGNC Symbol;Acc:HGNC:20889]10482.0870.0881No
7TENT5Cterminal nucleotidyltransferase 5C [Source:HGNC Symbol;Acc:HGNC:24712]12221.8760.0961No
8ARL4DADP ribosylation factor like GTPase 4D [Source:HGNC Symbol;Acc:HGNC:656]12351.8760.1086No
9TRIM56tripartite motif containing 56 [Source:HGNC Symbol;Acc:HGNC:19028]15851.6410.1103No
10IP6K2inositol hexakisphosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:17313]19201.4010.1108No
11ZNF585Bzinc finger protein 585B [Source:HGNC Symbol;Acc:HGNC:30948]22191.2270.1111No
12GRHL1grainyhead like transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:17923]30810.8870.0938No
13DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]31400.8650.0981No
14ZFYVE1zinc finger FYVE-type containing 1 [Source:HGNC Symbol;Acc:HGNC:13180]36180.6990.0900No
15LTN1listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]37400.6600.0912No
16DENND11DENN domain containing 11 [Source:HGNC Symbol;Acc:HGNC:29472]39550.5900.0894No
17FBXO38F-box protein 38 [Source:HGNC Symbol;Acc:HGNC:28844]39890.5830.0925No
18APBB3amyloid beta precursor protein binding family B member 3 [Source:HGNC Symbol;Acc:HGNC:20708]42770.4960.0881No
19RNF20ring finger protein 20 [Source:HGNC Symbol;Acc:HGNC:10062]43070.4870.0906No
20HEBP2heme binding protein 2 [Source:HGNC Symbol;Acc:HGNC:15716]52010.2390.0681No
21ZNF500zinc finger protein 500 [Source:HGNC Symbol;Acc:HGNC:23716]54010.2390.0643No
22GTPBP8GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]59370.1200.0507No
23RAPGEF3Rap guanine nucleotide exchange factor 3 [Source:HGNC Symbol;Acc:HGNC:16629]67110.0000.0298No
24DAAM2dishevelled associated activator of morphogenesis 2 [Source:HGNC Symbol;Acc:HGNC:18143]69920.0000.0222No
25ASPAaspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]78610.000-0.0013No
26PMS2P1PMS1 homolog 2, mismatch repair system component pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:9123]80060.000-0.0052No
27PRRT2proline rich transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:30500]86070.000-0.0214No
28TDRD6tudor domain containing 6 [Source:HGNC Symbol;Acc:HGNC:21339]92280.000-0.0382No
29HSPG2heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:HGNC:5273]103810.000-0.0694No
30GFRA1GDNF family receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4243]113330.000-0.0951No
31ERAP2endoplasmic reticulum aminopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:29499]115970.000-0.1022No
32COL1A1collagen type I alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2197]129080.000-0.1376No
33GSDMBgasdermin B [Source:HGNC Symbol;Acc:HGNC:23690]132200.000-0.1460No
34CDRT4CMT1A duplicated region transcript 4 [Source:HGNC Symbol;Acc:HGNC:14383]133890.000-0.1506No
35GDF5growth differentiation factor 5 [Source:HGNC Symbol;Acc:HGNC:4220]134520.000-0.1523No
36PDE5Aphosphodiesterase 5A [Source:HGNC Symbol;Acc:HGNC:8784]135460.000-0.1548No
37NYNRINNYN domain and retroviral integrase containing [Source:HGNC Symbol;Acc:HGNC:20165]140120.000-0.1674No
38HOXA10homeobox A10 [Source:HGNC Symbol;Acc:HGNC:5100]143750.000-0.1772No
39STOX1storkhead box 1 [Source:HGNC Symbol;Acc:HGNC:23508]158660.000-0.2175No
40MAB21L1mab-21 like 1 [Source:HGNC Symbol;Acc:HGNC:6757]158740.000-0.2177No
41SLC7A14solute carrier family 7 member 14 [Source:HGNC Symbol;Acc:HGNC:29326]162760.000-0.2285No
42SLC9A7solute carrier family 9 member A7 [Source:HGNC Symbol;Acc:HGNC:17123]176060.000-0.2645No
43PAPLNpapilin, proteoglycan like sulfated glycoprotein [Source:HGNC Symbol;Acc:HGNC:19262]179650.000-0.2741No
44C14orf132chromosome 14 open reading frame 132 [Source:HGNC Symbol;Acc:HGNC:20346]179850.000-0.2747No
45IGLL1immunoglobulin lambda like polypeptide 1 [Source:HGNC Symbol;Acc:HGNC:5870]185110.000-0.2889No
46CAVIN2caveolae associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10690]208050.000-0.3509No
47ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]230420.000-0.4114No
48SNPHsyntaphilin [Source:HGNC Symbol;Acc:HGNC:15931]232140.000-0.4160No
49NSUN5P2NSUN5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:16609]234150.000-0.4214No
50PLCD1phospholipase C delta 1 [Source:HGNC Symbol;Acc:HGNC:9060]234660.000-0.4228No
51XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]247140.000-0.4565No
52SAGS-antigen visual arrestin [Source:HGNC Symbol;Acc:HGNC:10521]256070.000-0.4806No
53SULF1sulfatase 1 [Source:HGNC Symbol;Acc:HGNC:20391]268190.000-0.5134No
54ZNF33Azinc finger protein 33A [Source:HGNC Symbol;Acc:HGNC:13096]275630.000-0.5335No
55ZNF337zinc finger protein 337 [Source:HGNC Symbol;Acc:HGNC:15809]275690.000-0.5336No
56ZNF302zinc finger protein 302 [Source:HGNC Symbol;Acc:HGNC:13848]276160.000-0.5349No
57CYP2R1cytochrome P450 family 2 subfamily R member 1 [Source:HGNC Symbol;Acc:HGNC:20580]278240.000-0.5405No
58CC2D1Acoiled-coil and C2 domain containing 1A [Source:HGNC Symbol;Acc:HGNC:30237]28527-0.003-0.5594No
59ZFP64ZFP64 zinc finger protein [Source:HGNC Symbol;Acc:HGNC:15940]28552-0.009-0.5600No
60FBXO25F-box protein 25 [Source:HGNC Symbol;Acc:HGNC:13596]28555-0.009-0.5600No
61RABGAP1RAB GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:17155]28588-0.018-0.5608No
62SLC25A46solute carrier family 25 member 46 [Source:HGNC Symbol;Acc:HGNC:25198]28839-0.080-0.5670No
63KBTBD6kelch repeat and BTB domain containing 6 [Source:HGNC Symbol;Acc:HGNC:25340]28983-0.119-0.5701No
64TAF15TATA-box binding protein associated factor 15 [Source:HGNC Symbol;Acc:HGNC:11547]29267-0.190-0.5764No
65TFAP2Atranscription factor AP-2 alpha [Source:HGNC Symbol;Acc:HGNC:11742]29487-0.238-0.5807No
66NDNFneuron derived neurotrophic factor [Source:HGNC Symbol;Acc:HGNC:26256]29640-0.274-0.5830No
67DXOdecapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]30042-0.364-0.5913No
68PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]30314-0.436-0.5957No
69ELMOD2ELMO domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28111]30370-0.453-0.5941No
70USP33ubiquitin specific peptidase 33 [Source:HGNC Symbol;Acc:HGNC:20059]30372-0.454-0.5910No
71PHIPpleckstrin homology domain interacting protein [Source:HGNC Symbol;Acc:HGNC:15673]30638-0.523-0.5947No
72MSRB1methionine sulfoxide reductase B1 [Source:HGNC Symbol;Acc:HGNC:14133]30758-0.556-0.5941No
73ALDH1L2aldehyde dehydrogenase 1 family member L2 [Source:HGNC Symbol;Acc:HGNC:26777]30930-0.597-0.5947No
74ALDH3B2aldehyde dehydrogenase 3 family member B2 [Source:HGNC Symbol;Acc:HGNC:411]30937-0.599-0.5908No
75SKP2S-phase kinase associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10901]31105-0.646-0.5909No
76CROCCP2CROCC pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:28170]31598-0.769-0.5990Yes
77STX16syntaxin 16 [Source:HGNC Symbol;Acc:HGNC:11431]31615-0.774-0.5941Yes
78ACBD4acyl-CoA binding domain containing 4 [Source:HGNC Symbol;Acc:HGNC:23337]31882-0.868-0.5954Yes
79ADAMTSL4ADAMTS like 4 [Source:HGNC Symbol;Acc:HGNC:19706]32079-0.936-0.5944Yes
80BRD8bromodomain containing 8 [Source:HGNC Symbol;Acc:HGNC:19874]32512-1.089-0.5986Yes
81ELMOD3ELMO domain containing 3 [Source:HGNC Symbol;Acc:HGNC:26158]32534-1.095-0.5918Yes
82STC2stanniocalcin 2 [Source:HGNC Symbol;Acc:HGNC:11374]32549-1.100-0.5846Yes
83ABCC10ATP binding cassette subfamily C member 10 [Source:HGNC Symbol;Acc:HGNC:52]32634-1.129-0.5792Yes
84LDB1LIM domain binding 1 [Source:HGNC Symbol;Acc:HGNC:6532]32902-1.222-0.5782Yes
85NDUFAF7NADH:ubiquinone oxidoreductase complex assembly factor 7 [Source:HGNC Symbol;Acc:HGNC:28816]32910-1.225-0.5700Yes
86MOSPD2motile sperm domain containing 2 [Source:HGNC Symbol;Acc:HGNC:28381]33050-1.275-0.5651Yes
87TCAIMT cell activation inhibitor, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25241]33098-1.292-0.5576Yes
88AKIP1A-kinase interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:1170]33278-1.367-0.5531Yes
89DDX17DEAD-box helicase 17 [Source:HGNC Symbol;Acc:HGNC:2740]33329-1.385-0.5451Yes
90UBN2ubinuclein 2 [Source:HGNC Symbol;Acc:HGNC:21931]33347-1.396-0.5360Yes
91PAN2poly(A) specific ribonuclease subunit PAN2 [Source:HGNC Symbol;Acc:HGNC:20074]33865-1.543-0.5395Yes
92NMT2N-myristoyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:7858]33938-1.581-0.5307Yes
93ZNF467zinc finger protein 467 [Source:HGNC Symbol;Acc:HGNC:23154]33944-1.584-0.5201Yes
94C2CD5C2 calcium dependent domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29062]33948-1.585-0.5093Yes
95ANKZF1ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 [Source:HGNC Symbol;Acc:HGNC:25527]33957-1.589-0.4988Yes
96POLLDNA polymerase lambda [Source:HGNC Symbol;Acc:HGNC:9184]34045-1.641-0.4899Yes
97UFSP2UFM1 specific peptidase 2 [Source:HGNC Symbol;Acc:HGNC:25640]34118-1.671-0.4805Yes
98LRRK2leucine rich repeat kinase 2 [Source:HGNC Symbol;Acc:HGNC:18618]34233-1.734-0.4718Yes
99LRIG3leucine rich repeats and immunoglobulin like domains 3 [Source:HGNC Symbol;Acc:HGNC:30991]34256-1.746-0.4605Yes
100SIX5SIX homeobox 5 [Source:HGNC Symbol;Acc:HGNC:10891]34467-1.841-0.4537Yes
101SIX1SIX homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10887]35057-2.214-0.4546Yes
102CDKN1Bcyclin dependent kinase inhibitor 1B [Source:HGNC Symbol;Acc:HGNC:1785]35125-2.268-0.4410Yes
103CKBcreatine kinase B [Source:HGNC Symbol;Acc:HGNC:1991]35129-2.270-0.4256Yes
104ING4inhibitor of growth family member 4 [Source:HGNC Symbol;Acc:HGNC:19423]35144-2.278-0.4105Yes
105HBP1HMG-box transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:23200]35149-2.282-0.3951Yes
106MRI1methylthioribose-1-phosphate isomerase 1 [Source:HGNC Symbol;Acc:HGNC:28469]35206-2.315-0.3808Yes
107ACYP1acylphosphatase 1 [Source:HGNC Symbol;Acc:HGNC:179]35226-2.316-0.3656Yes
108TXNIPthioredoxin interacting protein [Source:HGNC Symbol;Acc:HGNC:16952]35449-2.436-0.3550Yes
109CIRBPcold inducible RNA binding protein [Source:HGNC Symbol;Acc:HGNC:1982]35564-2.528-0.3409Yes
110ATF7IPactivating transcription factor 7 interacting protein [Source:HGNC Symbol;Acc:HGNC:20092]35588-2.554-0.3241Yes
111ACCS1-aminocyclopropane-1-carboxylate synthase homolog (inactive) [Source:HGNC Symbol;Acc:HGNC:23989]35673-2.614-0.3086Yes
112WEE1WEE1 G2 checkpoint kinase [Source:HGNC Symbol;Acc:HGNC:12761]35705-2.646-0.2915Yes
113ZNF226zinc finger protein 226 [Source:HGNC Symbol;Acc:HGNC:13019]35764-2.692-0.2747Yes
114BBC3BCL2 binding component 3 [Source:HGNC Symbol;Acc:HGNC:17868]35808-2.743-0.2572Yes
115DCP1Bdecapping mRNA 1B [Source:HGNC Symbol;Acc:HGNC:24451]35863-2.794-0.2397Yes
116YEATS2YEATS domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25489]35943-2.857-0.2224Yes
117MPPE1metallophosphoesterase 1 [Source:HGNC Symbol;Acc:HGNC:15988]36033-2.964-0.2046Yes
118FUT10fucosyltransferase 10 [Source:HGNC Symbol;Acc:HGNC:19234]36060-2.988-0.1850Yes
119ARRDC3arrestin domain containing 3 [Source:HGNC Symbol;Acc:HGNC:29263]36557-3.585-0.1740Yes
120ADMadrenomedullin [Source:HGNC Symbol;Acc:HGNC:259]36578-3.612-0.1500Yes
121SLC16A7solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]36649-3.721-0.1266Yes
122NATD1N-acetyltransferase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30770]36690-3.791-0.1019Yes
123AMTaminomethyltransferase [Source:HGNC Symbol;Acc:HGNC:473]36778-3.960-0.0773Yes
124NPHP3nephrocystin 3 [Source:HGNC Symbol;Acc:HGNC:7907]36796-4.000-0.0506Yes
125OTUD1OTU deubiquitinase 1 [Source:HGNC Symbol;Acc:HGNC:27346]36841-4.091-0.0239Yes
126FZD2frizzled class receptor 2 [Source:HGNC Symbol;Acc:HGNC:4040]36991-4.5020.0027Yes
Table: GSEA details [plain text format]



Fig 2: CSR_EARLY_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CSR_EARLY_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for CSR_EARLY_UP.V1_DN