Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetCSR_EARLY_UP.V1_UP
Enrichment Score (ES)0.46705183
Normalized Enrichment Score (NES)1.2180974
Nominal p-value0.03508772
FDR q-value0.18929204
FWER p-Value0.681
Table: GSEA Results Summary



Fig 1: Enrichment plot: CSR_EARLY_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]184.9240.0277Yes
2ID3inhibitor of DNA binding 3, HLH protein [Source:HGNC Symbol;Acc:HGNC:5362]1194.2610.0494Yes
3PTPN12protein tyrosine phosphatase non-receptor type 12 [Source:HGNC Symbol;Acc:HGNC:9645]3583.3220.0620Yes
4SMAD7SMAD family member 7 [Source:HGNC Symbol;Acc:HGNC:6773]4023.1970.0791Yes
5ITPRIPL2ITPRIP like 2 [Source:HGNC Symbol;Acc:HGNC:27257]4083.1720.0971Yes
6PNPpurine nucleoside phosphorylase [Source:HGNC Symbol;Acc:HGNC:7892]5952.7080.1076Yes
7C21orf91chromosome 21 open reading frame 91 [Source:HGNC Symbol;Acc:HGNC:16459]6112.6800.1225Yes
8MAP2K3mitogen-activated protein kinase kinase 3 [Source:HGNC Symbol;Acc:HGNC:6843]7462.5320.1334Yes
9YWHAGtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma [Source:HGNC Symbol;Acc:HGNC:12852]7992.4240.1459Yes
10PXNpaxillin [Source:HGNC Symbol;Acc:HGNC:9718]8442.3510.1581Yes
11TLNRD1talin rod domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13519]9162.2640.1692Yes
12KPNA4karyopherin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6397]9492.2140.1810Yes
13BCAR3BCAR3 adaptor protein, NSP family member [Source:HGNC Symbol;Acc:HGNC:973]9532.2120.1936Yes
14ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]9582.2030.2061Yes
15RIPK2receptor interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:10020]10782.0540.2146Yes
16RRP9ribosomal RNA processing 9, U3 small nucleolar RNA binding protein [Source:HGNC Symbol;Acc:HGNC:16829]13671.8500.2174Yes
17NIP7nucleolar pre-rRNA processing protein NIP7 [Source:HGNC Symbol;Acc:HGNC:24328]14651.7340.2247Yes
18USP12ubiquitin specific peptidase 12 [Source:HGNC Symbol;Acc:HGNC:20485]15311.6850.2326Yes
19ADRM1adhesion regulating molecule 1 [Source:HGNC Symbol;Acc:HGNC:15759]15431.6680.2418Yes
20ACTR3actin related protein 3 [Source:HGNC Symbol;Acc:HGNC:170]15571.6630.2510Yes
21NIFKnucleolar protein interacting with the FHA domain of MKI67 [Source:HGNC Symbol;Acc:HGNC:17838]15891.6360.2595Yes
22PUM3pumilio RNA binding family member 3 [Source:HGNC Symbol;Acc:HGNC:29676]16741.5760.2663Yes
23CRISPLD2cysteine rich secretory protein LCCL domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25248]17061.5530.2743Yes
24NOP16NOP16 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:26934]17131.5470.2830Yes
25CCDC59coiled-coil domain containing 59 [Source:HGNC Symbol;Acc:HGNC:25005]17301.5350.2914Yes
26ELOAelongin A [Source:HGNC Symbol;Acc:HGNC:11620]17431.5250.2998Yes
27GTPBP4GTP binding protein 4 [Source:HGNC Symbol;Acc:HGNC:21535]18841.4360.3042Yes
28EMC6ER membrane protein complex subunit 6 [Source:HGNC Symbol;Acc:HGNC:28430]19341.3910.3108Yes
29TDGthymine DNA glycosylase [Source:HGNC Symbol;Acc:HGNC:11700]19571.3790.3181Yes
30PHLPP2PH domain and leucine rich repeat protein phosphatase 2 [Source:HGNC Symbol;Acc:HGNC:29149]20181.3440.3242Yes
31INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]20481.3230.3310Yes
32AMMECR1LAMMECR1 like [Source:HGNC Symbol;Acc:HGNC:28658]21371.2720.3359Yes
33FRMD6FERM domain containing 6 [Source:HGNC Symbol;Acc:HGNC:19839]21671.2540.3423Yes
34HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]21711.2530.3494Yes
35SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]21741.2510.3565Yes
36LRRC8Aleucine rich repeat containing 8 VRAC subunit A [Source:HGNC Symbol;Acc:HGNC:19027]22121.2300.3625Yes
37TOP1DNA topoisomerase I [Source:HGNC Symbol;Acc:HGNC:11986]23161.2150.3667Yes
38TENT4Aterminal nucleotidyltransferase 4A [Source:HGNC Symbol;Acc:HGNC:16705]23171.2140.3736Yes
39ELLelongation factor for RNA polymerase II [Source:HGNC Symbol;Acc:HGNC:23114]23791.1770.3787Yes
40DNAJA1DnaJ heat shock protein family (Hsp40) member A1 [Source:HGNC Symbol;Acc:HGNC:5229]23891.1730.3852Yes
41FJX1four-jointed box kinase 1 [Source:HGNC Symbol;Acc:HGNC:17166]23981.1690.3917Yes
42DKC1dyskerin pseudouridine synthase 1 [Source:HGNC Symbol;Acc:HGNC:2890]24881.1340.3957Yes
43SLC30A1solute carrier family 30 member 1 [Source:HGNC Symbol;Acc:HGNC:11012]25731.0980.3998Yes
44ZNF800zinc finger protein 800 [Source:HGNC Symbol;Acc:HGNC:27267]26831.0540.4028Yes
45TRMT10CtRNA methyltransferase 10C, mitochondrial RNase P subunit [Source:HGNC Symbol;Acc:HGNC:26022]27251.0400.4077Yes
46DHX33DEAH-box helicase 33 [Source:HGNC Symbol;Acc:HGNC:16718]28990.9580.4085Yes
47USP36ubiquitin specific peptidase 36 [Source:HGNC Symbol;Acc:HGNC:20062]30190.9170.4105Yes
48PTPN1protein tyrosine phosphatase non-receptor type 1 [Source:HGNC Symbol;Acc:HGNC:9642]30470.9070.4150Yes
49ST3GAL1ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:10862]31500.8610.4171Yes
50BRPF1bromodomain and PHD finger containing 1 [Source:HGNC Symbol;Acc:HGNC:14255]31840.8480.4211Yes
51UBE2Nubiquitin conjugating enzyme E2 N [Source:HGNC Symbol;Acc:HGNC:12492]32360.8300.4245Yes
52BDKRB1bradykinin receptor B1 [Source:HGNC Symbol;Acc:HGNC:1029]32710.8150.4282Yes
53MSANTD3Myb/SANT DNA binding domain containing 3 [Source:HGNC Symbol;Acc:HGNC:23370]34660.7490.4273Yes
54TIMM23translocase of inner mitochondrial membrane 23 [Source:HGNC Symbol;Acc:HGNC:17312]35380.7220.4295Yes
55C8orf76chromosome 8 open reading frame 76 [Source:HGNC Symbol;Acc:HGNC:25924]35560.7150.4331Yes
56ILF2interleukin enhancer binding factor 2 [Source:HGNC Symbol;Acc:HGNC:6037]35760.7100.4367Yes
57MAPRE1microtubule associated protein RP/EB family member 1 [Source:HGNC Symbol;Acc:HGNC:6890]35960.7050.4402Yes
58PPIFpeptidylprolyl isomerase F [Source:HGNC Symbol;Acc:HGNC:9259]37080.6720.4410Yes
59MOB1BMOB kinase activator 1B [Source:HGNC Symbol;Acc:HGNC:29801]37530.6570.4436Yes
60DNTTIP2deoxynucleotidyltransferase terminal interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:24013]38420.6240.4448Yes
61CBFBcore-binding factor subunit beta [Source:HGNC Symbol;Acc:HGNC:1539]38780.6130.4473Yes
62SEC24ASEC24 homolog A, COPII coat complex component [Source:HGNC Symbol;Acc:HGNC:10703]38870.6110.4506Yes
63ELOCelongin C [Source:HGNC Symbol;Acc:HGNC:11617]40440.5680.4496Yes
64DOT1LDOT1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:24948]40610.5630.4524Yes
65DDX21DExD-box helicase 21 [Source:HGNC Symbol;Acc:HGNC:2744]40640.5620.4556Yes
66RNPS1RNA binding protein with serine rich domain 1 [Source:HGNC Symbol;Acc:HGNC:10080]41760.5260.4556Yes
67DIS3DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease [Source:HGNC Symbol;Acc:HGNC:20604]42200.5130.4574Yes
68RFKriboflavin kinase [Source:HGNC Symbol;Acc:HGNC:30324]42260.5110.4602Yes
69NMD3NMD3 ribosome export adaptor [Source:HGNC Symbol;Acc:HGNC:24250]43390.4780.4599Yes
70PCSK7proprotein convertase subtilisin/kexin type 7 [Source:HGNC Symbol;Acc:HGNC:8748]43820.4690.4614Yes
71CEMIP2cell migration inducing hyaluronidase 2 [Source:HGNC Symbol;Acc:HGNC:11869]45080.4280.4605Yes
72TNFRSF12ATNF receptor superfamily member 12A [Source:HGNC Symbol;Acc:HGNC:18152]45220.4250.4626Yes
73NCLnucleolin [Source:HGNC Symbol;Acc:HGNC:7667]46010.4050.4628Yes
74SLC28A1solute carrier family 28 member 1 [Source:HGNC Symbol;Acc:HGNC:11001]46090.4040.4649Yes
75NUP54nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]47080.3720.4644Yes
76EIF4A1eukaryotic translation initiation factor 4A1 [Source:HGNC Symbol;Acc:HGNC:3282]47560.3570.4651Yes
77PHF20L1PHD finger protein 20 like 1 [Source:HGNC Symbol;Acc:HGNC:24280]47710.3530.4668Yes
78AMD1adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:457]48330.3360.4671Yes
79HMGA1high mobility group AT-hook 1 [Source:HGNC Symbol;Acc:HGNC:5010]49780.2950.4648No
80CHUKcomponent of inhibitor of nuclear factor kappa B kinase complex [Source:HGNC Symbol;Acc:HGNC:1974]49950.2900.4661No
81ZPBPzona pellucida binding protein [Source:HGNC Symbol;Acc:HGNC:15662]52020.2390.4619No
82ATG101autophagy related 101 [Source:HGNC Symbol;Acc:HGNC:25679]57260.1830.4487No
83SPRY4sprouty RTK signaling antagonist 4 [Source:HGNC Symbol;Acc:HGNC:15533]57470.1740.4492No
84EIF4A3eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:HGNC:18683]58050.1590.4486No
85GNL2G protein nucleolar 2 [Source:HGNC Symbol;Acc:HGNC:29925]59470.1170.4454No
86TFGtrafficking from ER to golgi regulator [Source:HGNC Symbol;Acc:HGNC:11758]59900.1030.4449No
87VGLL4vestigial like family member 4 [Source:HGNC Symbol;Acc:HGNC:28966]60430.0850.4440No
88YOD1YOD1 deubiquitinase [Source:HGNC Symbol;Acc:HGNC:25035]62450.0290.4387No
89HPCAL1hippocalcin like 1 [Source:HGNC Symbol;Acc:HGNC:5145]62870.0180.4377No
90HECTD2HECT domain E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:26736]101960.0000.3319No
91B3GNT6UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:24141]108270.0000.3148No
92DCBLD1discoidin, CUB and LCCL domain containing 1 [Source:HGNC Symbol;Acc:HGNC:21479]122380.0000.2767No
93DDIT4LDNA damage inducible transcript 4 like [Source:HGNC Symbol;Acc:HGNC:30555]134480.0000.2439No
94GATA2GATA binding protein 2 [Source:HGNC Symbol;Acc:HGNC:4171]135790.0000.2404No
95IL11interleukin 11 [Source:HGNC Symbol;Acc:HGNC:5966]138330.0000.2336No
96TMEM200Atransmembrane protein 200A [Source:HGNC Symbol;Acc:HGNC:21075]163580.0000.1652No
97DLX2distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915]168080.0000.1531No
98GALgalanin and GMAP prepropeptide [Source:HGNC Symbol;Acc:HGNC:4114]169330.0000.1497No
99SNAI1snail family transcriptional repressor 1 [Source:HGNC Symbol;Acc:HGNC:11128]171650.0000.1435No
100TBX2T-box transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11597]198340.0000.0712No
101SCHIP1schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:15678]206850.0000.0482No
102FOXD1forkhead box D1 [Source:HGNC Symbol;Acc:HGNC:3802]207900.0000.0454No
103PLAURplasminogen activator, urokinase receptor [Source:HGNC Symbol;Acc:HGNC:9053]230360.000-0.0154No
104PLCH1phospholipase C eta 1 [Source:HGNC Symbol;Acc:HGNC:29185]234210.000-0.0258No
105SOX9SRY-box transcription factor 9 [Source:HGNC Symbol;Acc:HGNC:11204]235280.000-0.0286No
106ZNF697zinc finger protein 697 [Source:HGNC Symbol;Acc:HGNC:32034]263780.000-0.1058No
107CD33CD33 molecule [Source:HGNC Symbol;Acc:HGNC:1659]281450.000-0.1536No
108RGMBrepulsive guidance molecule BMP co-receptor b [Source:HGNC Symbol;Acc:HGNC:26896]28728-0.055-0.1690No
109TIMM22translocase of inner mitochondrial membrane 22 [Source:HGNC Symbol;Acc:HGNC:17317]28792-0.070-0.1703No
110SMARCA4SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]28840-0.080-0.1711No
111PTP4A1protein tyrosine phosphatase 4A1 [Source:HGNC Symbol;Acc:HGNC:9634]28913-0.100-0.1725No
112STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]29326-0.203-0.1825No
113MYO9Bmyosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]29327-0.204-0.1813No
114THAP12THAP domain containing 12 [Source:HGNC Symbol;Acc:HGNC:9440]29494-0.240-0.1845No
115SRP72signal recognition particle 72 [Source:HGNC Symbol;Acc:HGNC:11303]30250-0.418-0.2025No
116VTA1vesicle trafficking 1 [Source:HGNC Symbol;Acc:HGNC:20954]30321-0.438-0.2019No
117SLC16A1solute carrier family 16 member 1 [Source:HGNC Symbol;Acc:HGNC:10922]30395-0.461-0.2012No
118RESTRE1 silencing transcription factor [Source:HGNC Symbol;Acc:HGNC:9966]30483-0.479-0.2008No
119IRAK1interleukin 1 receptor associated kinase 1 [Source:HGNC Symbol;Acc:HGNC:6112]30556-0.499-0.1999No
120ZNF324zinc finger protein 324 [Source:HGNC Symbol;Acc:HGNC:14096]31121-0.649-0.2115No
121UTP3UTP3 small subunit processome component [Source:HGNC Symbol;Acc:HGNC:24477]31411-0.735-0.2151No
122NRIP1nuclear receptor interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:8001]32119-0.949-0.2288No
123SREK1IP1SREK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:26716]32207-0.990-0.2255No
124GABPB2GA binding protein transcription factor subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:28441]32289-1.021-0.2219No
125EHD4EH domain containing 4 [Source:HGNC Symbol;Acc:HGNC:3245]32359-1.030-0.2178No
126ELK3ETS transcription factor ELK3 [Source:HGNC Symbol;Acc:HGNC:3325]32409-1.046-0.2132No
127POLE3DNA polymerase epsilon 3, accessory subunit [Source:HGNC Symbol;Acc:HGNC:13546]32452-1.064-0.2082No
128CSRNP2cysteine and serine rich nuclear protein 2 [Source:HGNC Symbol;Acc:HGNC:16006]32617-1.124-0.2062No
129UAP1UDP-N-acetylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:HGNC:12457]32632-1.128-0.2001No
130KLF13Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672]32706-1.148-0.1955No
131TXNDC12thioredoxin domain containing 12 [Source:HGNC Symbol;Acc:HGNC:24626]32724-1.157-0.1894No
132CD274CD274 molecule [Source:HGNC Symbol;Acc:HGNC:17635]32832-1.192-0.1855No
133F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]32848-1.199-0.1790No
134PHLDB1pleckstrin homology like domain family B member 1 [Source:HGNC Symbol;Acc:HGNC:23697]32886-1.214-0.1731No
135CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]34397-1.805-0.2036No
136UGDHUDP-glucose 6-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:12525]34579-1.911-0.1976No
137ZBTB2zinc finger and BTB domain containing 2 [Source:HGNC Symbol;Acc:HGNC:20868]34652-1.944-0.1884No
138POM121POM121 transmembrane nucleoporin [Source:HGNC Symbol;Acc:HGNC:19702]34659-1.944-0.1774No
139NET1neuroepithelial cell transforming 1 [Source:HGNC Symbol;Acc:HGNC:14592]35048-2.209-0.1753No
140NT5E5'-nucleotidase ecto [Source:HGNC Symbol;Acc:HGNC:8021]35161-2.294-0.1652No
141DSPdesmoplakin [Source:HGNC Symbol;Acc:HGNC:3052]35210-2.316-0.1532No
142PANX1pannexin 1 [Source:HGNC Symbol;Acc:HGNC:8599]35427-2.414-0.1452No
143MRPS35mitochondrial ribosomal protein S35 [Source:HGNC Symbol;Acc:HGNC:16635]35690-2.623-0.1373No
144FAM107Bfamily with sequence similarity 107 member B [Source:HGNC Symbol;Acc:HGNC:23726]35877-2.818-0.1262No
145FZD8frizzled class receptor 8 [Source:HGNC Symbol;Acc:HGNC:4046]35893-2.842-0.1104No
146HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]35960-2.880-0.0957No
147SMTNsmoothelin [Source:HGNC Symbol;Acc:HGNC:11126]36424-3.426-0.0886No
148ZBTB12zinc finger and BTB domain containing 12 [Source:HGNC Symbol;Acc:HGNC:19066]36538-3.557-0.0713No
149BCAR1BCAR1 scaffold protein, Cas family member [Source:HGNC Symbol;Acc:HGNC:971]36583-3.619-0.0518No
150SLC37A4solute carrier family 37 member 4 [Source:HGNC Symbol;Acc:HGNC:4061]36584-3.620-0.0310No
151SHBSH2 domain containing adaptor protein B [Source:HGNC Symbol;Acc:HGNC:10838]36735-3.889-0.0128No
152KLF10Kruppel like factor 10 [Source:HGNC Symbol;Acc:HGNC:11810]36755-3.9150.0091No
Table: GSEA details [plain text format]



Fig 2: CSR_EARLY_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CSR_EARLY_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for CSR_EARLY_UP.V1_UP