Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetKRAS.BREAST_UP.V1_UP
Enrichment Score (ES)0.43688163
Normalized Enrichment Score (NES)1.1519085
Nominal p-value0.07462686
FDR q-value0.22929953
FWER p-Value0.891
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1Binterleukin 1 beta [Source:HGNC Symbol;Acc:HGNC:5992]34.9960.0610Yes
2LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]254.8830.1201Yes
3MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]424.7860.1782Yes
4IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]2673.6180.2163Yes
5IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]3053.5080.2582Yes
6TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]3153.4850.3006Yes
7GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]3473.3700.3409Yes
8DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]7122.5850.3627Yes
9FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]7722.4580.3911Yes
10TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]7932.4310.4203Yes
11TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]13581.8620.4278Yes
12IL2RGinterleukin 2 receptor subunit gamma [Source:HGNC Symbol;Acc:HGNC:6010]21011.2950.4235Yes
13SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]21741.2510.4369Yes
14AKAP12A-kinase anchoring protein 12 [Source:HGNC Symbol;Acc:HGNC:370]42190.5130.3878No
15TAPT1transmembrane anterior posterior transformation 1 [Source:HGNC Symbol;Acc:HGNC:26887]44280.4520.3877No
16PPP1R15Aprotein phosphatase 1 regulatory subunit 15A [Source:HGNC Symbol;Acc:HGNC:14375]48320.3370.3809No
17PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]48440.3320.3847No
18OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]55710.2310.3679No
19SYPsynaptophysin [Source:HGNC Symbol;Acc:HGNC:11506]55810.2300.3704No
20STX1Asyntaxin 1A [Source:HGNC Symbol;Acc:HGNC:11433]55910.2280.3730No
21CCL16C-C motif chemokine ligand 16 [Source:HGNC Symbol;Acc:HGNC:10614]64170.0000.3507No
22CCL22C-C motif chemokine ligand 22 [Source:HGNC Symbol;Acc:HGNC:10621]64240.0000.3505No
23SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65770.0000.3464No
24DEFB4Adefensin beta 4A [Source:HGNC Symbol;Acc:HGNC:2767]72550.0000.3281No
25ADAMDEC1ADAM like decysin 1 [Source:HGNC Symbol;Acc:HGNC:16299]72800.0000.3274No
26MAPK4mitogen-activated protein kinase 4 [Source:HGNC Symbol;Acc:HGNC:6878]85660.0000.2926No
27OPRPNopiorphin prepropeptide [Source:HGNC Symbol;Acc:HGNC:17279]85970.0000.2918No
28CYB5R2cytochrome b5 reductase 2 [Source:HGNC Symbol;Acc:HGNC:24376]86020.0000.2917No
29PRRX1paired related homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9142]87210.0000.2885No
30CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]88840.0000.2842No
31SOX17SRY-box transcription factor 17 [Source:HGNC Symbol;Acc:HGNC:18122]89060.0000.2836No
32CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]89990.0000.2811No
33CDK2AP2P3cyclin dependent kinase 2 associated protein 2 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:38494]97310.0000.2613No
34KCNA2potassium voltage-gated channel subfamily A member 2 [Source:HGNC Symbol;Acc:HGNC:6220]97500.0000.2608No
35NPAS1neuronal PAS domain protein 1 [Source:HGNC Symbol;Acc:HGNC:7894]98290.0000.2587No
36KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]98870.0000.2572No
37FAM30Afamily with sequence similarity 30 member A [Source:HGNC Symbol;Acc:HGNC:19955]99230.0000.2562No
38NFE2nuclear factor, erythroid 2 [Source:HGNC Symbol;Acc:HGNC:7780]100850.0000.2519No
39SPRR2Bsmall proline rich protein 2B [Source:HGNC Symbol;Acc:HGNC:11262]102430.0000.2476No
40IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]104740.0000.2414No
41ERC2-IT1ERC2 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:1229]105060.0000.2406No
42KLK12kallikrein related peptidase 12 [Source:HGNC Symbol;Acc:HGNC:6360]105380.0000.2397No
43KCNA10potassium voltage-gated channel subfamily A member 10 [Source:HGNC Symbol;Acc:HGNC:6219]108960.0000.2301No
44ACP3acid phosphatase 3 [Source:HGNC Symbol;Acc:HGNC:125]110260.0000.2266No
45PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]110600.0000.2257No
46ACKR4atypical chemokine receptor 4 [Source:HGNC Symbol;Acc:HGNC:1611]111850.0000.2223No
47GPR37L1G protein-coupled receptor 37 like 1 [Source:HGNC Symbol;Acc:HGNC:14923]113000.0000.2192No
48PRB4proline rich protein BstNI subfamily 4 [Source:HGNC Symbol;Acc:HGNC:9340]115630.0000.2121No
49USH2Ausherin [Source:HGNC Symbol;Acc:HGNC:12601]116000.0000.2112No
50TMPRSS4transmembrane serine protease 4 [Source:HGNC Symbol;Acc:HGNC:11878]116590.0000.2096No
51CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]118000.0000.2058No
52IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]118950.0000.2033No
53PSCAprostate stem cell antigen [Source:HGNC Symbol;Acc:HGNC:9500]119130.0000.2028No
54CMA1chymase 1 [Source:HGNC Symbol;Acc:HGNC:2097]119390.0000.2021No
55ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]120140.0000.2001No
56ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]122500.0000.1938No
57IGF2insulin like growth factor 2 [Source:HGNC Symbol;Acc:HGNC:5466]124750.0000.1877No
58TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]126130.0000.1840No
59GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]131780.0000.1687No
60OR2C1olfactory receptor family 2 subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:8242]135110.0000.1597No
61IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]138880.0000.1496No
62NDUFA4L2NDUFA4 mitochondrial complex associated like 2 [Source:HGNC Symbol;Acc:HGNC:29836]140530.0000.1451No
63EFNA5ephrin A5 [Source:HGNC Symbol;Acc:HGNC:3225]143890.0000.1361No
64HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]144770.0000.1337No
65ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]148660.0000.1232No
66IL17RBinterleukin 17 receptor B [Source:HGNC Symbol;Acc:HGNC:18015]151750.0000.1149No
67IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158860.0000.0957No
68AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]159960.0000.0927No
69MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]171880.0000.0605No
70CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]179510.0000.0399No
71DNAJA4DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]185940.0000.0225No
72PCDHGA11protocadherin gamma subfamily A, 11 [Source:HGNC Symbol;Acc:HGNC:8698]189240.0000.0136No
73SPON2spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]190390.0000.0105No
74COL9A1collagen type IX alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2217]190680.0000.0097No
75COL9A3collagen type IX alpha 3 chain [Source:HGNC Symbol;Acc:HGNC:2219]190700.0000.0097No
76BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]191660.0000.0071No
77NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]194880.000-0.0015No
78CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]195640.000-0.0036No
79CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]195650.000-0.0036No
80HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198910.000-0.0124No
81GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]200970.000-0.0179No
82NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]200980.000-0.0179No
83ETV2ETS variant transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:3491]201710.000-0.0199No
84NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]208210.000-0.0374No
85CFAP43cilia and flagella associated protein 43 [Source:HGNC Symbol;Acc:HGNC:26684]208610.000-0.0385No
86KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]210350.000-0.0432No
87KCNJ16potassium inwardly rectifying channel subfamily J member 16 [Source:HGNC Symbol;Acc:HGNC:6262]210380.000-0.0432No
88SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]213250.000-0.0510No
89SPACA1sperm acrosome associated 1 [Source:HGNC Symbol;Acc:HGNC:14967]213410.000-0.0514No
90KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]214100.000-0.0532No
91ALPPalkaline phosphatase, placental [Source:HGNC Symbol;Acc:HGNC:439]215320.000-0.0565No
92FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]216120.000-0.0586No
93ADGRD2adhesion G protein-coupled receptor D2 [Source:HGNC Symbol;Acc:HGNC:18651]216150.000-0.0587No
94CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]216970.000-0.0609No
95WNT16Wnt family member 16 [Source:HGNC Symbol;Acc:HGNC:16267]220080.000-0.0693No
96HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]221230.000-0.0723No
97ANO2anoctamin 2 [Source:HGNC Symbol;Acc:HGNC:1183]222820.000-0.0766No
98SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]228290.000-0.0914No
99OCA2OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101]234480.000-0.1081No
100A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]244250.000-0.1345No
101FMO2flavin containing dimethylaniline monoxygenase 2 [Source:HGNC Symbol;Acc:HGNC:3770]245980.000-0.1392No
102KLK6kallikrein related peptidase 6 [Source:HGNC Symbol;Acc:HGNC:6367]254620.000-0.1625No
103TFPItissue factor pathway inhibitor [Source:HGNC Symbol;Acc:HGNC:11760]256130.000-0.1666No
104MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]257030.000-0.1690No
105SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]258090.000-0.1718No
106GJA8gap junction protein alpha 8 [Source:HGNC Symbol;Acc:HGNC:4281]258830.000-0.1738No
107KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]269880.000-0.2037No
108CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]271970.000-0.2093No
109RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]272910.000-0.2118No
110CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]274620.000-0.2164No
111KRT33Bkeratin 33B [Source:HGNC Symbol;Acc:HGNC:6451]277330.000-0.2238No
112RBMY2FPRNA binding motif protein Y-linked family 2 member F, pseudogene [Source:HGNC Symbol;Acc:HGNC:23891]280460.000-0.2322No
113ANKRD36BP2ankyrin repeat domain 36B pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:33607]281920.000-0.2361No
114STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]29326-0.203-0.2643No
115PDE3Bphosphodiesterase 3B [Source:HGNC Symbol;Acc:HGNC:8779]29370-0.215-0.2628No
116TLR8toll like receptor 8 [Source:HGNC Symbol;Acc:HGNC:15632]29378-0.216-0.2604No
117CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]29786-0.311-0.2676No
118BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]30579-0.507-0.2828No
119CASS4Cas scaffold protein family member 4 [Source:HGNC Symbol;Acc:HGNC:15878]30938-0.599-0.2852No
120CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]31584-0.768-0.2933No
121MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]31593-0.768-0.2841No
122GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]31667-0.790-0.2764No
123BAIAP3BAI1 associated protein 3 [Source:HGNC Symbol;Acc:HGNC:948]32196-0.985-0.2787No
124PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]32399-1.042-0.2714No
125GSG1germ cell associated 1 [Source:HGNC Symbol;Acc:HGNC:19716]33296-1.374-0.2789No
126KCNAB3potassium voltage-gated channel subfamily A regulatory beta subunit 3 [Source:HGNC Symbol;Acc:HGNC:6230]33336-1.388-0.2629No
127LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]33374-1.410-0.2467No
128S100A5S100 calcium binding protein A5 [Source:HGNC Symbol;Acc:HGNC:10495]34185-1.711-0.2477No
129CEACAM1CEA cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:1814]34207-1.716-0.2273No
130SCELsciellin [Source:HGNC Symbol;Acc:HGNC:10573]34421-1.817-0.2109No
131SAMD14sterile alpha motif domain containing 14 [Source:HGNC Symbol;Acc:HGNC:27312]34545-1.893-0.1911No
132KIF24kinesin family member 24 [Source:HGNC Symbol;Acc:HGNC:19916]35138-2.276-0.1793No
133TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]35169-2.301-0.1520No
134KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]35282-2.316-0.1267No
135MYCNMYCN proto-oncogene, bHLH transcription factor [Source:HGNC Symbol;Acc:HGNC:7559]35334-2.334-0.0995No
136LYL1LYL1 basic helix-loop-helix family member [Source:HGNC Symbol;Acc:HGNC:6734]35369-2.367-0.0715No
137TMEM176Atransmembrane protein 176A [Source:HGNC Symbol;Acc:HGNC:24930]36199-3.170-0.0552No
138H2AC13H2A clustered histone 13 [Source:HGNC Symbol;Acc:HGNC:4725]36238-3.196-0.0172No
139KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36335-3.2880.0204No
Table: GSEA details [plain text format]



Fig 2: KRAS.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.BREAST_UP.V1_UP