Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetKRAS.KIDNEY_UP.V1_UP
Enrichment Score (ES)-0.6315675
Normalized Enrichment Score (NES)-1.3790319
Nominal p-value0.006857143
FDR q-value0.26125106
FWER p-Value0.694
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.KIDNEY_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PLCL1phospholipase C like 1 (inactive) [Source:HGNC Symbol;Acc:HGNC:9063]5082.9380.0282No
2CRTAMcytotoxic and regulatory T cell molecule [Source:HGNC Symbol;Acc:HGNC:24313]8372.3530.0529No
3ETV1ETS variant transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:3490]19841.3670.0414No
4NMNAT2nicotinamide nucleotide adenylyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:16789]20361.3320.0591No
5DDX6DEAD-box helicase 6 [Source:HGNC Symbol;Acc:HGNC:2747]20821.3020.0765No
6RAPGEF4Rap guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:16626]26611.0610.0760No
7CCND2cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583]33840.7810.0676No
8RNLSrenalase, FAD dependent amine oxidase [Source:HGNC Symbol;Acc:HGNC:25641]36820.6820.0693No
9CAB39Lcalcium binding protein 39 like [Source:HGNC Symbol;Acc:HGNC:20290]38720.6150.0730No
10GLDCglycine decarboxylase [Source:HGNC Symbol;Acc:HGNC:4313]46350.3960.0580No
11CPceruloplasmin [Source:HGNC Symbol;Acc:HGNC:2295]47480.3600.0601No
12SCN1Bsodium voltage-gated channel beta subunit 1 [Source:HGNC Symbol;Acc:HGNC:10586]52050.2390.0512No
13ADCY1adenylate cyclase 1 [Source:HGNC Symbol;Acc:HGNC:232]61010.0690.0279No
14SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65770.0000.0151No
15SCG3secretogranin III [Source:HGNC Symbol;Acc:HGNC:13707]65790.0000.0150No
16WSCD1WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]65960.0000.0146No
17CRYABcrystallin alpha B [Source:HGNC Symbol;Acc:HGNC:2389]67090.0000.0116No
18DYNC1I1dynein cytoplasmic 1 intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:2963]69300.0000.0056No
19AQP4aquaporin 4 [Source:HGNC Symbol;Acc:HGNC:637]71260.0000.0004No
20NRXN1neurexin 1 [Source:HGNC Symbol;Acc:HGNC:8008]72590.000-0.0032No
21HPCAL4hippocalcin like 4 [Source:HGNC Symbol;Acc:HGNC:18212]73110.000-0.0046No
22HEY1hes related family bHLH transcription factor with YRPW motif 1 [Source:HGNC Symbol;Acc:HGNC:4880]73690.000-0.0061No
23GPRC5BG protein-coupled receptor class C group 5 member B [Source:HGNC Symbol;Acc:HGNC:13308]73790.000-0.0064No
24ASPAaspartoacylase [Source:HGNC Symbol;Acc:HGNC:756]78610.000-0.0194No
25MPZL2myelin protein zero like 2 [Source:HGNC Symbol;Acc:HGNC:3496]79740.000-0.0224No
26EPB41L3erythrocyte membrane protein band 4.1 like 3 [Source:HGNC Symbol;Acc:HGNC:3380]81010.000-0.0258No
27PCDH9protocadherin 9 [Source:HGNC Symbol;Acc:HGNC:8661]82040.000-0.0286No
28PELI2pellino E3 ubiquitin protein ligase family member 2 [Source:HGNC Symbol;Acc:HGNC:8828]86210.000-0.0399No
29CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]88840.000-0.0469No
30SMR3Asubmaxillary gland androgen regulated protein 3A [Source:HGNC Symbol;Acc:HGNC:19216]90040.000-0.0502No
31PLSCR4phospholipid scramblase 4 [Source:HGNC Symbol;Acc:HGNC:16497]93150.000-0.0586No
32GRIA2glutamate ionotropic receptor AMPA type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4572]93440.000-0.0593No
33CDR1cerebellar degeneration related protein 1 [Source:HGNC Symbol;Acc:HGNC:1798]95580.000-0.0651No
34NEBLnebulette [Source:HGNC Symbol;Acc:HGNC:16932]97040.000-0.0690No
35NEFLneurofilament light [Source:HGNC Symbol;Acc:HGNC:7739]97220.000-0.0695No
36KCNA5potassium voltage-gated channel subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:6224]97560.000-0.0704No
37KCNJ8potassium inwardly rectifying channel subfamily J member 8 [Source:HGNC Symbol;Acc:HGNC:6269]98810.000-0.0737No
38LIMCH1LIM and calponin homology domains 1 [Source:HGNC Symbol;Acc:HGNC:29191]99000.000-0.0742No
39GRM5glutamate metabotropic receptor 5 [Source:HGNC Symbol;Acc:HGNC:4597]100130.000-0.0772No
40PMP2peripheral myelin protein 2 [Source:HGNC Symbol;Acc:HGNC:9117]104240.000-0.0883No
41RTN1reticulon 1 [Source:HGNC Symbol;Acc:HGNC:10467]105650.000-0.0921No
42CHGAchromogranin A [Source:HGNC Symbol;Acc:HGNC:1929]106160.000-0.0935No
43CHGBchromogranin B [Source:HGNC Symbol;Acc:HGNC:1930]106370.000-0.0940No
44SPARCL1SPARC like 1 [Source:HGNC Symbol;Acc:HGNC:11220]114430.000-0.1158No
45ERC2ELKS/RAB6-interacting/CAST family member 2 [Source:HGNC Symbol;Acc:HGNC:31922]115700.000-0.1192No
46SLC6A15solute carrier family 6 member 15 [Source:HGNC Symbol;Acc:HGNC:13621]119600.000-0.1297No
47SIGLEC15sialic acid binding Ig like lectin 15 [Source:HGNC Symbol;Acc:HGNC:27596]119920.000-0.1306No
48NME5NME/NM23 family member 5 [Source:HGNC Symbol;Acc:HGNC:7853]120230.000-0.1314No
49NAP1L2nucleosome assembly protein 1 like 2 [Source:HGNC Symbol;Acc:HGNC:7638]121520.000-0.1348No
50ITGBL1integrin subunit beta like 1 [Source:HGNC Symbol;Acc:HGNC:6164]124770.000-0.1436No
51GAD1glutamate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:4092]125170.000-0.1447No
52GAP43growth associated protein 43 [Source:HGNC Symbol;Acc:HGNC:4140]128340.000-0.1532No
53GCGRglucagon receptor [Source:HGNC Symbol;Acc:HGNC:4192]131550.000-0.1619No
54ESRRGestrogen related receptor gamma [Source:HGNC Symbol;Acc:HGNC:3474]133200.000-0.1663No
55VIPR2vasoactive intestinal peptide receptor 2 [Source:HGNC Symbol;Acc:HGNC:12695]134090.000-0.1687No
56RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]138700.000-0.1811No
57GHRHgrowth hormone releasing hormone [Source:HGNC Symbol;Acc:HGNC:4265]152340.000-0.2180No
58SV2Bsynaptic vesicle glycoprotein 2B [Source:HGNC Symbol;Acc:HGNC:16874]157230.000-0.2312No
59TCEAL2transcription elongation factor A like 2 [Source:HGNC Symbol;Acc:HGNC:29818]159620.000-0.2377No
60XKX-linked Kx blood group [Source:HGNC Symbol;Acc:HGNC:12811]162980.000-0.2467No
61GPM6Aglycoprotein M6A [Source:HGNC Symbol;Acc:HGNC:4460]165950.000-0.2548No
62TRIB2tribbles pseudokinase 2 [Source:HGNC Symbol;Acc:HGNC:30809]168770.000-0.2624No
63SYT1synaptotagmin 1 [Source:HGNC Symbol;Acc:HGNC:11509]170380.000-0.2667No
64GPR37G protein-coupled receptor 37 [Source:HGNC Symbol;Acc:HGNC:4494]175470.000-0.2804No
65SLC12A3solute carrier family 12 member 3 [Source:HGNC Symbol;Acc:HGNC:10912]176270.000-0.2826No
66TRIM9tripartite motif containing 9 [Source:HGNC Symbol;Acc:HGNC:16288]178590.000-0.2888No
67KITKIT proto-oncogene, receptor tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:6342]183570.000-0.3023No
68FZD3frizzled class receptor 3 [Source:HGNC Symbol;Acc:HGNC:4041]193060.000-0.3279No
69NDNnecdin, MAGE family member [Source:HGNC Symbol;Acc:HGNC:7675]193670.000-0.3295No
70GABRB1gamma-aminobutyric acid type A receptor subunit beta1 [Source:HGNC Symbol;Acc:HGNC:4081]200480.000-0.3480No
71GABRA1gamma-aminobutyric acid type A receptor subunit alpha1 [Source:HGNC Symbol;Acc:HGNC:4075]200920.000-0.3491No
72GABRA5gamma-aminobutyric acid type A receptor subunit alpha5 [Source:HGNC Symbol;Acc:HGNC:4079]200950.000-0.3492No
73NOL4nucleolar protein 4 [Source:HGNC Symbol;Acc:HGNC:7870]204390.000-0.3585No
74WIF1WNT inhibitory factor 1 [Source:HGNC Symbol;Acc:HGNC:18081]204420.000-0.3585No
75CFAP69cilia and flagella associated protein 69 [Source:HGNC Symbol;Acc:HGNC:26107]205410.000-0.3612No
76SFRP1secreted frizzled related protein 1 [Source:HGNC Symbol;Acc:HGNC:10776]207520.000-0.3668No
77DLGAP2DLG associated protein 2 [Source:HGNC Symbol;Acc:HGNC:2906]212380.000-0.3800No
78SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]213250.000-0.3823No
79FAM153Bfamily with sequence similarity 153 member B [Source:HGNC Symbol;Acc:HGNC:27323]215760.000-0.3891No
80CRYMcrystallin mu [Source:HGNC Symbol;Acc:HGNC:2418]216030.000-0.3898No
81SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]218730.000-0.3970No
82LMO3LIM domain only 3 [Source:HGNC Symbol;Acc:HGNC:6643]219490.000-0.3991No
83ANK3ankyrin 3 [Source:HGNC Symbol;Acc:HGNC:494]222380.000-0.4069No
84FGF9fibroblast growth factor 9 [Source:HGNC Symbol;Acc:HGNC:3687]227620.000-0.4210No
85ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]230420.000-0.4286No
86SOBPsine oculis binding protein homolog [Source:HGNC Symbol;Acc:HGNC:29256]233380.000-0.4366No
87SLC6A1solute carrier family 6 member 1 [Source:HGNC Symbol;Acc:HGNC:11042]234280.000-0.4390No
88PLCB1phospholipase C beta 1 [Source:HGNC Symbol;Acc:HGNC:15917]234460.000-0.4394No
89PNMA2PNMA family member 2 [Source:HGNC Symbol;Acc:HGNC:9159]239160.000-0.4521No
90MAGEH1MAGE family member H1 [Source:HGNC Symbol;Acc:HGNC:24092]241650.000-0.4588No
91A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]244250.000-0.4658No
92SLC1A3solute carrier family 1 member 3 [Source:HGNC Symbol;Acc:HGNC:10941]244820.000-0.4673No
93PLGLAplasminogen like A (pseudogene) [Source:HGNC Symbol;Acc:HGNC:9074]245370.000-0.4688No
94AK5adenylate kinase 5 [Source:HGNC Symbol;Acc:HGNC:365]246710.000-0.4724No
95RCAN2regulator of calcineurin 2 [Source:HGNC Symbol;Acc:HGNC:3041]247100.000-0.4734No
96GABRR2gamma-aminobutyric acid type A receptor subunit rho2 [Source:HGNC Symbol;Acc:HGNC:4091]248700.000-0.4777No
97SCN2Asodium voltage-gated channel alpha subunit 2 [Source:HGNC Symbol;Acc:HGNC:10588]250740.000-0.4832No
98MMP27matrix metallopeptidase 27 [Source:HGNC Symbol;Acc:HGNC:14250]256960.000-0.5000No
99RIT2Ras like without CAAX 2 [Source:HGNC Symbol;Acc:HGNC:10017]257900.000-0.5026No
100PCP4Purkinje cell protein 4 [Source:HGNC Symbol;Acc:HGNC:8742]258160.000-0.5032No
101ARPP21cAMP regulated phosphoprotein 21 [Source:HGNC Symbol;Acc:HGNC:16968]259090.000-0.5057No
102PEG3paternally expressed 3 [Source:HGNC Symbol;Acc:HGNC:8826]264230.000-0.5196No
103SATB1SATB homeobox 1 [Source:HGNC Symbol;Acc:HGNC:10541]265660.000-0.5234No
104TRILTLR4 interactor with leucine rich repeats [Source:HGNC Symbol;Acc:HGNC:22200]267310.000-0.5279No
105ZNF536zinc finger protein 536 [Source:HGNC Symbol;Acc:HGNC:29025]268720.000-0.5317No
106NRCAMneuronal cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:7994]277850.000-0.5564No
107MAP7microtubule associated protein 7 [Source:HGNC Symbol;Acc:HGNC:6869]284070.000-0.5732No
108GRIK2glutamate ionotropic receptor kainate type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4580]29254-0.188-0.5934No
109CPEB3cytoplasmic polyadenylation element binding protein 3 [Source:HGNC Symbol;Acc:HGNC:21746]29410-0.219-0.5944No
110CPEcarboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303]29878-0.328-0.6024No
111NUDT11nudix hydrolase 11 [Source:HGNC Symbol;Acc:HGNC:18011]29907-0.333-0.5984No
112SLC12A5solute carrier family 12 member 5 [Source:HGNC Symbol;Acc:HGNC:13818]30244-0.417-0.6015No
113SELENOPselenoprotein P [Source:HGNC Symbol;Acc:HGNC:10751]30294-0.431-0.5967No
114DNM3dynamin 3 [Source:HGNC Symbol;Acc:HGNC:29125]30446-0.479-0.5940No
115ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]30599-0.512-0.5908No
116ANK2ankyrin 2 [Source:HGNC Symbol;Acc:HGNC:493]31940-0.892-0.6143No
117SERPINI1serpin family I member 1 [Source:HGNC Symbol;Acc:HGNC:8943]32580-1.109-0.6157Yes
118TSPAN7tetraspanin 7 [Source:HGNC Symbol;Acc:HGNC:11854]32662-1.136-0.6017Yes
119TMEM100transmembrane protein 100 [Source:HGNC Symbol;Acc:HGNC:25607]32750-1.163-0.5874Yes
120CA2carbonic anhydrase 2 [Source:HGNC Symbol;Acc:HGNC:1373]32997-1.257-0.5761Yes
121MAFBMAF bZIP transcription factor B [Source:HGNC Symbol;Acc:HGNC:6408]33055-1.276-0.5595Yes
122DUSP6dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:HGNC:3072]34100-1.666-0.5639Yes
123TMOD1tropomodulin 1 [Source:HGNC Symbol;Acc:HGNC:11871]34145-1.687-0.5410Yes
124CDK5R1cyclin dependent kinase 5 regulatory subunit 1 [Source:HGNC Symbol;Acc:HGNC:1775]34146-1.687-0.5169Yes
125EMP1epithelial membrane protein 1 [Source:HGNC Symbol;Acc:HGNC:3333]34230-1.732-0.4944Yes
126TUBB4Atubulin beta 4A class IVa [Source:HGNC Symbol;Acc:HGNC:20774]34268-1.750-0.4705Yes
127KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]34412-1.813-0.4484Yes
128GATMglycine amidinotransferase [Source:HGNC Symbol;Acc:HGNC:4175]35120-2.265-0.4352Yes
129NRN1neuritin 1 [Source:HGNC Symbol;Acc:HGNC:17972]35198-2.312-0.4043Yes
130ATP1A2ATPase Na+/K+ transporting subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:800]36022-2.955-0.3844Yes
131GPR19G protein-coupled receptor 19 [Source:HGNC Symbol;Acc:HGNC:4473]36165-3.120-0.3437Yes
132MEF2Cmyocyte enhancer factor 2C [Source:HGNC Symbol;Acc:HGNC:6996]36286-3.223-0.3009Yes
133GPNMBglycoprotein nmb [Source:HGNC Symbol;Acc:HGNC:4462]36436-3.433-0.2559Yes
134SORBS1sorbin and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:14565]36572-3.604-0.2081Yes
135PLP1proteolipid protein 1 [Source:HGNC Symbol;Acc:HGNC:9086]36665-3.749-0.1570Yes
136TRIM2tripartite motif containing 2 [Source:HGNC Symbol;Acc:HGNC:15974]36668-3.755-0.1035Yes
137SORL1sortilin related receptor 1 [Source:HGNC Symbol;Acc:HGNC:11185]36717-3.849-0.0498Yes
138METTL7Amethyltransferase like 7A [Source:HGNC Symbol;Acc:HGNC:24550]36882-4.1920.0056Yes
Table: GSEA details [plain text format]



Fig 2: KRAS.KIDNEY_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.KIDNEY_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.KIDNEY_UP.V1_UP