Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetKRAS.LUNG.BREAST_UP.V1_UP
Enrichment Score (ES)0.5750254
Normalized Enrichment Score (NES)1.4963276
Nominal p-value0.0
FDR q-value0.18754818
FWER p-Value0.096
Table: GSEA Results Summary



Fig 1: Enrichment plot: KRAS.LUNG.BREAST_UP.V1_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CSF3colony stimulating factor 3 [Source:HGNC Symbol;Acc:HGNC:2438]174.9290.0482Yes
2PTGS2prostaglandin-endoperoxide synthase 2 [Source:HGNC Symbol;Acc:HGNC:9605]184.9240.0968Yes
3LIFLIF interleukin 6 family cytokine [Source:HGNC Symbol;Acc:HGNC:6596]254.8830.1449Yes
4MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]424.7860.1917Yes
5ISG20interferon stimulated exonuclease gene 20 [Source:HGNC Symbol;Acc:HGNC:6130]864.4790.2348Yes
6POLMDNA polymerase mu [Source:HGNC Symbol;Acc:HGNC:9185]2353.7450.2678Yes
7IL1RL1interleukin 1 receptor like 1 [Source:HGNC Symbol;Acc:HGNC:5998]2673.6180.3027Yes
8IL13RA2interleukin 13 receptor subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:5975]3053.5080.3363Yes
9TRAF1TNF receptor associated factor 1 [Source:HGNC Symbol;Acc:HGNC:12031]3153.4850.3705Yes
10GLRXglutaredoxin [Source:HGNC Symbol;Acc:HGNC:4330]3473.3700.4030Yes
11ID2inhibitor of DNA binding 2 [Source:HGNC Symbol;Acc:HGNC:5361]5812.7590.4239Yes
12DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]7122.5850.4459Yes
13FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]7722.4580.4686Yes
14TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]7932.4310.4921Yes
15ETS1ETS proto-oncogene 1, transcription factor [Source:HGNC Symbol;Acc:HGNC:3488]9582.2030.5094Yes
16GPR4G protein-coupled receptor 4 [Source:HGNC Symbol;Acc:HGNC:4497]12141.8790.5210Yes
17TAGLN3transgelin 3 [Source:HGNC Symbol;Acc:HGNC:29868]13581.8620.5356Yes
18INHBAinhibin subunit beta A [Source:HGNC Symbol;Acc:HGNC:6066]20481.3230.5300Yes
19SH2D2ASH2 domain containing 2A [Source:HGNC Symbol;Acc:HGNC:10821]21111.2900.5410Yes
20HBEGFheparin binding EGF like growth factor [Source:HGNC Symbol;Acc:HGNC:3059]21711.2530.5518Yes
21SPRY2sprouty RTK signaling antagonist 2 [Source:HGNC Symbol;Acc:HGNC:11270]21741.2510.5641Yes
22NDOR1NADPH dependent diflavin oxidoreductase 1 [Source:HGNC Symbol;Acc:HGNC:29838]22201.2270.5750Yes
23TNFSF15TNF superfamily member 15 [Source:HGNC Symbol;Acc:HGNC:11931]27061.0470.5722No
24RREB1ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]31380.8660.5691No
25DOCK4dedicator of cytokinesis 4 [Source:HGNC Symbol;Acc:HGNC:19192]36210.6980.5630No
26MYH2myosin heavy chain 2 [Source:HGNC Symbol;Acc:HGNC:7572]47320.3650.5365No
27PRDM1PR/SET domain 1 [Source:HGNC Symbol;Acc:HGNC:9346]48440.3320.5368No
28ADAM8ADAM metallopeptidase domain 8 [Source:HGNC Symbol;Acc:HGNC:215]49350.3070.5374No
29OSBP2oxysterol binding protein 2 [Source:HGNC Symbol;Acc:HGNC:8504]52040.2390.5325No
30GYPCglycophorin C (Gerbich blood group) [Source:HGNC Symbol;Acc:HGNC:4704]54660.2390.5278No
31OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]55710.2310.5273No
32RPS4Y1ribosomal protein S4 Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:10425]63530.0010.5062No
33CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64270.0000.5042No
34SCG5secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816]65770.0000.5002No
35RNASE1ribonuclease A family member 1, pancreatic [Source:HGNC Symbol;Acc:HGNC:10044]73120.0000.4803No
36SLCO5A1solute carrier organic anion transporter family member 5A1 [Source:HGNC Symbol;Acc:HGNC:19046]73320.0000.4798No
37CD247CD247 molecule [Source:HGNC Symbol;Acc:HGNC:1677]82080.0000.4561No
38SHOXshort stature homeobox [Source:HGNC Symbol;Acc:HGNC:10853]82610.0000.4547No
39CALB1calbindin 1 [Source:HGNC Symbol;Acc:HGNC:1434]88840.0000.4379No
40CLSTN2calsyntenin 2 [Source:HGNC Symbol;Acc:HGNC:17448]89990.0000.4348No
41ADAM19ADAM metallopeptidase domain 19 [Source:HGNC Symbol;Acc:HGNC:197]99770.0000.4083No
42LAT2linker for activation of T cells family member 2 [Source:HGNC Symbol;Acc:HGNC:12749]105230.0000.3936No
43FAM174Bfamily with sequence similarity 174 member B [Source:HGNC Symbol;Acc:HGNC:34339]105530.0000.3928No
44PPBPpro-platelet basic protein [Source:HGNC Symbol;Acc:HGNC:9240]110600.0000.3791No
45TFDP3transcription factor Dp family member 3 [Source:HGNC Symbol;Acc:HGNC:24603]112780.0000.3732No
46TSPAN1tetraspanin 1 [Source:HGNC Symbol;Acc:HGNC:20657]116330.0000.3636No
47CLPScolipase [Source:HGNC Symbol;Acc:HGNC:2085]118000.0000.3592No
48IGFBP3insulin like growth factor binding protein 3 [Source:HGNC Symbol;Acc:HGNC:5472]118950.0000.3566No
49ESM1endothelial cell specific molecule 1 [Source:HGNC Symbol;Acc:HGNC:3466]120140.0000.3534No
50TAAR5trace amine associated receptor 5 [Source:HGNC Symbol;Acc:HGNC:30236]126130.0000.3372No
51GBA3glucosylceramidase beta 3 (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:19069]127240.0000.3343No
52RBP4retinol binding protein 4 [Source:HGNC Symbol;Acc:HGNC:9922]128730.0000.3303No
53RBMXL2RBMX like 2 [Source:HGNC Symbol;Acc:HGNC:17886]130050.0000.3267No
54GULP1GULP PTB domain containing engulfment adaptor 1 [Source:HGNC Symbol;Acc:HGNC:18649]131780.0000.3221No
55HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]132510.0000.3201No
56OR2B6olfactory receptor family 2 subfamily B member 6 [Source:HGNC Symbol;Acc:HGNC:8241]135180.0000.3129No
57KIAA1549LKIAA1549 like [Source:HGNC Symbol;Acc:HGNC:24836]137390.0000.3069No
58RELNreelin [Source:HGNC Symbol;Acc:HGNC:9957]138700.0000.3034No
59IL37interleukin 37 [Source:HGNC Symbol;Acc:HGNC:15563]138880.0000.3030No
60RETNresistin [Source:HGNC Symbol;Acc:HGNC:20389]139920.0000.3002No
61HSD11B1hydroxysteroid 11-beta dehydrogenase 1 [Source:HGNC Symbol;Acc:HGNC:5208]144770.0000.2871No
62ZP4zona pellucida glycoprotein 4 [Source:HGNC Symbol;Acc:HGNC:15770]148660.0000.2766No
63G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]158040.0000.2512No
64IL1R2interleukin 1 receptor type 2 [Source:HGNC Symbol;Acc:HGNC:5994]158860.0000.2490No
65IL23Ainterleukin 23 subunit alpha [Source:HGNC Symbol;Acc:HGNC:15488]158880.0000.2490No
66AMELYamelogenin Y-linked [Source:HGNC Symbol;Acc:HGNC:462]159960.0000.2461No
67MGLLmonoglyceride lipase [Source:HGNC Symbol;Acc:HGNC:17038]171880.0000.2139No
68GRPgastrin releasing peptide [Source:HGNC Symbol;Acc:HGNC:4605]171900.0000.2139No
69SEMA3Bsemaphorin 3B [Source:HGNC Symbol;Acc:HGNC:10724]179250.0000.1940No
70CEACAM3CEA cell adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:1815]179510.0000.1933No
71IGHV3-48immunoglobulin heavy variable 3-48 [Source:HGNC Symbol;Acc:HGNC:5606]183040.0000.1838No
72BMP6bone morphogenetic protein 6 [Source:HGNC Symbol;Acc:HGNC:1073]191660.0000.1605No
73MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191990.0000.1596No
74NRLneural retina leucine zipper [Source:HGNC Symbol;Acc:HGNC:8002]194880.0000.1518No
75CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]195530.0000.1501No
76CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]195620.0000.1499No
77CXCL3C-X-C motif chemokine ligand 3 [Source:HGNC Symbol;Acc:HGNC:4604]195640.0000.1498No
78CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]195650.0000.1498No
79CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]195670.0000.1498No
80TBX3T-box transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:11602]198330.0000.1426No
81HSD17B2hydroxysteroid 17-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5211]198910.0000.1411No
82GABRA3gamma-aminobutyric acid type A receptor subunit alpha3 [Source:HGNC Symbol;Acc:HGNC:4077]200970.0000.1356No
83NR1H4nuclear receptor subfamily 1 group H member 4 [Source:HGNC Symbol;Acc:HGNC:7967]200980.0000.1356No
84NELL2neural EGFL like 2 [Source:HGNC Symbol;Acc:HGNC:7751]207380.0000.1183No
85SLC25A31solute carrier family 25 member 31 [Source:HGNC Symbol;Acc:HGNC:25319]207400.0000.1182No
86NPPBnatriuretic peptide B [Source:HGNC Symbol;Acc:HGNC:7940]208210.0000.1161No
87TSPY1testis specific protein Y-linked 1 [Source:HGNC Symbol;Acc:HGNC:12381]209280.0000.1132No
88KCNJ14potassium inwardly rectifying channel subfamily J member 14 [Source:HGNC Symbol;Acc:HGNC:6260]210350.0000.1103No
89SNAP25synaptosome associated protein 25 [Source:HGNC Symbol;Acc:HGNC:11132]213250.0000.1025No
90KCNK15potassium two pore domain channel subfamily K member 15 [Source:HGNC Symbol;Acc:HGNC:13814]214100.0000.1002No
91DNAH9dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]215910.0000.0954No
92FAM155Bfamily with sequence similarity 155 member B [Source:HGNC Symbol;Acc:HGNC:30701]216120.0000.0948No
93CSF2colony stimulating factor 2 [Source:HGNC Symbol;Acc:HGNC:2434]216970.0000.0926No
94SNAP91synaptosome associated protein 91 [Source:HGNC Symbol;Acc:HGNC:14986]218730.0000.0878No
95IFNA8interferon alpha 8 [Source:HGNC Symbol;Acc:HGNC:5429]218890.0000.0874No
96CHRNA2cholinergic receptor nicotinic alpha 2 subunit [Source:HGNC Symbol;Acc:HGNC:1956]219710.0000.0852No
97HAS2hyaluronan synthase 2 [Source:HGNC Symbol;Acc:HGNC:4819]221230.0000.0811No
98PTPRRprotein tyrosine phosphatase receptor type R [Source:HGNC Symbol;Acc:HGNC:9680]222570.0000.0775No
99TTC22tetratricopeptide repeat domain 22 [Source:HGNC Symbol;Acc:HGNC:26067]226220.0000.0677No
100PRSS3serine protease 3 [Source:HGNC Symbol;Acc:HGNC:9486]226910.0000.0658No
101SMPXsmall muscle protein X-linked [Source:HGNC Symbol;Acc:HGNC:11122]228290.0000.0621No
102PDCD1LG2programmed cell death 1 ligand 2 [Source:HGNC Symbol;Acc:HGNC:18731]229320.0000.0594No
103FNDC8fibronectin type III domain containing 8 [Source:HGNC Symbol;Acc:HGNC:25286]232280.0000.0514No
104ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]238360.0000.0350No
105A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]244250.0000.0190No
106PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]248670.0000.0071No
107PRYPTPN13 like Y-linked [Source:HGNC Symbol;Acc:HGNC:14024]248740.0000.0069No
108MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]257030.000-0.0155No
109SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]258090.000-0.0183No
110KRT34keratin 34 [Source:HGNC Symbol;Acc:HGNC:6452]269880.000-0.0502No
111CRCT1cysteine rich C-terminal 1 [Source:HGNC Symbol;Acc:HGNC:29875]271970.000-0.0558No
112RMSTrhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]272910.000-0.0583No
113NAV3neuron navigator 3 [Source:HGNC Symbol;Acc:HGNC:15998]274220.000-0.0618No
114CMKLR1chemerin chemokine-like receptor 1 [Source:HGNC Symbol;Acc:HGNC:2121]274620.000-0.0629No
115CD1ACD1a molecule [Source:HGNC Symbol;Acc:HGNC:1634]280960.000-0.0800No
116CCR6C-C motif chemokine receptor 6 [Source:HGNC Symbol;Acc:HGNC:1607]281400.000-0.0812No
117STC1stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373]29326-0.203-0.1113No
118ATG10autophagy related 10 [Source:HGNC Symbol;Acc:HGNC:20315]29568-0.255-0.1153No
119ADAMTS6ADAM metallopeptidase with thrombospondin type 1 motif 6 [Source:HGNC Symbol;Acc:HGNC:222]29570-0.255-0.1128No
120CDSNcorneodesmosin [Source:HGNC Symbol;Acc:HGNC:1802]29786-0.311-0.1155No
121CD37CD37 molecule [Source:HGNC Symbol;Acc:HGNC:1666]29845-0.318-0.1140No
122ZNF639zinc finger protein 639 [Source:HGNC Symbol;Acc:HGNC:30950]29872-0.325-0.1114No
123BIRC3baculoviral IAP repeat containing 3 [Source:HGNC Symbol;Acc:HGNC:591]30579-0.507-0.1256No
124ST3GAL6ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:18080]30599-0.512-0.1210No
125AKT2AKT serine/threonine kinase 2 [Source:HGNC Symbol;Acc:HGNC:392]30912-0.594-0.1236No
126HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]31186-0.670-0.1244No
127CTNNA2catenin alpha 2 [Source:HGNC Symbol;Acc:HGNC:2510]31584-0.768-0.1275No
128MKRN3makorin ring finger protein 3 [Source:HGNC Symbol;Acc:HGNC:7114]31593-0.768-0.1201No
129GFI1growth factor independent 1 transcriptional repressor [Source:HGNC Symbol;Acc:HGNC:4237]31667-0.790-0.1143No
130PDE2Aphosphodiesterase 2A [Source:HGNC Symbol;Acc:HGNC:8777]32399-1.042-0.1238No
131LILRA6leukocyte immunoglobulin like receptor A6 [Source:HGNC Symbol;Acc:HGNC:15495]33374-1.410-0.1363No
132ITPKAinositol-trisphosphate 3-kinase A [Source:HGNC Symbol;Acc:HGNC:6178]34165-1.696-0.1409No
133KIF5Ckinesin family member 5C [Source:HGNC Symbol;Acc:HGNC:6325]34412-1.813-0.1296No
134ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]34527-1.879-0.1142No
135LDB3LIM domain binding 3 [Source:HGNC Symbol;Acc:HGNC:15710]34788-2.039-0.1011No
136SLCO4A1solute carrier organic anion transporter family member 4A1 [Source:HGNC Symbol;Acc:HGNC:10953]35051-2.211-0.0863No
137TERTtelomerase reverse transcriptase [Source:HGNC Symbol;Acc:HGNC:11730]35169-2.301-0.0668No
138KCNC2potassium voltage-gated channel subfamily C member 2 [Source:HGNC Symbol;Acc:HGNC:6234]35282-2.316-0.0469No
139CCDC181coiled-coil domain containing 181 [Source:HGNC Symbol;Acc:HGNC:28051]35681-2.618-0.0318No
140KIF5Akinesin family member 5A [Source:HGNC Symbol;Acc:HGNC:6323]36335-3.288-0.0170No
141KCNC1potassium voltage-gated channel subfamily C member 1 [Source:HGNC Symbol;Acc:HGNC:6233]36689-3.7910.0109No
Table: GSEA details [plain text format]



Fig 2: KRAS.LUNG.BREAST_UP.V1_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KRAS.LUNG.BREAST_UP.V1_UP: Random ES distribution   
Gene set null distribution of ES for KRAS.LUNG.BREAST_UP.V1_UP