Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetP53_DN.V2_UP
Enrichment Score (ES)0.45447162
Normalized Enrichment Score (NES)1.1867785
Nominal p-value0.053846154
FDR q-value0.1891719
FWER p-Value0.793
Table: GSEA Results Summary



Fig 1: Enrichment plot: P53_DN.V2_UP   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IL1RNinterleukin 1 receptor antagonist [Source:HGNC Symbol;Acc:HGNC:6000]124.9750.0449Yes
2CCL4C-C motif chemokine ligand 4 [Source:HGNC Symbol;Acc:HGNC:10630]564.6610.0860Yes
3CD83CD83 molecule [Source:HGNC Symbol;Acc:HGNC:1703]1973.8880.1175Yes
4OSGIN2oxidative stress induced growth inhibitor family member 2 [Source:HGNC Symbol;Acc:HGNC:1355]2383.7150.1502Yes
5SYN1synapsin I [Source:HGNC Symbol;Acc:HGNC:11494]2843.5600.1813Yes
6IER3immediate early response 3 [Source:HGNC Symbol;Acc:HGNC:5392]3373.4350.2111Yes
7NFKBIANFKB inhibitor alpha [Source:HGNC Symbol;Acc:HGNC:7797]3573.3330.2408Yes
8MMP13matrix metallopeptidase 13 [Source:HGNC Symbol;Acc:HGNC:7159]4922.9540.2640Yes
9HAO1hydroxyacid oxidase 1 [Source:HGNC Symbol;Acc:HGNC:4809]6982.6070.2821Yes
10FCRL2Fc receptor like 2 [Source:HGNC Symbol;Acc:HGNC:14875]7722.4580.3025Yes
11TNFAIP3TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]7932.4310.3240Yes
12FOSL2FOS like 2, AP-1 transcription factor subunit [Source:HGNC Symbol;Acc:HGNC:3798]8102.3980.3454Yes
13CLCF1cardiotrophin like cytokine factor 1 [Source:HGNC Symbol;Acc:HGNC:17412]8302.3680.3663Yes
14MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]8812.3190.3860Yes
15ME3malic enzyme 3 [Source:HGNC Symbol;Acc:HGNC:6985]9132.2690.4058Yes
16P2RY6pyrimidinergic receptor P2Y6 [Source:HGNC Symbol;Acc:HGNC:8543]9302.2420.4257Yes
17EVI2Aecotropic viral integration site 2A [Source:HGNC Symbol;Acc:HGNC:3499]10832.0450.4402Yes
18CYP2C8cytochrome P450 family 2 subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:2622]13531.8690.4499Yes
19IKZF1IKAROS family zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:13176]17051.5530.4545Yes
20PTK2Bprotein tyrosine kinase 2 beta [Source:HGNC Symbol;Acc:HGNC:9612]21861.2440.4528No
21CH25Hcholesterol 25-hydroxylase [Source:HGNC Symbol;Acc:HGNC:1907]29730.9390.4400No
22TUBB1tubulin beta 1 class VI [Source:HGNC Symbol;Acc:HGNC:16257]33440.7900.4372No
23NCKAP1LNCK associated protein 1 like [Source:HGNC Symbol;Acc:HGNC:4862]36630.6900.4348No
24CEACAM5CEA cell adhesion molecule 5 [Source:HGNC Symbol;Acc:HGNC:1817]42050.5160.4249No
25PRKCEprotein kinase C epsilon [Source:HGNC Symbol;Acc:HGNC:9401]42370.5040.4286No
26SDC4syndecan 4 [Source:HGNC Symbol;Acc:HGNC:10661]46700.3810.4204No
27OSGIN1oxidative stress induced growth inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:30093]55710.2310.3981No
28CCL20C-C motif chemokine ligand 20 [Source:HGNC Symbol;Acc:HGNC:10619]64270.0000.3750No
29FGF22fibroblast growth factor 22 [Source:HGNC Symbol;Acc:HGNC:3679]69530.0000.3608No
30PRDM11PR/SET domain 11 [Source:HGNC Symbol;Acc:HGNC:13996]70030.0000.3594No
31ANGPTL3angiopoietin like 3 [Source:HGNC Symbol;Acc:HGNC:491]70230.0000.3589No
32PPEF1protein phosphatase with EF-hand domain 1 [Source:HGNC Symbol;Acc:HGNC:9243]70640.0000.3578No
33C4BPAcomplement component 4 binding protein alpha [Source:HGNC Symbol;Acc:HGNC:1325]72830.0000.3519No
34PKD2L1polycystin 2 like 1, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9011]78990.0000.3353No
35PCDH1protocadherin 1 [Source:HGNC Symbol;Acc:HGNC:8655]81990.0000.3272No
36GUCY2Dguanylate cyclase 2D, retinal [Source:HGNC Symbol;Acc:HGNC:4689]84990.0000.3191No
37GPA33glycoprotein A33 [Source:HGNC Symbol;Acc:HGNC:4445]86250.0000.3157No
38BARX2BARX homeobox 2 [Source:HGNC Symbol;Acc:HGNC:956]87080.0000.3135No
39CDH4cadherin 4 [Source:HGNC Symbol;Acc:HGNC:1763]94850.0000.2925No
40TNFRSF9TNF receptor superfamily member 9 [Source:HGNC Symbol;Acc:HGNC:11924]98420.0000.2829No
41KCNK3potassium two pore domain channel subfamily K member 3 [Source:HGNC Symbol;Acc:HGNC:6278]98870.0000.2817No
42ADAM12ADAM metallopeptidase domain 12 [Source:HGNC Symbol;Acc:HGNC:190]99790.0000.2792No
43HS3ST2heparan sulfate-glucosamine 3-sulfotransferase 2 [Source:HGNC Symbol;Acc:HGNC:5195]100540.0000.2772No
44APOL3apolipoprotein L3 [Source:HGNC Symbol;Acc:HGNC:14868]101300.0000.2752No
45GSC2goosecoid homeobox 2 [Source:HGNC Symbol;Acc:HGNC:4613]102170.0000.2729No
46SPRR2Csmall proline rich protein 2C (pseudogene) [Source:HGNC Symbol;Acc:HGNC:11263]102440.0000.2722No
47SPRR1Bsmall proline rich protein 1B [Source:HGNC Symbol;Acc:HGNC:11260]102540.0000.2719No
48CYP2D6cytochrome P450 family 2 subfamily D member 6 [Source:HGNC Symbol;Acc:HGNC:2625]103750.0000.2687No
49IL1RAPL1interleukin 1 receptor accessory protein like 1 [Source:HGNC Symbol;Acc:HGNC:5996]104740.0000.2660No
50RFPL2ret finger protein like 2 [Source:HGNC Symbol;Acc:HGNC:9979]105970.0000.2627No
51NTRK3neurotrophic receptor tyrosine kinase 3 [Source:HGNC Symbol;Acc:HGNC:8033]110340.0000.2509No
52LRRC32leucine rich repeat containing 32 [Source:HGNC Symbol;Acc:HGNC:4161]114940.0000.2385No
53GYPBglycophorin B (MNS blood group) [Source:HGNC Symbol;Acc:HGNC:4703]119780.0000.2254No
54NTSR1neurotensin receptor 1 [Source:HGNC Symbol;Acc:HGNC:8039]119860.0000.2252No
55ATP12AATPase H+/K+ transporting non-gastric alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:13816]122500.0000.2181No
56LGSNlengsin, lens protein with glutamine synthetase domain [Source:HGNC Symbol;Acc:HGNC:21016]122610.0000.2178No
57TNRtenascin R [Source:HGNC Symbol;Acc:HGNC:11953]126660.0000.2069No
58AVPR2arginine vasopressin receptor 2 [Source:HGNC Symbol;Acc:HGNC:897]127090.0000.2058No
59PCDHA6protocadherin alpha 6 [Source:HGNC Symbol;Acc:HGNC:8672]140250.0000.1702No
60ANXA10annexin A10 [Source:HGNC Symbol;Acc:HGNC:534]143810.0000.1605No
61TNNI3KTNNI3 interacting kinase [Source:HGNC Symbol;Acc:HGNC:19661]145460.0000.1561No
62HTR1E5-hydroxytryptamine receptor 1E [Source:HGNC Symbol;Acc:HGNC:5291]155700.0000.1284No
63BPIbactericidal permeability increasing protein [Source:HGNC Symbol;Acc:HGNC:1095]155930.0000.1278No
64IL36Ainterleukin 36 alpha [Source:HGNC Symbol;Acc:HGNC:15562]156140.0000.1273No
65CA3carbonic anhydrase 3 [Source:HGNC Symbol;Acc:HGNC:1374]156970.0000.1251No
66AMELXamelogenin X-linked [Source:HGNC Symbol;Acc:HGNC:461]159950.0000.1170No
67FPR3formyl peptide receptor 3 [Source:HGNC Symbol;Acc:HGNC:3828]160990.0000.1142No
68RNF39ring finger protein 39 [Source:HGNC Symbol;Acc:HGNC:18064]165610.0000.1018No
69ITM2Aintegral membrane protein 2A [Source:HGNC Symbol;Acc:HGNC:6173]166290.0000.0999No
70DLX6distal-less homeobox 6 [Source:HGNC Symbol;Acc:HGNC:2919]168120.0000.0950No
71GP5glycoprotein V platelet [Source:HGNC Symbol;Acc:HGNC:4443]171610.0000.0856No
72SLC38A3solute carrier family 38 member 3 [Source:HGNC Symbol;Acc:HGNC:18044]176130.0000.0734No
73DPYSdihydropyrimidinase [Source:HGNC Symbol;Acc:HGNC:3013]181470.0000.0590No
74CHST8carbohydrate sulfotransferase 8 [Source:HGNC Symbol;Acc:HGNC:15993]181750.0000.0582No
75BFSP2beaded filament structural protein 2 [Source:HGNC Symbol;Acc:HGNC:1041]182690.0000.0557No
76CXCL12C-X-C motif chemokine ligand 12 [Source:HGNC Symbol;Acc:HGNC:10672]190010.0000.0359No
77MOGmyelin oligodendrocyte glycoprotein [Source:HGNC Symbol;Acc:HGNC:7197]190960.0000.0334No
78MPZmyelin protein zero [Source:HGNC Symbol;Acc:HGNC:7225]191240.0000.0326No
79MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]192030.0000.0305No
80CXCL6C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643]195480.0000.0212No
81CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]195530.0000.0211No
82CXCL1C-X-C motif chemokine ligand 1 [Source:HGNC Symbol;Acc:HGNC:4602]195620.0000.0209No
83CXCL2C-X-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:4603]195650.0000.0208No
84CXCL5C-X-C motif chemokine ligand 5 [Source:HGNC Symbol;Acc:HGNC:10642]195670.0000.0208No
85CYP17A1cytochrome P450 family 17 subfamily A member 1 [Source:HGNC Symbol;Acc:HGNC:2593]198890.0000.0121No
86CHRNA10cholinergic receptor nicotinic alpha 10 subunit [Source:HGNC Symbol;Acc:HGNC:13800]198920.0000.0121No
87PDCphosducin [Source:HGNC Symbol;Acc:HGNC:8759]200750.0000.0071No
88PTX3pentraxin 3 [Source:HGNC Symbol;Acc:HGNC:9692]202020.0000.0037No
89FOXL2forkhead box L2 [Source:HGNC Symbol;Acc:HGNC:1092]207040.000-0.0098No
90CYP2A13cytochrome P450 family 2 subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:2608]207990.000-0.0124No
91EVX1even-skipped homeobox 1 [Source:HGNC Symbol;Acc:HGNC:3506]208450.000-0.0136No
92LALBAlactalbumin alpha [Source:HGNC Symbol;Acc:HGNC:6480]211330.000-0.0214No
93KCNMB1potassium calcium-activated channel subfamily M regulatory beta subunit 1 [Source:HGNC Symbol;Acc:HGNC:6285]220760.000-0.0469No
94WNT3Wnt family member 3 [Source:HGNC Symbol;Acc:HGNC:12782]223240.000-0.0535No
95SLC4A10solute carrier family 4 member 10 [Source:HGNC Symbol;Acc:HGNC:13811]227950.000-0.0663No
96PRTN3proteinase 3 [Source:HGNC Symbol;Acc:HGNC:9495]230090.000-0.0720No
97RIPK4receptor interacting serine/threonine kinase 4 [Source:HGNC Symbol;Acc:HGNC:496]231440.000-0.0757No
98OR10H3olfactory receptor family 10 subfamily H member 3 [Source:HGNC Symbol;Acc:HGNC:8174]231540.000-0.0759No
99POU2AF1POU class 2 homeobox associating factor 1 [Source:HGNC Symbol;Acc:HGNC:9211]238570.000-0.0949No
100MAGEC2MAGE family member C2 [Source:HGNC Symbol;Acc:HGNC:13574]241370.000-0.1025No
101PF4V1platelet factor 4 variant 1 [Source:HGNC Symbol;Acc:HGNC:8862]245640.000-0.1140No
102XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]247140.000-0.1180No
103PYYpeptide YY [Source:HGNC Symbol;Acc:HGNC:9748]249140.000-0.1234No
104RGRretinal G protein coupled receptor [Source:HGNC Symbol;Acc:HGNC:9990]253110.000-0.1341No
105RHDRh blood group D antigen [Source:HGNC Symbol;Acc:HGNC:10009]253200.000-0.1343No
106CACNG2calcium voltage-gated channel auxiliary subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:1406]254240.000-0.1371No
107SPINK1serine peptidase inhibitor Kazal type 1 [Source:HGNC Symbol;Acc:HGNC:11244]258090.000-0.1475No
108SARDHsarcosine dehydrogenase [Source:HGNC Symbol;Acc:HGNC:10536]258670.000-0.1491No
109TPTEtransmembrane phosphatase with tensin homology [Source:HGNC Symbol;Acc:HGNC:12023]260010.000-0.1527No
110P2RY11purinergic receptor P2Y11 [Source:HGNC Symbol;Acc:HGNC:8540]263650.000-0.1625No
111SLC16A4solute carrier family 16 member 4 [Source:HGNC Symbol;Acc:HGNC:10925]263880.000-0.1631No
112SLC15A2solute carrier family 15 member 2 [Source:HGNC Symbol;Acc:HGNC:10921]268460.000-0.1755No
113INSL3insulin like 3 [Source:HGNC Symbol;Acc:HGNC:6086]268890.000-0.1766No
114INSL4insulin like 4 [Source:HGNC Symbol;Acc:HGNC:6087]268920.000-0.1766No
115KRT31keratin 31 [Source:HGNC Symbol;Acc:HGNC:6448]269900.000-0.1793No
116KRT14keratin 14 [Source:HGNC Symbol;Acc:HGNC:6416]270360.000-0.1805No
117H1-6H1.6 linker histone, cluster member [Source:HGNC Symbol;Acc:HGNC:4720]278720.000-0.2031No
118CTLA4cytotoxic T-lymphocyte associated protein 4 [Source:HGNC Symbol;Acc:HGNC:2505]278890.000-0.2035No
119RORCRAR related orphan receptor C [Source:HGNC Symbol;Acc:HGNC:10260]279220.000-0.2044No
120CD5LCD5 molecule like [Source:HGNC Symbol;Acc:HGNC:1690]281700.000-0.2111No
121CD69CD69 molecule [Source:HGNC Symbol;Acc:HGNC:1694]282210.000-0.2124No
122INPP5Dinositol polyphosphate-5-phosphatase D [Source:HGNC Symbol;Acc:HGNC:6079]29153-0.163-0.2362No
123RELBRELB proto-oncogene, NF-kB subunit [Source:HGNC Symbol;Acc:HGNC:9956]29190-0.174-0.2356No
124CNOT9CCR4-NOT transcription complex subunit 9 [Source:HGNC Symbol;Acc:HGNC:10445]29899-0.331-0.2517No
125NF1neurofibromin 1 [Source:HGNC Symbol;Acc:HGNC:7765]30079-0.374-0.2532No
126CLEC1AC-type lectin domain family 1 member A [Source:HGNC Symbol;Acc:HGNC:24355]31284-0.698-0.2794No
127TDRKHtudor and KH domain containing [Source:HGNC Symbol;Acc:HGNC:11713]32400-1.042-0.3001No
128BAXBCL2 associated X, apoptosis regulator [Source:HGNC Symbol;Acc:HGNC:959]32487-1.077-0.2927No
129RFX2regulatory factor X2 [Source:HGNC Symbol;Acc:HGNC:9983]32563-1.106-0.2847No
130H6PDhexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase [Source:HGNC Symbol;Acc:HGNC:4795]32737-1.161-0.2788No
131MMP17matrix metallopeptidase 17 [Source:HGNC Symbol;Acc:HGNC:7163]33093-1.291-0.2767No
132SLASrc like adaptor [Source:HGNC Symbol;Acc:HGNC:10902]33357-1.400-0.2711No
133DPF1double PHD fingers 1 [Source:HGNC Symbol;Acc:HGNC:20225]33738-1.489-0.2679No
134FZD9frizzled class receptor 9 [Source:HGNC Symbol;Acc:HGNC:4047]33808-1.522-0.2559No
135EML3EMAP like 3 [Source:HGNC Symbol;Acc:HGNC:26666]33928-1.576-0.2448No
136TP53tumor protein p53 [Source:HGNC Symbol;Acc:HGNC:11998]33950-1.588-0.2310No
137CD68CD68 molecule [Source:HGNC Symbol;Acc:HGNC:1693]34068-1.651-0.2192No
138ANGPTL4angiopoietin like 4 [Source:HGNC Symbol;Acc:HGNC:16039]34527-1.879-0.2145No
139PIDD1p53-induced death domain protein 1 [Source:HGNC Symbol;Acc:HGNC:16491]34589-1.916-0.1987No
140H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]35141-2.278-0.1930No
141PRRG3proline rich and Gla domain 3 [Source:HGNC Symbol;Acc:HGNC:30798]35291-2.316-0.1760No
142ETV5ETS variant transcription factor 5 [Source:HGNC Symbol;Acc:HGNC:3494]35885-2.834-0.1663No
143NFIXnuclear factor I X [Source:HGNC Symbol;Acc:HGNC:7788]36270-3.197-0.1477No
144TFAP4transcription factor AP-4 [Source:HGNC Symbol;Acc:HGNC:11745]36352-3.326-0.1197No
145RND2Rho family GTPase 2 [Source:HGNC Symbol;Acc:HGNC:18315]36442-3.442-0.0908No
146GALK1galactokinase 1 [Source:HGNC Symbol;Acc:HGNC:4118]36539-3.558-0.0611No
147ALOX5AParachidonate 5-lipoxygenase activating protein [Source:HGNC Symbol;Acc:HGNC:436]36652-3.729-0.0303No
148POU6F1POU class 6 homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9224]37020-4.6380.0019No
Table: GSEA details [plain text format]



Fig 2: P53_DN.V2_UP   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: P53_DN.V2_UP: Random ES distribution   
Gene set null distribution of ES for P53_DN.V2_UP