Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetZHONG_PFC_C2_UNKNOWN_NPC
Enrichment Score (ES)-0.8225476
Normalized Enrichment Score (NES)-1.6909673
Nominal p-value0.0
FDR q-value1.2874251E-4
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: ZHONG_PFC_C2_UNKNOWN_NPC   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1CKS2CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:2000]28370.990-0.0688No
2CNOT7CCR4-NOT transcription complex subunit 7 [Source:HGNC Symbol;Acc:HGNC:14101]35020.735-0.0809No
3FAM83Dfamily with sequence similarity 83 member D [Source:HGNC Symbol;Acc:HGNC:16122]54180.239-0.1308No
4CALB2calbindin 2 [Source:HGNC Symbol;Acc:HGNC:1435]88820.000-0.2243No
5AC091057.1OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637]128270.000-0.3309No
6NDST4N-deacetylase and N-sulfotransferase 4 [Source:HGNC Symbol;Acc:HGNC:20779]135680.000-0.3509No
7AMBNameloblastin [Source:HGNC Symbol;Acc:HGNC:452]217670.000-0.5723No
8MFAP2microfibril associated protein 2 [Source:HGNC Symbol;Acc:HGNC:7033]228540.000-0.6017No
9ZNF649zinc finger protein 649 [Source:HGNC Symbol;Acc:HGNC:25741]264180.000-0.6979No
10KDM4Alysine demethylase 4A [Source:HGNC Symbol;Acc:HGNC:22978]28540-0.006-0.7552No
11ITCHitchy E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:13890]28642-0.032-0.7577No
12TUBB6tubulin beta 6 class V [Source:HGNC Symbol;Acc:HGNC:20776]28717-0.052-0.7593No
13PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]30002-0.356-0.7911No
14KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]30165-0.400-0.7923No
15G2E3G2/M-phase specific E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:HGNC:20338]30301-0.433-0.7926No
16OIP5Opa interacting protein 5 [Source:HGNC Symbol;Acc:HGNC:20300]31183-0.669-0.8111No
17TUBB4Btubulin beta 4B class IVb [Source:HGNC Symbol;Acc:HGNC:20771]31219-0.678-0.8066No
18DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]31388-0.729-0.8054No
19ARHGAP11ARho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783]31643-0.782-0.8061No
20CENPEcentromere protein E [Source:HGNC Symbol;Acc:HGNC:1856]32254-1.006-0.8146Yes
21CKAP2Lcytoskeleton associated protein 2 like [Source:HGNC Symbol;Acc:HGNC:26877]32271-1.013-0.8070Yes
22MZT1mitotic spindle organizing protein 1 [Source:HGNC Symbol;Acc:HGNC:33830]32360-1.030-0.8012Yes
23TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]32370-1.033-0.7933Yes
24TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]32541-1.098-0.7892Yes
25TRIM59tripartite motif containing 59 [Source:HGNC Symbol;Acc:HGNC:30834]32585-1.113-0.7815Yes
26KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]32716-1.154-0.7759Yes
27REEP4receptor accessory protein 4 [Source:HGNC Symbol;Acc:HGNC:26176]32827-1.191-0.7694Yes
28AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]33083-1.285-0.7661Yes
29CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]33194-1.331-0.7586Yes
30CEP70centrosomal protein 70 [Source:HGNC Symbol;Acc:HGNC:29972]33203-1.334-0.7482Yes
31HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]33207-1.335-0.7377Yes
32ARL6IP1ADP ribosylation factor like GTPase 6 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:697]33324-1.384-0.7299Yes
33CDCA8cell division cycle associated 8 [Source:HGNC Symbol;Acc:HGNC:14629]33571-1.451-0.7250Yes
34TROAPtrophinin associated protein [Source:HGNC Symbol;Acc:HGNC:12327]33678-1.467-0.7163Yes
35CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]33722-1.484-0.7057Yes
36PIF1PIF1 5'-to-3' DNA helicase [Source:HGNC Symbol;Acc:HGNC:26220]33731-1.487-0.6941Yes
37LDHAlactate dehydrogenase A [Source:HGNC Symbol;Acc:HGNC:6535]33841-1.535-0.6849Yes
38PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]33895-1.555-0.6740Yes
39RANGAP1Ran GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9854]33988-1.610-0.6638Yes
40CDKN3cyclin dependent kinase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:1791]33991-1.612-0.6510Yes
41DNALI1dynein axonemal light intermediate chain 1 [Source:HGNC Symbol;Acc:HGNC:14353]34158-1.693-0.6421Yes
42MIS18BP1MIS18 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:20190]34184-1.710-0.6293Yes
43KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]34210-1.718-0.6163Yes
44UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]34312-1.770-0.6050Yes
45SPAG5sperm associated antigen 5 [Source:HGNC Symbol;Acc:HGNC:13452]34343-1.784-0.5917Yes
46TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]34662-1.944-0.5849Yes
47TUBA1Ctubulin alpha 1c [Source:HGNC Symbol;Acc:HGNC:20768]34865-2.088-0.5738Yes
48NDC80NDC80 kinetochore complex component [Source:HGNC Symbol;Acc:HGNC:16909]34879-2.099-0.5576Yes
49PRR11proline rich 11 [Source:HGNC Symbol;Acc:HGNC:25619]35002-2.171-0.5437Yes
50KIF22kinesin family member 22 [Source:HGNC Symbol;Acc:HGNC:6391]35069-2.220-0.5278Yes
51NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]35078-2.229-0.5104Yes
52CITcitron rho-interacting serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1985]35154-2.290-0.4943Yes
53TTKTTK protein kinase [Source:HGNC Symbol;Acc:HGNC:12401]35185-2.308-0.4768Yes
54KIF4Akinesin family member 4A [Source:HGNC Symbol;Acc:HGNC:13339]35370-2.370-0.4630Yes
55NDE1nudE neurodevelopment protein 1 [Source:HGNC Symbol;Acc:HGNC:17619]35392-2.388-0.4447Yes
56AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]35466-2.446-0.4273Yes
57DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35576-2.541-0.4101Yes
58CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]35581-2.547-0.3900Yes
59CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]35611-2.573-0.3704Yes
60MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]35643-2.607-0.3506Yes
61ASPMassembly factor for spindle microtubules [Source:HGNC Symbol;Acc:HGNC:19048]35708-2.647-0.3314Yes
62RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]35725-2.658-0.3108Yes
63CDCA2cell division cycle associated 2 [Source:HGNC Symbol;Acc:HGNC:14623]35809-2.746-0.2913Yes
64NEK2NIMA related kinase 2 [Source:HGNC Symbol;Acc:HGNC:7745]35837-2.768-0.2701Yes
65DCXRdicarbonyl and L-xylulose reductase [Source:HGNC Symbol;Acc:HGNC:18985]35848-2.786-0.2483Yes
66CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]35850-2.788-0.2262Yes
67SGO2shugoshin 2 [Source:HGNC Symbol;Acc:HGNC:30812]35873-2.813-0.2045Yes
68CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]35994-2.919-0.1846Yes
69NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36053-2.978-0.1626Yes
70GTSE1G2 and S-phase expressed 1 [Source:HGNC Symbol;Acc:HGNC:13698]36078-3.003-0.1395Yes
71PHF19PHD finger protein 19 [Source:HGNC Symbol;Acc:HGNC:24566]36096-3.032-0.1159Yes
72SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]36126-3.073-0.0924Yes
73CDC25Bcell division cycle 25B [Source:HGNC Symbol;Acc:HGNC:1726]36311-3.256-0.0715Yes
74KNSTRNkinetochore localized astrin (SPAG5) binding protein [Source:HGNC Symbol;Acc:HGNC:30767]36395-3.379-0.0470Yes
75NEIL3nei like DNA glycosylase 3 [Source:HGNC Symbol;Acc:HGNC:24573]36775-3.954-0.0259Yes
76PSRC1proline and serine rich coiled-coil 1 [Source:HGNC Symbol;Acc:HGNC:24472]36942-4.3470.0040Yes
Table: GSEA details [plain text format]



Fig 2: ZHONG_PFC_C2_UNKNOWN_NPC   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ZHONG_PFC_C2_UNKNOWN_NPC: Random ES distribution   
Gene set null distribution of ES for ZHONG_PFC_C2_UNKNOWN_NPC