Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_GAQ_versus_KO_NA.Nof1.cls #KO_GAQ_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_GAQ_versus_KO_NA_repos |
| Upregulated in class | KO_GAQ |
| GeneSet | HALLMARK_ANGIOGENESIS |
| Enrichment Score (ES) | 0.4375649 |
| Normalized Enrichment Score (NES) | 0.93137854 |
| Nominal p-value | 0.5093633 |
| FDR q-value | 0.81091934 |
| FWER p-Value | 0.995 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | TIMP1 | TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820] | 123 | 4.245 | 0.1428 | Yes |
| 2 | ITGAV | integrin subunit alpha V [Source:HGNC Symbol;Acc:HGNC:6150] | 466 | 3.017 | 0.2374 | Yes |
| 3 | SPP1 | secreted phosphoprotein 1 [Source:HGNC Symbol;Acc:HGNC:11255] | 493 | 2.954 | 0.3384 | Yes |
| 4 | PDGFA | platelet derived growth factor subunit A [Source:HGNC Symbol;Acc:HGNC:8799] | 518 | 2.899 | 0.4376 | Yes |
| 5 | LPL | lipoprotein lipase [Source:HGNC Symbol;Acc:HGNC:6677] | 3198 | 0.844 | 0.3943 | No |
| 6 | CCND2 | cyclin D2 [Source:HGNC Symbol;Acc:HGNC:1583] | 3384 | 0.781 | 0.4162 | No |
| 7 | THBD | thrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784] | 5644 | 0.210 | 0.3624 | No |
| 8 | PTK2 | protein tyrosine kinase 2 [Source:HGNC Symbol;Acc:HGNC:9611] | 5705 | 0.188 | 0.3673 | No |
| 9 | APP | amyloid beta precursor protein [Source:HGNC Symbol;Acc:HGNC:620] | 6336 | 0.005 | 0.3505 | No |
| 10 | APOH | apolipoprotein H [Source:HGNC Symbol;Acc:HGNC:616] | 6880 | 0.000 | 0.3358 | No |
| 11 | FGFR1 | fibroblast growth factor receptor 1 [Source:HGNC Symbol;Acc:HGNC:3688] | 7233 | 0.000 | 0.3263 | No |
| 12 | TNFRSF21 | TNF receptor superfamily member 21 [Source:HGNC Symbol;Acc:HGNC:13469] | 9386 | 0.000 | 0.2682 | No |
| 13 | KCNJ8 | potassium inwardly rectifying channel subfamily J member 8 [Source:HGNC Symbol;Acc:HGNC:6269] | 9881 | 0.000 | 0.2549 | No |
| 14 | POSTN | periostin [Source:HGNC Symbol;Acc:HGNC:16953] | 10309 | 0.000 | 0.2434 | No |
| 15 | PRG2 | proteoglycan 2, pro eosinophil major basic protein [Source:HGNC Symbol;Acc:HGNC:9362] | 11637 | 0.000 | 0.2076 | No |
| 16 | MSX1 | msh homeobox 1 [Source:HGNC Symbol;Acc:HGNC:7391] | 12515 | 0.000 | 0.1839 | No |
| 17 | VTN | vitronectin [Source:HGNC Symbol;Acc:HGNC:12724] | 13305 | 0.000 | 0.1626 | No |
| 18 | OLR1 | oxidized low density lipoprotein receptor 1 [Source:HGNC Symbol;Acc:HGNC:8133] | 16762 | 0.000 | 0.0694 | No |
| 19 | SERPINA5 | serpin family A member 5 [Source:HGNC Symbol;Acc:HGNC:8723] | 17857 | 0.000 | 0.0398 | No |
| 20 | LUM | lumican [Source:HGNC Symbol;Acc:HGNC:6724] | 18842 | 0.000 | 0.0133 | No |
| 21 | CXCL6 | C-X-C motif chemokine ligand 6 [Source:HGNC Symbol;Acc:HGNC:10643] | 19548 | 0.000 | -0.0057 | No |
| 22 | COL3A1 | collagen type III alpha 1 chain [Source:HGNC Symbol;Acc:HGNC:2201] | 19737 | 0.000 | -0.0108 | No |
| 23 | SLCO2A1 | solute carrier organic anion transporter family member 2A1 [Source:HGNC Symbol;Acc:HGNC:10955] | 24017 | 0.000 | -0.1263 | No |
| 24 | PF4 | platelet factor 4 [Source:HGNC Symbol;Acc:HGNC:8861] | 24747 | 0.000 | -0.1460 | No |
| 25 | COL5A2 | collagen type V alpha 2 chain [Source:HGNC Symbol;Acc:HGNC:2210] | 25133 | 0.000 | -0.1564 | No |
| 26 | PGLYRP1 | peptidoglycan recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:8904] | 25636 | 0.000 | -0.1699 | No |
| 27 | FSTL1 | follistatin like 1 [Source:HGNC Symbol;Acc:HGNC:3972] | 26353 | 0.000 | -0.1892 | No |
| 28 | VEGFA | vascular endothelial growth factor A [Source:HGNC Symbol;Acc:HGNC:12680] | 29178 | -0.170 | -0.2596 | No |
| 29 | STC1 | stanniocalcin 1 [Source:HGNC Symbol;Acc:HGNC:11373] | 29326 | -0.203 | -0.2566 | No |
| 30 | LRPAP1 | LDL receptor related protein associated protein 1 [Source:HGNC Symbol;Acc:HGNC:6701] | 30523 | -0.491 | -0.2720 | No |
| 31 | VAV2 | vav guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:12658] | 30890 | -0.588 | -0.2616 | No |
| 32 | S100A4 | S100 calcium binding protein A4 [Source:HGNC Symbol;Acc:HGNC:10494] | 31400 | -0.732 | -0.2501 | No |
| 33 | JAG1 | jagged canonical Notch ligand 1 [Source:HGNC Symbol;Acc:HGNC:6188] | 34686 | -1.954 | -0.2715 | No |
| 34 | VCAN | versican [Source:HGNC Symbol;Acc:HGNC:2464] | 34958 | -2.145 | -0.2050 | No |
| 35 | NRP1 | neuropilin 1 [Source:HGNC Symbol;Acc:HGNC:8004] | 36095 | -3.029 | -0.1314 | No |
| 36 | JAG2 | jagged canonical Notch ligand 2 [Source:HGNC Symbol;Acc:HGNC:6189] | 37011 | -4.597 | 0.0021 | No |
