Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_GAQ
GeneSetHALLMARK_COAGULATION
Enrichment Score (ES)0.42963088
Normalized Enrichment Score (NES)1.1154785
Nominal p-value0.107913665
FDR q-value0.24697533
FWER p-Value0.658
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_COAGULATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]424.7860.0357Yes
2SERPINB2serpin family B member 2 [Source:HGNC Symbol;Acc:HGNC:8584]744.5520.0698Yes
3MAFFMAF bZIP transcription factor F [Source:HGNC Symbol;Acc:HGNC:6780]894.4520.1037Yes
4FURINfurin, paired basic amino acid cleaving enzyme [Source:HGNC Symbol;Acc:HGNC:8568]1144.2970.1361Yes
5TIMP1TIMP metallopeptidase inhibitor 1 [Source:HGNC Symbol;Acc:HGNC:11820]1234.2450.1685Yes
6PDGFBplatelet derived growth factor subunit B [Source:HGNC Symbol;Acc:HGNC:8800]1604.0870.1989Yes
7SERPINE1serpin family E member 1 [Source:HGNC Symbol;Acc:HGNC:8583]1734.0080.2294Yes
8CFBcomplement factor B [Source:HGNC Symbol;Acc:HGNC:1037]2613.6370.2550Yes
9F9coagulation factor IX [Source:HGNC Symbol;Acc:HGNC:3551]2933.5360.2814Yes
10MMP14matrix metallopeptidase 14 [Source:HGNC Symbol;Acc:HGNC:7160]5272.8760.2972Yes
11PLEKpleckstrin [Source:HGNC Symbol;Acc:HGNC:9070]6042.6880.3158Yes
12DUSP14dual specificity phosphatase 14 [Source:HGNC Symbol;Acc:HGNC:17007]6162.6750.3361Yes
13SERPINC1serpin family C member 1 [Source:HGNC Symbol;Acc:HGNC:775]6562.6750.3556Yes
14MMP2matrix metallopeptidase 2 [Source:HGNC Symbol;Acc:HGNC:7166]7792.4570.3712Yes
15WDR1WD repeat domain 1 [Source:HGNC Symbol;Acc:HGNC:12754]8982.2900.3856Yes
16FBN1fibrillin 1 [Source:HGNC Symbol;Acc:HGNC:3603]9792.1810.4002Yes
17GNG12G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663]15471.6670.3977Yes
18THBS1thrombospondin 1 [Source:HGNC Symbol;Acc:HGNC:11785]16151.6180.4083Yes
19ANXA1annexin A1 [Source:HGNC Symbol;Acc:HGNC:533]20801.3040.4058Yes
20FYNFYN proto-oncogene, Src family tyrosine kinase [Source:HGNC Symbol;Acc:HGNC:4037]23421.2020.4080Yes
21GDAguanine deaminase [Source:HGNC Symbol;Acc:HGNC:4212]24491.1480.4139Yes
22CD9CD9 molecule [Source:HGNC Symbol;Acc:HGNC:1709]25501.1110.4198Yes
23APOA1apolipoprotein A1 [Source:HGNC Symbol;Acc:HGNC:600]29080.9550.4174Yes
24ADAM9ADAM metallopeptidase domain 9 [Source:HGNC Symbol;Acc:HGNC:216]29950.9270.4222Yes
25CTSKcathepsin K [Source:HGNC Symbol;Acc:HGNC:2536]30670.8980.4272Yes
26ITGB3integrin subunit beta 3 [Source:HGNC Symbol;Acc:HGNC:6156]32520.8240.4286Yes
27KLF7Kruppel like factor 7 [Source:HGNC Symbol;Acc:HGNC:6350]34310.7620.4296Yes
28CTSVcathepsin V [Source:HGNC Symbol;Acc:HGNC:2538]37120.6710.4272No
29F10coagulation factor X [Source:HGNC Symbol;Acc:HGNC:3528]39020.6050.4267No
30ITIH1inter-alpha-trypsin inhibitor heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:6166]40020.5770.4285No
31PREPprolyl endopeptidase [Source:HGNC Symbol;Acc:HGNC:9358]41750.5260.4279No
32S100A13S100 calcium binding protein A13 [Source:HGNC Symbol;Acc:HGNC:10490]43740.4710.4262No
33RABIFRAB interacting factor [Source:HGNC Symbol;Acc:HGNC:9797]46040.4050.4231No
34BMP1bone morphogenetic protein 1 [Source:HGNC Symbol;Acc:HGNC:1067]47000.3740.4234No
35CTSHcathepsin H [Source:HGNC Symbol;Acc:HGNC:2535]52310.2390.4109No
36CPN1carboxypeptidase N subunit 1 [Source:HGNC Symbol;Acc:HGNC:2312]55170.2390.4050No
37GNB2G protein subunit beta 2 [Source:HGNC Symbol;Acc:HGNC:4398]55870.2290.4049No
38THBDthrombomodulin [Source:HGNC Symbol;Acc:HGNC:11784]56440.2100.4050No
39SH2B2SH2B adaptor protein 2 [Source:HGNC Symbol;Acc:HGNC:17381]57500.1740.4035No
40ARF4ADP ribosylation factor 4 [Source:HGNC Symbol;Acc:HGNC:655]58980.1310.4005No
41RAPGEF3Rap guanine nucleotide exchange factor 3 [Source:HGNC Symbol;Acc:HGNC:16629]67110.0000.3785No
42PLATplasminogen activator, tissue type [Source:HGNC Symbol;Acc:HGNC:9051]99650.0000.2905No
43APOC3apolipoprotein C3 [Source:HGNC Symbol;Acc:HGNC:610]102000.0000.2842No
44APOC2apolipoprotein C2 [Source:HGNC Symbol;Acc:HGNC:609]102020.0000.2842No
45APOC1apolipoprotein C1 [Source:HGNC Symbol;Acc:HGNC:607]102030.0000.2842No
46F13Bcoagulation factor XIII B chain [Source:HGNC Symbol;Acc:HGNC:3534]109480.0000.2640No
47KLKB1kallikrein B1 [Source:HGNC Symbol;Acc:HGNC:6371]112340.0000.2563No
48TMPRSS6transmembrane serine protease 6 [Source:HGNC Symbol;Acc:HGNC:16517]116570.0000.2449No
49PROZprotein Z, vitamin K dependent plasma glycoprotein [Source:HGNC Symbol;Acc:HGNC:9460]117050.0000.2436No
50PROCprotein C, inactivator of coagulation factors Va and VIIIa [Source:HGNC Symbol;Acc:HGNC:9451]117230.0000.2432No
51P2RY1purinergic receptor P2Y1 [Source:HGNC Symbol;Acc:HGNC:8539]141870.0000.1765No
52MBL2mannose binding lectin 2 [Source:HGNC Symbol;Acc:HGNC:6922]155850.0000.1387No
53C1Scomplement C1s [Source:HGNC Symbol;Acc:HGNC:1247]155940.0000.1385No
54C8Bcomplement C8 beta chain [Source:HGNC Symbol;Acc:HGNC:1353]156540.0000.1369No
55C8Acomplement C8 alpha chain [Source:HGNC Symbol;Acc:HGNC:1352]156550.0000.1369No
56C8Gcomplement C8 gamma chain [Source:HGNC Symbol;Acc:HGNC:1354]156570.0000.1369No
57HTRA1HtrA serine peptidase 1 [Source:HGNC Symbol;Acc:HGNC:9476]156810.0000.1362No
58CFDcomplement factor D [Source:HGNC Symbol;Acc:HGNC:2771]157610.0000.1341No
59CFIcomplement factor I [Source:HGNC Symbol;Acc:HGNC:5394]157620.0000.1341No
60DCTdopachrome tautomerase [Source:HGNC Symbol;Acc:HGNC:2709]160260.0000.1270No
61C2complement C2 [Source:HGNC Symbol;Acc:HGNC:1248]161010.0000.1250No
62C9complement C9 [Source:HGNC Symbol;Acc:HGNC:1358]161060.0000.1249No
63F2coagulation factor II, thrombin [Source:HGNC Symbol;Acc:HGNC:3535]161500.0000.1237No
64TFtransferrin [Source:HGNC Symbol;Acc:HGNC:11740]162700.0000.1205No
65F12coagulation factor XII [Source:HGNC Symbol;Acc:HGNC:3530]164710.0000.1151No
66F11coagulation factor XI [Source:HGNC Symbol;Acc:HGNC:3529]164720.0000.1151No
67FGAfibrinogen alpha chain [Source:HGNC Symbol;Acc:HGNC:3661]167070.0000.1088No
68FGGfibrinogen gamma chain [Source:HGNC Symbol;Acc:HGNC:3694]167080.0000.1088No
69OLR1oxidized low density lipoprotein receptor 1 [Source:HGNC Symbol;Acc:HGNC:8133]167620.0000.1073No
70GP9glycoprotein IX platelet [Source:HGNC Symbol;Acc:HGNC:4444]171640.0000.0965No
71TIMP3TIMP metallopeptidase inhibitor 3 [Source:HGNC Symbol;Acc:HGNC:11822]171760.0000.0962No
72HRGhistidine rich glycoprotein [Source:HGNC Symbol;Acc:HGNC:5181]175300.0000.0866No
73HNF4Ahepatocyte nuclear factor 4 alpha [Source:HGNC Symbol;Acc:HGNC:5024]177090.0000.0818No
74SERPING1serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]178350.0000.0784No
75SERPINA1serpin family A member 1 [Source:HGNC Symbol;Acc:HGNC:8941]178500.0000.0780No
76DPP4dipeptidyl peptidase 4 [Source:HGNC Symbol;Acc:HGNC:3009]180030.0000.0739No
77MMP7matrix metallopeptidase 7 [Source:HGNC Symbol;Acc:HGNC:7174]191960.0000.0417No
78MMP1matrix metallopeptidase 1 [Source:HGNC Symbol;Acc:HGNC:7155]191990.0000.0416No
79MMP3matrix metallopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:7173]192030.0000.0415No
80MMP8matrix metallopeptidase 8 [Source:HGNC Symbol;Acc:HGNC:7175]192090.0000.0414No
81ACOX2acyl-CoA oxidase 2 [Source:HGNC Symbol;Acc:HGNC:120]201730.0000.0153No
82MEP1Ameprin A subunit alpha [Source:HGNC Symbol;Acc:HGNC:7015]203620.0000.0103No
83GP1BAglycoprotein Ib platelet subunit alpha [Source:HGNC Symbol;Acc:HGNC:4439]204270.0000.0085No
84CPB2carboxypeptidase B2 [Source:HGNC Symbol;Acc:HGNC:2300]206240.0000.0032No
85TFPI2tissue factor pathway inhibitor 2 [Source:HGNC Symbol;Acc:HGNC:11761]221730.000-0.0387No
86PRSS23serine protease 23 [Source:HGNC Symbol;Acc:HGNC:14370]224550.000-0.0463No
87ITGA2integrin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6137]238360.000-0.0836No
88A2Malpha-2-macroglobulin [Source:HGNC Symbol;Acc:HGNC:7]244250.000-0.0995No
89PF4platelet factor 4 [Source:HGNC Symbol;Acc:HGNC:8861]247470.000-0.1082No
90HMGCS23-hydroxy-3-methylglutaryl-CoA synthase 2 [Source:HGNC Symbol;Acc:HGNC:5008]247890.000-0.1093No
91PLGplasminogen [Source:HGNC Symbol;Acc:HGNC:9071]248230.000-0.1102No
92C1QAcomplement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]248800.000-0.1117No
93LEFTY2left-right determination factor 2 [Source:HGNC Symbol;Acc:HGNC:3122]250000.000-0.1150No
94RGNregucalcin [Source:HGNC Symbol;Acc:HGNC:9989]253040.000-0.1232No
95KLK8kallikrein related peptidase 8 [Source:HGNC Symbol;Acc:HGNC:6369]254590.000-0.1273No
96MMP10matrix metallopeptidase 10 [Source:HGNC Symbol;Acc:HGNC:7156]257030.000-0.1339No
97MMP11matrix metallopeptidase 11 [Source:HGNC Symbol;Acc:HGNC:7157]257060.000-0.1340No
98F2RL2coagulation factor II thrombin receptor like 2 [Source:HGNC Symbol;Acc:HGNC:3539]261690.000-0.1465No
99SPARCsecreted protein acidic and cysteine rich [Source:HGNC Symbol;Acc:HGNC:11219]283650.000-0.2059No
100CTSOcathepsin O [Source:HGNC Symbol;Acc:HGNC:2542]28953-0.110-0.2209No
101MMP15matrix metallopeptidase 15 [Source:HGNC Symbol;Acc:HGNC:7161]29244-0.185-0.2273No
102PEF1penta-EF-hand domain containing 1 [Source:HGNC Symbol;Acc:HGNC:30009]29597-0.262-0.2348No
103RAC1Rac family small GTPase 1 [Source:HGNC Symbol;Acc:HGNC:9801]29893-0.330-0.2403No
104VWFvon Willebrand factor [Source:HGNC Symbol;Acc:HGNC:12726]29921-0.336-0.2384No
105LAMP2lysosomal associated membrane protein 2 [Source:HGNC Symbol;Acc:HGNC:6501]29960-0.344-0.2368No
106MST1macrophage stimulating 1 [Source:HGNC Symbol;Acc:HGNC:7380]30119-0.387-0.2381No
107SIRT2sirtuin 2 [Source:HGNC Symbol;Acc:HGNC:10886]30623-0.519-0.2477No
108HPNhepsin [Source:HGNC Symbol;Acc:HGNC:5155]31186-0.670-0.2578No
109C3complement C3 [Source:HGNC Symbol;Acc:HGNC:1318]31763-0.825-0.2670No
110USP11ubiquitin specific peptidase 11 [Source:HGNC Symbol;Acc:HGNC:12609]31770-0.828-0.2608No
111S100A1S100 calcium binding protein A1 [Source:HGNC Symbol;Acc:HGNC:10486]31995-0.911-0.2599No
112COMPcartilage oligomeric matrix protein [Source:HGNC Symbol;Acc:HGNC:2227]32003-0.914-0.2530No
113CTSBcathepsin B [Source:HGNC Symbol;Acc:HGNC:2527]32136-0.956-0.2493No
114CAPN2calpain 2 [Source:HGNC Symbol;Acc:HGNC:1479]32158-0.965-0.2424No
115CLUclusterin [Source:HGNC Symbol;Acc:HGNC:2095]32657-1.134-0.2472No
116FN1fibronectin 1 [Source:HGNC Symbol;Acc:HGNC:3778]32727-1.158-0.2401No
117F3coagulation factor III, tissue factor [Source:HGNC Symbol;Acc:HGNC:3541]32848-1.199-0.2342No
118ISCUiron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]33366-1.404-0.2374No
119MASP2mannan binding lectin serine peptidase 2 [Source:HGNC Symbol;Acc:HGNC:6902]33455-1.448-0.2286No
120ANGangiogenin [Source:HGNC Symbol;Acc:HGNC:483]33579-1.451-0.2208No
121CTSEcathepsin E [Source:HGNC Symbol;Acc:HGNC:2530]33648-1.458-0.2114No
122LTA4Hleukotriene A4 hydrolase [Source:HGNC Symbol;Acc:HGNC:6710]33822-1.528-0.2043No
123CSRP1cysteine and glycine rich protein 1 [Source:HGNC Symbol;Acc:HGNC:2469]34020-1.630-0.1971No
124DUSP6dual specificity phosphatase 6 [Source:HGNC Symbol;Acc:HGNC:3072]34100-1.666-0.1865No
125CFHcomplement factor H [Source:HGNC Symbol;Acc:HGNC:4883]34353-1.788-0.1795No
126CASP9caspase 9 [Source:HGNC Symbol;Acc:HGNC:1511]34451-1.832-0.1681No
127C1Rcomplement C1r [Source:HGNC Symbol;Acc:HGNC:1246]34805-2.052-0.1619No
128LRP1LDL receptor related protein 1 [Source:HGNC Symbol;Acc:HGNC:6692]34833-2.074-0.1466No
129CRIP2cysteine rich protein 2 [Source:HGNC Symbol;Acc:HGNC:2361]34924-2.128-0.1327No
130MSRB2methionine sulfoxide reductase B2 [Source:HGNC Symbol;Acc:HGNC:17061]35164-2.299-0.1215No
131PROS1protein S [Source:HGNC Symbol;Acc:HGNC:9456]35659-2.608-0.1148No
132CAPN5calpain 5 [Source:HGNC Symbol;Acc:HGNC:1482]35696-2.632-0.0955No
133LGMNlegumain [Source:HGNC Symbol;Acc:HGNC:9472]35698-2.637-0.0753No
134GSNgelsolin [Source:HGNC Symbol;Acc:HGNC:4620]35954-2.875-0.0601No
135CPQcarboxypeptidase Q [Source:HGNC Symbol;Acc:HGNC:16910]36066-2.990-0.0401No
136PLAUplasminogen activator, urokinase [Source:HGNC Symbol;Acc:HGNC:9052]36751-3.911-0.0285No
137F8coagulation factor VIII [Source:HGNC Symbol;Acc:HGNC:3546]37071-4.9010.0005No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_COAGULATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_COAGULATION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_COAGULATION