Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_GAQ_versus_KO_NA.Nof1.cls
#KO_GAQ_versus_KO_NA_repos
PhenotypeNof1.cls#KO_GAQ_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetHALLMARK_PEROXISOME
Enrichment Score (ES)-0.6343711
Normalized Enrichment Score (NES)-1.3583055
Nominal p-value0.018757327
FDR q-value0.08641082
FWER p-Value0.464
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_PEROXISOME   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1ATXN1ataxin 1 [Source:HGNC Symbol;Acc:HGNC:10548]3133.4870.0184No
2ERCC1ERCC excision repair 1, endonuclease non-catalytic subunit [Source:HGNC Symbol;Acc:HGNC:3433]3433.4030.0439No
3SOD2superoxide dismutase 2 [Source:HGNC Symbol;Acc:HGNC:11180]4972.9450.0624No
4ACSL4acyl-CoA synthetase long chain family member 4 [Source:HGNC Symbol;Acc:HGNC:3571]9072.2780.0689No
5PRDX5peroxiredoxin 5 [Source:HGNC Symbol;Acc:HGNC:9355]17481.5210.0579No
6CDK7cyclin dependent kinase 7 [Source:HGNC Symbol;Acc:HGNC:1778]18571.4560.0662No
7SLC25A19solute carrier family 25 member 19 [Source:HGNC Symbol;Acc:HGNC:14409]23331.2080.0627No
8CNBPCCHC-type zinc finger nucleic acid binding protein [Source:HGNC Symbol;Acc:HGNC:13164]23351.2070.0720No
9PRDX1peroxiredoxin 1 [Source:HGNC Symbol;Acc:HGNC:9352]24411.1510.0780No
10CRABP2cellular retinoic acid binding protein 2 [Source:HGNC Symbol;Acc:HGNC:2339]24551.1450.0865No
11YWHAHtyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta [Source:HGNC Symbol;Acc:HGNC:12853]28480.9860.0835No
12ACOX1acyl-CoA oxidase 1 [Source:HGNC Symbol;Acc:HGNC:119]30380.9100.0854No
13DHRS3dehydrogenase/reductase 3 [Source:HGNC Symbol;Acc:HGNC:17693]31400.8650.0893No
14VPS4Bvacuolar protein sorting 4 homolog B [Source:HGNC Symbol;Acc:HGNC:10895]35580.7150.0836No
15BCL10BCL10 immune signaling adaptor [Source:HGNC Symbol;Acc:HGNC:989]40710.5590.0740No
16TSPOtranslocator protein [Source:HGNC Symbol;Acc:HGNC:1158]41870.5230.0749No
17IDI1isopentenyl-diphosphate delta isomerase 1 [Source:HGNC Symbol;Acc:HGNC:5387]42570.5000.0769No
18HRASHRas proto-oncogene, GTPase [Source:HGNC Symbol;Acc:HGNC:5173]46770.3800.0685No
19PEX5peroxisomal biogenesis factor 5 [Source:HGNC Symbol;Acc:HGNC:9719]47920.3460.0681No
20PEX11Aperoxisomal biogenesis factor 11 alpha [Source:HGNC Symbol;Acc:HGNC:8852]48070.3430.0704No
21SEMA3Csemaphorin 3C [Source:HGNC Symbol;Acc:HGNC:10725]48780.3220.0710No
22PABPC1poly(A) binding protein cytoplasmic 1 [Source:HGNC Symbol;Acc:HGNC:8554]49720.2980.0708No
23NUDT19nudix hydrolase 19 [Source:HGNC Symbol;Acc:HGNC:32036]54120.2390.0607No
24EPHX2epoxide hydrolase 2 [Source:HGNC Symbol;Acc:HGNC:3402]80250.000-0.0099No
25EHHADHenoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3247]80430.000-0.0103No
26GSTK1glutathione S-transferase kappa 1 [Source:HGNC Symbol;Acc:HGNC:16906]96900.000-0.0549No
27SLC27A2solute carrier family 27 member 2 [Source:HGNC Symbol;Acc:HGNC:10996]110010.000-0.0903No
28ESR2estrogen receptor 2 [Source:HGNC Symbol;Acc:HGNC:3468]120860.000-0.1196No
29STSsteroid sulfatase [Source:HGNC Symbol;Acc:HGNC:11425]124450.000-0.1293No
30TTRtransthyretin [Source:HGNC Symbol;Acc:HGNC:12405]127160.000-0.1366No
31HSD11B2hydroxysteroid 11-beta dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:5209]144780.000-0.1842No
32CELcarboxyl ester lipase [Source:HGNC Symbol;Acc:HGNC:1848]157520.000-0.2186No
33DIO1iodothyronine deiodinase 1 [Source:HGNC Symbol;Acc:HGNC:2883]158150.000-0.2203No
34SERPINA6serpin family A member 6 [Source:HGNC Symbol;Acc:HGNC:1540]178540.000-0.2754No
35UGT2B17UDP glucuronosyltransferase family 2 member B17 [Source:HGNC Symbol;Acc:HGNC:12547]182540.000-0.2861No
36NR1I2nuclear receptor subfamily 1 group I member 2 [Source:HGNC Symbol;Acc:HGNC:7968]200720.000-0.3353No
37SULT2B1sulfotransferase family 2B member 1 [Source:HGNC Symbol;Acc:HGNC:11459]209000.000-0.3576No
38CRABP1cellular retinoic acid binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2338]211910.000-0.3655No
39SCGB1A1secretoglobin family 1A member 1 [Source:HGNC Symbol;Acc:HGNC:12523]213850.000-0.3707No
40HAO2hydroxyacid oxidase 2 [Source:HGNC Symbol;Acc:HGNC:4810]220830.000-0.3895No
41ALDH1A1aldehyde dehydrogenase 1 family member A1 [Source:HGNC Symbol;Acc:HGNC:402]230420.000-0.4154No
42FABP6fatty acid binding protein 6 [Source:HGNC Symbol;Acc:HGNC:3561]242920.000-0.4492No
43ALBalbumin [Source:HGNC Symbol;Acc:HGNC:399]247120.000-0.4605No
44ABCC8ATP binding cassette subfamily C member 8 [Source:HGNC Symbol;Acc:HGNC:59]285040.000-0.5630No
45CTBP1C-terminal binding protein 1 [Source:HGNC Symbol;Acc:HGNC:2494]28563-0.011-0.5645No
46PEX13peroxisomal biogenesis factor 13 [Source:HGNC Symbol;Acc:HGNC:8855]28893-0.095-0.5727No
47SIAH1siah E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:10857]28894-0.095-0.5719No
48SOD1superoxide dismutase 1 [Source:HGNC Symbol;Acc:HGNC:11179]29201-0.176-0.5789No
49PEX14peroxisomal biogenesis factor 14 [Source:HGNC Symbol;Acc:HGNC:8856]29367-0.215-0.5817No
50ERCC3ERCC excision repair 3, TFIIH core complex helicase subunit [Source:HGNC Symbol;Acc:HGNC:3435]29708-0.292-0.5886No
51PEX2peroxisomal biogenesis factor 2 [Source:HGNC Symbol;Acc:HGNC:9717]29788-0.312-0.5883No
52FIS1fission, mitochondrial 1 [Source:HGNC Symbol;Acc:HGNC:21689]30056-0.367-0.5927No
53CLN8CLN8 transmembrane ER and ERGIC protein [Source:HGNC Symbol;Acc:HGNC:2079]30160-0.398-0.5924No
54SMARCC1SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [Source:HGNC Symbol;Acc:HGNC:11104]30288-0.430-0.5926No
55PEX6peroxisomal biogenesis factor 6 [Source:HGNC Symbol;Acc:HGNC:8859]30314-0.436-0.5899No
56ISOC1isochorismatase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:24254]30351-0.448-0.5874No
57MVPmajor vault protein [Source:HGNC Symbol;Acc:HGNC:7531]30391-0.460-0.5849No
58RXRGretinoid X receptor gamma [Source:HGNC Symbol;Acc:HGNC:10479]30479-0.479-0.5836No
59ACOT8acyl-CoA thioesterase 8 [Source:HGNC Symbol;Acc:HGNC:15919]31013-0.618-0.5932No
60ITGB1BP1integrin subunit beta 1 binding protein 1 [Source:HGNC Symbol;Acc:HGNC:23927]31218-0.677-0.5935No
61ECI2enoyl-CoA delta isomerase 2 [Source:HGNC Symbol;Acc:HGNC:14601]32730-1.159-0.6254Yes
62SLC23A2solute carrier family 23 member 2 [Source:HGNC Symbol;Acc:HGNC:10973]32756-1.167-0.6171Yes
63SLC25A17solute carrier family 25 member 17 [Source:HGNC Symbol;Acc:HGNC:10987]32786-1.177-0.6088Yes
64ACSL5acyl-CoA synthetase long chain family member 5 [Source:HGNC Symbol;Acc:HGNC:16526]32809-1.185-0.6003Yes
65IDEinsulin degrading enzyme [Source:HGNC Symbol;Acc:HGNC:5381]33086-1.287-0.5978Yes
66SLC25A4solute carrier family 25 member 4 [Source:HGNC Symbol;Acc:HGNC:10990]33238-1.352-0.5915Yes
67HSD17B11hydroxysteroid 17-beta dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:22960]33434-1.438-0.5857Yes
68HMGCL3-hydroxy-3-methylglutaryl-CoA lyase [Source:HGNC Symbol;Acc:HGNC:5005]33609-1.451-0.5792Yes
69LONP2lon peptidase 2, peroxisomal [Source:HGNC Symbol;Acc:HGNC:20598]33655-1.459-0.5692Yes
70RDH11retinol dehydrogenase 11 [Source:HGNC Symbol;Acc:HGNC:17964]33736-1.488-0.5599Yes
71ABCB9ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]33919-1.573-0.5527Yes
72RETSATretinol saturase [Source:HGNC Symbol;Acc:HGNC:25991]34084-1.659-0.5443Yes
73FDPSfarnesyl diphosphate synthase [Source:HGNC Symbol;Acc:HGNC:3631]34122-1.673-0.5324Yes
74ABCB1ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]34154-1.690-0.5202Yes
75ABCD3ATP binding cassette subfamily D member 3 [Source:HGNC Symbol;Acc:HGNC:67]34258-1.746-0.5096Yes
76CTPS1CTP synthase 1 [Source:HGNC Symbol;Acc:HGNC:2519]34397-1.805-0.4994Yes
77DLG4discs large MAGUK scaffold protein 4 [Source:HGNC Symbol;Acc:HGNC:2903]34410-1.812-0.4858Yes
78CRATcarnitine O-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:2342]34598-1.922-0.4760Yes
79MLYCDmalonyl-CoA decarboxylase [Source:HGNC Symbol;Acc:HGNC:7150]34614-1.931-0.4615Yes
80TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]34662-1.944-0.4478Yes
81GNPATglyceronephosphate O-acyltransferase [Source:HGNC Symbol;Acc:HGNC:4416]34950-2.142-0.4391Yes
82CATcatalase [Source:HGNC Symbol;Acc:HGNC:1516]35041-2.202-0.4245Yes
83CADM1cell adhesion molecule 1 [Source:HGNC Symbol;Acc:HGNC:5951]35328-2.329-0.4143Yes
84SCP2sterol carrier protein 2 [Source:HGNC Symbol;Acc:HGNC:10606]35337-2.336-0.3965Yes
85ACSL1acyl-CoA synthetase long chain family member 1 [Source:HGNC Symbol;Acc:HGNC:3569]35348-2.344-0.3787Yes
86ABCC5ATP binding cassette subfamily C member 5 [Source:HGNC Symbol;Acc:HGNC:56]35445-2.426-0.3626Yes
87ALDH9A1aldehyde dehydrogenase 9 family member A1 [Source:HGNC Symbol;Acc:HGNC:412]35485-2.466-0.3447Yes
88SLC35B2solute carrier family 35 member B2 [Source:HGNC Symbol;Acc:HGNC:16872]35489-2.468-0.3257Yes
89ABCB4ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]35490-2.469-0.3067Yes
90PEX11Bperoxisomal biogenesis factor 11 beta [Source:HGNC Symbol;Acc:HGNC:8853]35509-2.483-0.2881Yes
91IDH2isocitrate dehydrogenase (NADP(+)) 2 [Source:HGNC Symbol;Acc:HGNC:5383]35532-2.509-0.2693Yes
92CACNA1Bcalcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389]35647-2.608-0.2523Yes
93HSD17B4hydroxysteroid 17-beta dehydrogenase 4 [Source:HGNC Symbol;Acc:HGNC:5213]35691-2.624-0.2332Yes
94ELOVL5ELOVL fatty acid elongase 5 [Source:HGNC Symbol;Acc:HGNC:21308]35734-2.663-0.2139Yes
95FADS1fatty acid desaturase 1 [Source:HGNC Symbol;Acc:HGNC:3574]35774-2.709-0.1940Yes
96ACAA1acetyl-CoA acyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:82]35784-2.718-0.1733Yes
97HSD3B7hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 [Source:HGNC Symbol;Acc:HGNC:18324]35892-2.842-0.1543Yes
98ABCD1ATP binding cassette subfamily D member 1 [Source:HGNC Symbol;Acc:HGNC:61]36067-2.991-0.1360Yes
99ECH1enoyl-CoA hydratase 1 [Source:HGNC Symbol;Acc:HGNC:3149]36133-3.086-0.1140Yes
100DHCR2424-dehydrocholesterol reductase [Source:HGNC Symbol;Acc:HGNC:2859]36192-3.161-0.0912Yes
101ABCD2ATP binding cassette subfamily D member 2 [Source:HGNC Symbol;Acc:HGNC:66]36487-3.470-0.0724Yes
102MSH2mutS homolog 2 [Source:HGNC Symbol;Acc:HGNC:7325]36701-3.805-0.0488Yes
103CLN6CLN6 transmembrane ER protein [Source:HGNC Symbol;Acc:HGNC:2077]36709-3.830-0.0195Yes
104IDH1isocitrate dehydrogenase (NADP(+)) 1 [Source:HGNC Symbol;Acc:HGNC:5382]36725-3.8590.0099Yes
Table: GSEA details [plain text format]



Fig 2: HALLMARK_PEROXISOME   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HALLMARK_PEROXISOME: Random ES distribution   
Gene set null distribution of ES for HALLMARK_PEROXISOME