Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_NA |
| GeneSet | CHR15Q13 |
| Enrichment Score (ES) | -0.68310624 |
| Normalized Enrichment Score (NES) | -1.3691679 |
| Nominal p-value | 0.017667845 |
| FDR q-value | 0.4391457 |
| FWER p-Value | 0.977 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | RPL41P2 | ribosomal protein L41 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:10357] | 1242 | 2.075 | 0.0285 | No |
| 2 | MTMR10 | myotubularin related protein 10 [Source:HGNC Symbol;Acc:HGNC:25999] | 2288 | 1.255 | 0.0378 | No |
| 3 | PDCD6IPP2 | PDCD6IP pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:49873] | 2785 | 0.988 | 0.0540 | No |
| 4 | SCG5 | secretogranin V [Source:HGNC Symbol;Acc:HGNC:10816] | 6180 | 0.000 | -0.0377 | No |
| 5 | RN7SL238P | RNA, 7SL, cytoplasmic 238, pseudogene [Source:HGNC Symbol;Acc:HGNC:46254] | 6250 | 0.000 | -0.0396 | No |
| 6 | GREM1 | gremlin 1, DAN family BMP antagonist [Source:HGNC Symbol;Acc:HGNC:2001] | 7930 | 0.000 | -0.0850 | No |
| 7 | DNM1P50 | dynamin 1 pseudogene 50 [Source:HGNC Symbol;Acc:HGNC:48499] | 8676 | 0.000 | -0.1051 | No |
| 8 | DNM1P30 | dynamin 1 pseudogene 30 [Source:HGNC Symbol;Acc:HGNC:35177] | 8756 | 0.000 | -0.1072 | No |
| 9 | DNM1P28 | dynamin 1 pseudogene 28 [Source:HGNC Symbol;Acc:HGNC:35175] | 8772 | 0.000 | -0.1076 | No |
| 10 | DNM1P31 | dynamin 1 pseudogene 31 [Source:HGNC Symbol;Acc:HGNC:35178] | 8786 | 0.000 | -0.1080 | No |
| 11 | DNM1P32 | dynamin 1 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:35179] | 8787 | 0.000 | -0.1080 | No |
| 12 | HERC2P9 | hect domain and RLD 2 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:30495] | 10956 | 0.000 | -0.1666 | No |
| 13 | RYR3 | ryanodine receptor 3 [Source:HGNC Symbol;Acc:HGNC:10485] | 11677 | 0.000 | -0.1860 | No |
| 14 | RN7SL673P | RNA, 7SL, cytoplasmic 673, pseudogene [Source:HGNC Symbol;Acc:HGNC:46689] | 11822 | 0.000 | -0.1899 | No |
| 15 | GOLGA6L7 | golgin A6 family like 7 [Source:HGNC Symbol;Acc:HGNC:37442] | 12605 | 0.000 | -0.2110 | No |
| 16 | AC091057.1 | OTU deubiquitinase 7A pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:100288637] | 12629 | 0.000 | -0.2117 | No |
| 17 | CHRFAM7A | CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion [Source:HGNC Symbol;Acc:HGNC:15781] | 13031 | 0.000 | -0.2225 | No |
| 18 | TJP1 | tight junction protein 1 [Source:HGNC Symbol;Acc:HGNC:11827] | 13284 | 0.000 | -0.2293 | No |
| 19 | LINC02256 | long intergenic non-protein coding RNA 2256 [Source:HGNC Symbol;Acc:HGNC:53157] | 13681 | 0.000 | -0.2400 | No |
| 20 | LINC02249 | long intergenic non-protein coding RNA 2249 [Source:HGNC Symbol;Acc:HGNC:32351] | 13696 | 0.000 | -0.2404 | No |
| 21 | ULK4P1 | ULK4 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:15775] | 14365 | 0.000 | -0.2584 | No |
| 22 | ULK4P3 | ULK4 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:15777] | 14367 | 0.000 | -0.2584 | No |
| 23 | ULK4P2 | ULK4 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:15776] | 14368 | 0.000 | -0.2584 | No |
| 24 | TMCO5B | transmembrane and coiled-coil domains 5B (pseudogene) [Source:HGNC Symbol;Acc:HGNC:34243] | 14407 | 0.000 | -0.2595 | No |
| 25 | RN7SL185P | RNA, 7SL, cytoplasmic 185, pseudogene [Source:HGNC Symbol;Acc:HGNC:46201] | 14431 | 0.000 | -0.2601 | No |
| 26 | RN7SL196P | RNA, 7SL, cytoplasmic 196, pseudogene [Source:HGNC Symbol;Acc:HGNC:46212] | 14857 | 0.000 | -0.2716 | No |
| 27 | LINC02352 | long intergenic non-protein coding RNA 2352 [Source:HGNC Symbol;Acc:HGNC:53274] | 14959 | 0.000 | -0.2743 | No |
| 28 | GOLGA8UP | golgin A8 family member U, pseudogene [Source:HGNC Symbol;Acc:HGNC:44411] | 15078 | 0.000 | -0.2775 | No |
| 29 | HERC2P11 | hect domain and RLD 2 pseudogene 11 [Source:HGNC Symbol;Acc:HGNC:49882] | 15721 | 0.000 | -0.2948 | No |
| 30 | ABCB10P4 | ABCB10 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:31130] | 16115 | 0.000 | -0.3055 | No |
| 31 | ABCB10P3 | ABCB10 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:31129] | 16116 | 0.000 | -0.3055 | No |
| 32 | FAM189A1 | family with sequence similarity 189 member A1 [Source:HGNC Symbol;Acc:HGNC:29075] | 17284 | 0.000 | -0.3370 | No |
| 33 | RN7SL539P | RNA, 7SL, cytoplasmic 539, pseudogene [Source:HGNC Symbol;Acc:HGNC:46555] | 17619 | 0.000 | -0.3460 | No |
| 34 | RN7SL796P | RNA, 7SL, cytoplasmic 796, pseudogene [Source:HGNC Symbol;Acc:HGNC:46812] | 17720 | 0.000 | -0.3487 | No |
| 35 | MIR4509-3 | microRNA 4509-3 [Source:HGNC Symbol;Acc:HGNC:41610] | 19590 | 0.000 | -0.3992 | No |
| 36 | MIR4509-2 | microRNA 4509-2 [Source:HGNC Symbol;Acc:HGNC:41537] | 19591 | 0.000 | -0.3992 | No |
| 37 | AC012236.1 | uncharacterized LOC283710 [Source:NCBI gene (formerly Entrezgene);Acc:283710] | 20508 | 0.000 | -0.4240 | No |
| 38 | RN7SL286P | RNA, 7SL, cytoplasmic 286, pseudogene [Source:HGNC Symbol;Acc:HGNC:46302] | 20734 | 0.000 | -0.4300 | No |
| 39 | RN7SL469P | RNA, 7SL, cytoplasmic 469, pseudogene [Source:HGNC Symbol;Acc:HGNC:46485] | 21319 | 0.000 | -0.4458 | No |
| 40 | GOLGA8R | golgin A8 family member R [Source:HGNC Symbol;Acc:HGNC:44407] | 21473 | 0.000 | -0.4499 | No |
| 41 | GOLGA8T | golgin A8 family member T [Source:HGNC Symbol;Acc:HGNC:44410] | 21475 | 0.000 | -0.4500 | No |
| 42 | GOLGA8K | golgin A8 family member K [Source:HGNC Symbol;Acc:HGNC:38652] | 21478 | 0.000 | -0.4500 | No |
| 43 | GOLGA8J | golgin A8 family member J [Source:HGNC Symbol;Acc:HGNC:38650] | 21479 | 0.000 | -0.4500 | No |
| 44 | GOLGA8M | golgin A8 family member M [Source:HGNC Symbol;Acc:HGNC:44404] | 21480 | 0.000 | -0.4500 | No |
| 45 | GOLGA8O | golgin A8 family member O [Source:HGNC Symbol;Acc:HGNC:44406] | 21481 | 0.000 | -0.4500 | No |
| 46 | GOLGA8N | golgin A8 family member N [Source:HGNC Symbol;Acc:HGNC:44405] | 21482 | 0.000 | -0.4500 | No |
| 47 | GOLGA8Q | golgin A8 family member Q [Source:HGNC Symbol;Acc:HGNC:44408] | 21483 | 0.000 | -0.4500 | No |
| 48 | GOLGA8G | golgin A8 family member G [Source:HGNC Symbol;Acc:HGNC:25328] | 21486 | 0.000 | -0.4501 | No |
| 49 | GOLGA8F | golgin A8 family member F [Source:HGNC Symbol;Acc:HGNC:32378] | 21489 | 0.000 | -0.4501 | No |
| 50 | GOLGA8H | golgin A8 family member H [Source:HGNC Symbol;Acc:HGNC:37443] | 21490 | 0.000 | -0.4501 | No |
| 51 | CHRNA7 | cholinergic receptor nicotinic alpha 7 subunit [Source:HGNC Symbol;Acc:HGNC:1960] | 21736 | 0.000 | -0.4568 | No |
| 52 | HNRNPA1P71 | heterogeneous nuclear ribonucleoprotein A1 pseudogene 71 [Source:HGNC Symbol;Acc:HGNC:48801] | 22254 | 0.000 | -0.4707 | No |
| 53 | OCA2 | OCA2 melanosomal transmembrane protein [Source:HGNC Symbol;Acc:HGNC:8101] | 23149 | 0.000 | -0.4949 | No |
| 54 | AC022613.1 | novel transcript, antisense to TJP1 | 23252 | 0.000 | -0.4976 | No |
| 55 | RN7SL719P | RNA, 7SL, cytoplasmic 719, pseudogene [Source:HGNC Symbol;Acc:HGNC:46735] | 24006 | 0.000 | -0.5180 | No |
| 56 | RNU6-466P | RNA, U6 small nuclear 466, pseudogene [Source:HGNC Symbol;Acc:HGNC:47429] | 25311 | 0.000 | -0.5532 | No |
| 57 | RN7SL82P | RNA, 7SL, cytoplasmic 82, pseudogene [Source:HGNC Symbol;Acc:HGNC:46098] | 25355 | 0.000 | -0.5544 | No |
| 58 | MIR211 | microRNA 211 [Source:HGNC Symbol;Acc:HGNC:31588] | 25702 | 0.000 | -0.5637 | No |
| 59 | RN7SL628P | RNA, 7SL, cytoplasmic 628, pseudogene [Source:HGNC Symbol;Acc:HGNC:46644] | 26258 | 0.000 | -0.5787 | No |
| 60 | RNU6-18P | RNA, U6 small nuclear 18, pseudogene [Source:HGNC Symbol;Acc:HGNC:34262] | 27926 | 0.000 | -0.6237 | No |
| 61 | RNU6-17P | RNA, U6 small nuclear 17, pseudogene [Source:HGNC Symbol;Acc:HGNC:34261] | 27951 | 0.000 | -0.6244 | No |
| 62 | OTUD7A | OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718] | 28368 | -0.072 | -0.6335 | No |
| 63 | HERC2P10 | hect domain and RLD 2 pseudogene 10 [Source:HGNC Symbol;Acc:HGNC:39056] | 28823 | -0.189 | -0.6401 | No |
| 64 | FMN1 | formin 1 [Source:HGNC Symbol;Acc:HGNC:3768] | 30417 | -0.589 | -0.6655 | Yes |
| 65 | RPL5P32 | ribosomal protein L5 pseudogene 32 [Source:HGNC Symbol;Acc:HGNC:36973] | 30665 | -0.674 | -0.6520 | Yes |
| 66 | NSMCE3 | NSE3 homolog, SMC5-SMC6 complex component [Source:HGNC Symbol;Acc:HGNC:7677] | 31400 | -0.893 | -0.6451 | Yes |
| 67 | NCAPGP2 | non-SMC condensin I complex subunit G pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51905] | 32341 | -1.232 | -0.6336 | Yes |
| 68 | HMGN2P5 | high mobility group nucleosomal binding domain 2 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:33568] | 32408 | -1.232 | -0.5985 | Yes |
| 69 | WHAMMP2 | WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:32360] | 32494 | -1.232 | -0.5640 | Yes |
| 70 | HERC2 | HECT and RLD domain containing E3 ubiquitin protein ligase 2 [Source:HGNC Symbol;Acc:HGNC:4868] | 33094 | -1.489 | -0.5356 | Yes |
| 71 | KLF13 | Kruppel like factor 13 [Source:HGNC Symbol;Acc:HGNC:13672] | 33400 | -1.624 | -0.4953 | Yes |
| 72 | APBA2 | amyloid beta precursor protein binding family A member 2 [Source:HGNC Symbol;Acc:HGNC:579] | 34456 | -2.128 | -0.4601 | Yes |
| 73 | ARHGAP11B | Rho GTPase activating protein 11B [Source:HGNC Symbol;Acc:HGNC:15782] | 34882 | -2.408 | -0.3996 | Yes |
| 74 | TUBBP8 | tubulin beta class I pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:42179] | 35097 | -2.559 | -0.3288 | Yes |
| 75 | ARHGAP11A | Rho GTPase activating protein 11A [Source:HGNC Symbol;Acc:HGNC:15783] | 35522 | -2.864 | -0.2546 | Yes |
| 76 | FAN1 | FANCD2 and FANCI associated nuclease 1 [Source:HGNC Symbol;Acc:HGNC:29170] | 35716 | -3.055 | -0.1684 | Yes |
| 77 | UBE2CP4 | ubiquitin conjugating enzyme E2 C pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:43553] | 35970 | -3.323 | -0.0758 | Yes |
| 78 | TRPM1 | transient receptor potential cation channel subfamily M member 1 [Source:HGNC Symbol;Acc:HGNC:7146] | 36233 | -3.545 | 0.0232 | Yes |
