Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetCHR16Q13
Enrichment Score (ES)0.5499465
Normalized Enrichment Score (NES)1.1812761
Nominal p-value0.16317992
FDR q-value0.38498896
FWER p-Value0.974
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR16Q13   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1NLRC5NLR family CARD domain containing 5 [Source:HGNC Symbol;Acc:HGNC:29933]1404.3790.1282Yes
2MT1Gmetallothionein 1G [Source:HGNC Symbol;Acc:HGNC:7399]4773.2760.2179Yes
3MT2Ametallothionein 2A [Source:HGNC Symbol;Acc:HGNC:7406]6392.8900.3007Yes
4MT1Ametallothionein 1A [Source:HGNC Symbol;Acc:HGNC:7393]8972.4940.3689Yes
5MT1Xmetallothionein 1X [Source:HGNC Symbol;Acc:HGNC:7405]10852.1820.4296Yes
6MT1Emetallothionein 1E [Source:HGNC Symbol;Acc:HGNC:7397]13232.0040.4836Yes
7HERPUD1homocysteine inducible ER protein with ubiquitin like domain 1 [Source:HGNC Symbol;Acc:HGNC:13744]17861.5560.5181Yes
8OGFOD12-oxoglutarate and iron dependent oxygenase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25585]21141.3500.5499Yes
9MT1Lmetallothionein 1L, pseudogene [Source:HGNC Symbol;Acc:HGNC:7404]41080.4730.5104No
10MT1Hmetallothionein 1H [Source:HGNC Symbol;Acc:HGNC:7400]43200.4730.5190No
11MT1Bmetallothionein 1B [Source:HGNC Symbol;Acc:HGNC:7394]44070.4690.5308No
12MT1Mmetallothionein 1M [Source:HGNC Symbol;Acc:HGNC:14296]51920.2150.5161No
13RSPRY1ring finger and SPRY domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29420]53640.1690.5166No
14PSME3IP1proteasome activator subunit 3 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:29856]57120.0780.5096No
15AC040168.1novel transcript82090.0000.4423No
16CETPcholesteryl ester transfer protein [Source:HGNC Symbol;Acc:HGNC:1869]95870.0000.4051No
17DPPA2P4developmental pluripotency associated 2 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:44629]96200.0000.4042No
18PLLPplasmolipin [Source:HGNC Symbol;Acc:HGNC:18553]97820.0000.3999No
19DKFZP434H168uncharacterized LOC26077 [Source:NCBI gene (formerly Entrezgene);Acc:26077]108370.0000.3714No
20MT1DPmetallothionein 1D, pseudogene [Source:HGNC Symbol;Acc:HGNC:7396]157270.0000.2395No
21MT1CPmetallothionein 1C, pseudogene [Source:HGNC Symbol;Acc:HGNC:7395]157350.0000.2393No
22MT1JPmetallothionein 1J, pseudogene [Source:HGNC Symbol;Acc:HGNC:7402]158140.0000.2372No
23AC106779.1novel transcript, antisense to NUP93168140.0000.2103No
24SLC12A3solute carrier family 12 member 3 [Source:HGNC Symbol;Acc:HGNC:10912]175440.0000.1906No
25MT4metallothionein 4 [Source:HGNC Symbol;Acc:HGNC:18705]190920.0000.1488No
26MT3metallothionein 3 [Source:HGNC Symbol;Acc:HGNC:7408]190930.0000.1488No
27MIR138-2microRNA 138-2 [Source:HGNC Symbol;Acc:HGNC:31525]207010.0000.1055No
28MIR3935microRNA 3935 [Source:HGNC Symbol;Acc:HGNC:38918]255640.000-0.0258No
29GNAO1G protein subunit alpha o1 [Source:HGNC Symbol;Acc:HGNC:4389]28602-0.133-0.1037No
30AMFRautocrine motility factor receptor [Source:HGNC Symbol;Acc:HGNC:463]30988-0.765-0.1450No
31NUDT21nudix hydrolase 21 [Source:HGNC Symbol;Acc:HGNC:13870]31738-1.003-0.1350No
32NUP93nucleoporin 93 [Source:HGNC Symbol;Acc:HGNC:28958]32898-1.398-0.1241No
33ARL2BPADP ribosylation factor like GTPase 2 binding protein [Source:HGNC Symbol;Acc:HGNC:17146]32995-1.447-0.0831No
34MT1Fmetallothionein 1F [Source:HGNC Symbol;Acc:HGNC:7398]34090-1.959-0.0536No
35BBS2Bardet-Biedl syndrome 2 [Source:HGNC Symbol;Acc:HGNC:967]34171-2.0080.0048No
36CPNE2copine 2 [Source:HGNC Symbol;Acc:HGNC:2315]34962-2.4550.0574No
Table: GSEA details [plain text format]



Fig 2: CHR16Q13   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR16Q13: Random ES distribution   
Gene set null distribution of ES for CHR16Q13