Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_NA |
| GeneSet | CHR1Q22 |
| Enrichment Score (ES) | -0.70461744 |
| Normalized Enrichment Score (NES) | -1.3955848 |
| Nominal p-value | 0.016806724 |
| FDR q-value | 0.46365443 |
| FWER p-Value | 0.93 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | CCT3 | chaperonin containing TCP1 subunit 3 [Source:HGNC Symbol;Acc:HGNC:1616] | 1586 | 1.729 | -0.0145 | No |
| 2 | SSR2 | signal sequence receptor subunit 2 [Source:HGNC Symbol;Acc:HGNC:11324] | 2346 | 1.220 | -0.0150 | No |
| 3 | KHDC4 | KH domain containing 4, pre-mRNA splicing factor [Source:HGNC Symbol;Acc:HGNC:29145] | 2477 | 1.157 | 0.0004 | No |
| 4 | ARHGEF2 | Rho/Rac guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:682] | 3744 | 0.584 | -0.0242 | No |
| 5 | RHBG | Rh family B glycoprotein (gene/pseudogene) [Source:HGNC Symbol;Acc:HGNC:14572] | 3877 | 0.531 | -0.0191 | No |
| 6 | RIT1 | Ras like without CAAX 1 [Source:HGNC Symbol;Acc:HGNC:10023] | 3921 | 0.515 | -0.0118 | No |
| 7 | HCN3 | hyperpolarization activated cyclic nucleotide gated potassium channel 3 [Source:HGNC Symbol;Acc:HGNC:19183] | 4110 | 0.473 | -0.0091 | No |
| 8 | MEF2D | myocyte enhancer factor 2D [Source:HGNC Symbol;Acc:HGNC:6997] | 4908 | 0.313 | -0.0255 | No |
| 9 | ASH1L-AS1 | ASH1L antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44146] | 6697 | 0.000 | -0.0738 | No |
| 10 | SCARNA4 | small Cajal body-specific RNA 4 [Source:HGNC Symbol;Acc:HGNC:32560] | 7520 | 0.000 | -0.0960 | No |
| 11 | RUSC1-AS1 | RUSC1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:26680] | 8294 | 0.000 | -0.1169 | No |
| 12 | RXFP4 | relaxin family peptide/INSL5 receptor 4 [Source:HGNC Symbol;Acc:HGNC:14666] | 11452 | 0.000 | -0.2022 | No |
| 13 | MUC1 | mucin 1, cell surface associated [Source:HGNC Symbol;Acc:HGNC:7508] | 12639 | 0.000 | -0.2342 | No |
| 14 | SNORA80E | small nucleolar RNA, H/ACA box 80E [Source:HGNC Symbol;Acc:HGNC:32635] | 16132 | 0.000 | -0.3285 | No |
| 15 | PAQR6 | progestin and adipoQ receptor family member 6 [Source:HGNC Symbol;Acc:HGNC:30132] | 17566 | 0.000 | -0.3672 | No |
| 16 | MTX1P1 | metaxin 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:7505] | 18861 | 0.000 | -0.4022 | No |
| 17 | RNU6-106P | RNA, U6 small nuclear 106, pseudogene [Source:HGNC Symbol;Acc:HGNC:47069] | 20346 | 0.000 | -0.4422 | No |
| 18 | MSTO2P | misato family member 2, pseudogene [Source:HGNC Symbol;Acc:HGNC:26329] | 20677 | 0.000 | -0.4511 | No |
| 19 | TTC24 | tetratricopeptide repeat domain 24 [Source:HGNC Symbol;Acc:HGNC:32348] | 22315 | 0.000 | -0.4954 | No |
| 20 | ASH1L-IT1 | ASH1L intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41449] | 23049 | 0.000 | -0.5152 | No |
| 21 | POU5F1P4 | POU class 5 homeobox 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:33310] | 23462 | 0.000 | -0.5263 | No |
| 22 | RNU6-1297P | RNA, U6 small nuclear 1297, pseudogene [Source:HGNC Symbol;Acc:HGNC:48260] | 24401 | 0.000 | -0.5516 | No |
| 23 | MIR555 | microRNA 555 [Source:HGNC Symbol;Acc:HGNC:32811] | 26077 | 0.000 | -0.5969 | No |
| 24 | TSACC | TSSK6 activating cochaperone [Source:HGNC Symbol;Acc:HGNC:30636] | 26205 | 0.000 | -0.6003 | No |
| 25 | BGLAP | bone gamma-carboxyglutamate protein [Source:HGNC Symbol;Acc:HGNC:1043] | 27704 | 0.000 | -0.6407 | No |
| 26 | MIR92B | microRNA 92b [Source:HGNC Symbol;Acc:HGNC:32920] | 27833 | 0.000 | -0.6442 | No |
| 27 | MIR9-1 | microRNA 9-1 [Source:HGNC Symbol;Acc:HGNC:31641] | 27866 | 0.000 | -0.6451 | No |
| 28 | PMF1-BGLAP | PMF1-BGLAP readthrough [Source:HGNC Symbol;Acc:HGNC:42953] | 28106 | -0.000 | -0.6515 | No |
| 29 | ASH1L | ASH1 like histone lysine methyltransferase [Source:HGNC Symbol;Acc:HGNC:19088] | 28159 | -0.012 | -0.6527 | No |
| 30 | CLK2 | CDC like kinase 2 [Source:HGNC Symbol;Acc:HGNC:2069] | 28200 | -0.022 | -0.6534 | No |
| 31 | GLMP | glycosylated lysosomal membrane protein [Source:HGNC Symbol;Acc:HGNC:29436] | 28379 | -0.078 | -0.6570 | No |
| 32 | THBS3 | thrombospondin 3 [Source:HGNC Symbol;Acc:HGNC:11787] | 28569 | -0.123 | -0.6600 | No |
| 33 | SLC25A44 | solute carrier family 25 member 44 [Source:HGNC Symbol;Acc:HGNC:29036] | 28647 | -0.144 | -0.6598 | No |
| 34 | SMG5 | SMG5 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:24644] | 28956 | -0.223 | -0.6644 | No |
| 35 | TRIM46 | tripartite motif containing 46 [Source:HGNC Symbol;Acc:HGNC:19019] | 29120 | -0.260 | -0.6646 | No |
| 36 | GON4L | gon-4 like [Source:HGNC Symbol;Acc:HGNC:25973] | 29749 | -0.429 | -0.6745 | No |
| 37 | SCAMP3 | secretory carrier membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:10565] | 30124 | -0.533 | -0.6759 | No |
| 38 | KRTCAP2 | keratinocyte associated protein 2 [Source:HGNC Symbol;Acc:HGNC:28942] | 31190 | -0.823 | -0.6911 | Yes |
| 39 | MTX1 | metaxin 1 [Source:HGNC Symbol;Acc:HGNC:7504] | 31667 | -0.982 | -0.6879 | Yes |
| 40 | GBA | glucosylceramidase beta [Source:HGNC Symbol;Acc:HGNC:4177] | 31808 | -1.026 | -0.6749 | Yes |
| 41 | GBAP1 | glucosylceramidase beta pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:4178] | 31857 | -1.042 | -0.6591 | Yes |
| 42 | DAP3 | death associated protein 3 [Source:HGNC Symbol;Acc:HGNC:2673] | 32024 | -1.102 | -0.6455 | Yes |
| 43 | RUSC1 | RUN and SH3 domain containing 1 [Source:HGNC Symbol;Acc:HGNC:17153] | 32198 | -1.175 | -0.6310 | Yes |
| 44 | VHLL | VHL like [Source:HGNC Symbol;Acc:HGNC:30666] | 32440 | -1.232 | -0.6173 | Yes |
| 45 | LMNA | lamin A/C [Source:HGNC Symbol;Acc:HGNC:6636] | 32700 | -1.320 | -0.6027 | Yes |
| 46 | FAM189B | family with sequence similarity 189 member B [Source:HGNC Symbol;Acc:HGNC:1233] | 33099 | -1.490 | -0.5890 | Yes |
| 47 | RAB25 | RAB25, member RAS oncogene family [Source:HGNC Symbol;Acc:HGNC:18238] | 33355 | -1.595 | -0.5697 | Yes |
| 48 | LAMTOR2 | late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:HGNC Symbol;Acc:HGNC:29796] | 33361 | -1.600 | -0.5437 | Yes |
| 49 | MEX3A | mex-3 RNA binding family member A [Source:HGNC Symbol;Acc:HGNC:33482] | 33459 | -1.647 | -0.5193 | Yes |
| 50 | SLC50A1 | solute carrier family 50 member 1 [Source:HGNC Symbol;Acc:HGNC:30657] | 33584 | -1.711 | -0.4946 | Yes |
| 51 | HMGN2P18 | high mobility group nucleosomal binding domain 2 pseudogene 18 [Source:HGNC Symbol;Acc:HGNC:39382] | 33652 | -1.740 | -0.4679 | Yes |
| 52 | PKLR | pyruvate kinase L/R [Source:HGNC Symbol;Acc:HGNC:9020] | 33701 | -1.753 | -0.4405 | Yes |
| 53 | UBQLN4 | ubiquilin 4 [Source:HGNC Symbol;Acc:HGNC:1237] | 33835 | -1.828 | -0.4142 | Yes |
| 54 | NAXE | NAD(P)HX epimerase [Source:HGNC Symbol;Acc:HGNC:18453] | 33913 | -1.874 | -0.3856 | Yes |
| 55 | YY1AP1 | YY1 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:30935] | 34166 | -2.005 | -0.3595 | Yes |
| 56 | FDPS | farnesyl diphosphate synthase [Source:HGNC Symbol;Acc:HGNC:3631] | 34167 | -2.006 | -0.3266 | Yes |
| 57 | MSTO1 | misato mitochondrial distribution and morphology regulator 1 [Source:HGNC Symbol;Acc:HGNC:29678] | 34528 | -2.183 | -0.3006 | Yes |
| 58 | DPM3 | dolichyl-phosphate mannosyltransferase subunit 3, regulatory [Source:HGNC Symbol;Acc:HGNC:3007] | 34685 | -2.279 | -0.2675 | Yes |
| 59 | SEMA4A | semaphorin 4A [Source:HGNC Symbol;Acc:HGNC:10729] | 34942 | -2.439 | -0.2344 | Yes |
| 60 | EFNA1 | ephrin A1 [Source:HGNC Symbol;Acc:HGNC:3221] | 35205 | -2.655 | -0.1980 | Yes |
| 61 | PMF1 | polyamine modulated factor 1 [Source:HGNC Symbol;Acc:HGNC:9112] | 35397 | -2.751 | -0.1581 | Yes |
| 62 | TMEM79 | transmembrane protein 79 [Source:HGNC Symbol;Acc:HGNC:28196] | 35555 | -2.891 | -0.1150 | Yes |
| 63 | SYT11 | synaptotagmin 11 [Source:HGNC Symbol;Acc:HGNC:19239] | 35658 | -3.026 | -0.0682 | Yes |
| 64 | IQGAP3 | IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669] | 35851 | -3.186 | -0.0212 | Yes |
| 65 | DAP3P1 | death associated protein 3 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:17624] | 36001 | -3.335 | 0.0294 | Yes |
