Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetCHR2Q31
Enrichment Score (ES)-0.61576056
Normalized Enrichment Score (NES)-1.3073986
Nominal p-value0.021528525
FDR q-value0.61122197
FWER p-Value1.0
Table: GSEA Results Summary



Fig 1: Enrichment plot: CHR2Q31   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1DHRS9dehydrogenase/reductase 9 [Source:HGNC Symbol;Acc:HGNC:16888]6162.9580.0133No
2CHN1chimerin 1 [Source:HGNC Symbol;Acc:HGNC:1943]16271.6940.0031No
3H3P6H3 histone pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:42980]17361.5920.0163No
4FTH1P20ferritin heavy chain 1 pseudogene 20 [Source:HGNC Symbol;Acc:HGNC:37639]20901.3680.0206No
5EIF2S2P4eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:37626]25061.1360.0209No
6MAP3K20mitogen-activated protein kinase kinase kinase 20 [Source:HGNC Symbol;Acc:HGNC:17797]28430.9560.0215No
7ATF2activating transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:784]30250.8730.0255No
8NFE2L2nuclear factor, erythroid 2 like 2 [Source:HGNC Symbol;Acc:HGNC:7782]30460.8610.0337No
9SLC25A12solute carrier family 25 member 12 [Source:HGNC Symbol;Acc:HGNC:10982]31530.8160.0391No
10DYNC1I2dynein cytoplasmic 1 intermediate chain 2 [Source:HGNC Symbol;Acc:HGNC:2964]32080.7910.0456No
11PHOSPHO2phosphatase, orphan 2 [Source:HGNC Symbol;Acc:HGNC:28316]34120.7110.0473No
12HOXD4homeobox D4 [Source:HGNC Symbol;Acc:HGNC:5138]35720.6500.0496No
13HMGB1P4high mobility group box 1 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:4996]42940.4730.0349No
14RPS6P2ribosomal protein S6 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:36446]43060.4730.0394No
15RPL5P7ribosomal protein L5 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:36583]43600.4730.0428No
16SSBsmall RNA binding exonuclease protection factor La [Source:HGNC Symbol;Acc:HGNC:11316]44240.4650.0458No
17LNPKlunapark, ER junction formation factor [Source:HGNC Symbol;Acc:HGNC:21610]44660.4520.0492No
18PPIGpeptidylprolyl isomerase G [Source:HGNC Symbol;Acc:HGNC:14650]47330.3670.0458No
19API5P2apoptosis inhibitor 5 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:39070]47970.3480.0476No
20BBS5Bardet-Biedl syndrome 5 [Source:HGNC Symbol;Acc:HGNC:970]48470.3330.0496No
21MTX2metaxin 2 [Source:HGNC Symbol;Acc:HGNC:7506]48860.3210.0519No
22METTL5methyltransferase like 5 [Source:HGNC Symbol;Acc:HGNC:25006]51370.2330.0474No
23KLHL41kelch like family member 41 [Source:HGNC Symbol;Acc:HGNC:16905]51480.2310.0495No
24AGPSalkylglycerone phosphate synthase [Source:HGNC Symbol;Acc:HGNC:327]52640.1970.0484No
25GORASP2golgi reassembly stacking protein 2 [Source:HGNC Symbol;Acc:HGNC:17500]54470.1430.0449No
26ITPRID2ITPR interacting domain containing 2 [Source:HGNC Symbol;Acc:HGNC:11319]55360.1260.0438No
27WIPF1WAS/WASL interacting protein family member 1 [Source:HGNC Symbol;Acc:HGNC:12736]56450.0950.0418No
28CWC22CWC22 spliceosome associated protein homolog [Source:HGNC Symbol;Acc:HGNC:29322]57800.0550.0388No
29RNU5E-9PRNA, U5E small nuclear 9, pseudogene [Source:HGNC Symbol;Acc:HGNC:42532]60700.0000.0310No
30RAPGEF4Rap guanine nucleotide exchange factor 4 [Source:HGNC Symbol;Acc:HGNC:16626]63200.0000.0242No
31LINC01305long intergenic non-protein coding RNA 1305 [Source:HGNC Symbol;Acc:HGNC:27690]67000.0000.0140No
32LRP2LDL receptor related protein 2 [Source:HGNC Symbol;Acc:HGNC:6694]70830.0000.0036No
33RNU6-187PRNA, U6 small nuclear 187, pseudogene [Source:HGNC Symbol;Acc:HGNC:47150]71830.0000.0009No
34RNU6-182PRNA, U6 small nuclear 182, pseudogene [Source:HGNC Symbol;Acc:HGNC:47145]72270.000-0.0002No
35MIR4444-1microRNA 4444-1 [Source:HGNC Symbol;Acc:HGNC:41710]82670.000-0.0283No
36HOXD1homeobox D1 [Source:HGNC Symbol;Acc:HGNC:5132]85310.000-0.0355No
37HOXD3homeobox D3 [Source:HGNC Symbol;Acc:HGNC:5137]85640.000-0.0363No
38HOXD9homeobox D9 [Source:HGNC Symbol;Acc:HGNC:5140]85670.000-0.0364No
39HOXD8homeobox D8 [Source:HGNC Symbol;Acc:HGNC:5139]85680.000-0.0364No
40LINC01124long intergenic non-protein coding RNA 1124 [Source:HGNC Symbol;Acc:HGNC:49270]86240.000-0.0379No
41LINC01117long intergenic non-protein coding RNA 1117 [Source:HGNC Symbol;Acc:HGNC:49260]86340.000-0.0381No
42LINC01116long intergenic non-protein coding RNA 1116 [Source:HGNC Symbol;Acc:HGNC:49259]86390.000-0.0382No
43PJVKpejvakin [Source:HGNC Symbol;Acc:HGNC:29502]92120.000-0.0537No
44RNU6-5PRNA, U6 small nuclear 5, pseudogene [Source:HGNC Symbol;Acc:HGNC:34249]93190.000-0.0566No
45ALDH7A1P2aldehyde dehydrogenase 7 family member A1 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:879]95240.000-0.0621No
46RNU7-104PRNA, U7 small nuclear 104 pseudogene [Source:HGNC Symbol;Acc:HGNC:45638]99520.000-0.0736No
47PDE11Aphosphodiesterase 11A [Source:HGNC Symbol;Acc:HGNC:8773]100320.000-0.0758No
48AC019080.1novel transcript102500.000-0.0817No
49SCHLAP1SWI/SNF complex antagonist associated with prostate cancer 1 [Source:HGNC Symbol;Acc:HGNC:48603]107850.000-0.0961No
50RNU6-763PRNA, U6 small nuclear 763, pseudogene [Source:HGNC Symbol;Acc:HGNC:47726]111060.000-0.1048No
51UBE2V1P6ubiquitin conjugating enzyme E2 V1 pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:44889]112180.000-0.1078No
52FUCA1P1alpha-L-fucosidase 1 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:4007]116760.000-0.1201No
53CYCTPcytochrome c, testis, pseudogene [Source:HGNC Symbol;Acc:HGNC:24424]119810.000-0.1284No
54G6PC2glucose-6-phosphatase catalytic subunit 2 [Source:HGNC Symbol;Acc:HGNC:28906]121940.000-0.1341No
55SP5Sp5 transcription factor [Source:HGNC Symbol;Acc:HGNC:14529]122000.000-0.1342No
56GAD1glutamate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:4092]123230.000-0.1375No
57ITGA6-AS1ITGA6 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40308]123450.000-0.1381No
58TTNtitin [Source:HGNC Symbol;Acc:HGNC:12403]125200.000-0.1428No
59HOXD13homeobox D13 [Source:HGNC Symbol;Acc:HGNC:5136]130510.000-0.1572No
60HOXD12homeobox D12 [Source:HGNC Symbol;Acc:HGNC:5135]130520.000-0.1572No
61HOXD11homeobox D11 [Source:HGNC Symbol;Acc:HGNC:5134]130540.000-0.1572No
62HOXD10homeobox D10 [Source:HGNC Symbol;Acc:HGNC:5133]130560.000-0.1572No
63MIR1258microRNA 1258 [Source:HGNC Symbol;Acc:HGNC:35323]131850.000-0.1607No
64AC073636.1novel transcript154910.000-0.2231No
65KRT8P40keratin 8 pseudogene 40 [Source:HGNC Symbol;Acc:HGNC:39874]164050.000-0.2478No
66RAPGEF4-AS1RAPGEF4 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:28081]166950.000-0.2556No
67DLX1distal-less homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2914]167220.000-0.2563No
68DLX2distal-less homeobox 2 [Source:HGNC Symbol;Acc:HGNC:2915]167230.000-0.2563No
69RPL21P38ribosomal protein L21 pseudogene 38 [Source:HGNC Symbol;Acc:HGNC:36349]167510.000-0.2570No
70RNU6ATAC19PRNA, U6atac small nuclear 19, pseudogene [Source:HGNC Symbol;Acc:HGNC:46918]167970.000-0.2582No
71RNU6ATAC14PRNA, U6atac small nuclear 14, pseudogene [Source:HGNC Symbol;Acc:HGNC:46913]169100.000-0.2613No
72PPP1R1Cprotein phosphatase 1 regulatory inhibitor subunit 1C [Source:HGNC Symbol;Acc:HGNC:14940]176120.000-0.2802No
73RNU6-629PRNA, U6 small nuclear 629, pseudogene [Source:HGNC Symbol;Acc:HGNC:47592]176370.000-0.2809No
74DLX2-DTDLX2 divergent transcript [Source:HGNC Symbol;Acc:HGNC:50638]179130.000-0.2883No
75OSBPL6oxysterol binding protein like 6 [Source:HGNC Symbol;Acc:HGNC:16388]184860.000-0.3038No
76RNA5SP113RNA, 5S ribosomal pseudogene 113 [Source:HGNC Symbol;Acc:HGNC:42911]190800.000-0.3199No
77RNA5SP112RNA, 5S ribosomal pseudogene 112 [Source:HGNC Symbol;Acc:HGNC:42910]190830.000-0.3199No
78HOXD-AS2HOXD cluster antisense RNA 2 [Source:HGNC Symbol;Acc:HGNC:43756]191950.000-0.3229No
79NEUROD1neuronal differentiation 1 [Source:HGNC Symbol;Acc:HGNC:7762]192860.000-0.3254No
80KRT18P29keratin 18 pseudogene 29 [Source:HGNC Symbol;Acc:HGNC:33398]204720.000-0.3574No
81HAGLROSHAGLR opposite strand lncRNA [Source:HGNC Symbol;Acc:HGNC:50646]205670.000-0.3600No
82EVX2even-skipped homeobox 2 [Source:HGNC Symbol;Acc:HGNC:3507]206040.000-0.3609No
83MYO3Bmyosin IIIB [Source:HGNC Symbol;Acc:HGNC:15576]210990.000-0.3743No
84CHRNA1cholinergic receptor nicotinic alpha 1 subunit [Source:HGNC Symbol;Acc:HGNC:1955]217270.000-0.3913No
85MIR4437microRNA 4437 [Source:HGNC Symbol;Acc:HGNC:41715]226020.000-0.4149No
86DNAJC19P5DnaJ heat shock protein family (Hsp40) member C19 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:45068]226920.000-0.4173No
87CCDC141coiled-coil domain containing 141 [Source:HGNC Symbol;Acc:HGNC:26821]230230.000-0.4263No
88ABCB11ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]234700.000-0.4383No
89RNU6-1006PRNA, U6 small nuclear 1006, pseudogene [Source:HGNC Symbol;Acc:HGNC:47969]238250.000-0.4479No
90RNU6-1290PRNA, U6 small nuclear 1290, pseudogene [Source:HGNC Symbol;Acc:HGNC:48253]242360.000-0.4590No
91RN7SL65PRNA, 7SL, cytoplasmic 65, pseudogene [Source:HGNC Symbol;Acc:HGNC:46081]246810.000-0.4710No
92HAGLRHOXD antisense growth-associated long non-coding RNA [Source:HGNC Symbol;Acc:HGNC:43755]248900.000-0.4767No
93LINC01934long intergenic non-protein coding RNA 1934 [Source:HGNC Symbol;Acc:HGNC:52757]252400.000-0.4861No
94LINC01960long intergenic non-protein coding RNA 1960 [Source:HGNC Symbol;Acc:HGNC:52785]252690.000-0.4869No
95PTCHD3P2patched domain containing 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:44946]254770.000-0.4925No
96MIR3128microRNA 3128 [Source:HGNC Symbol;Acc:HGNC:38188]258540.000-0.5026No
97MIR10BmicroRNA 10b [Source:HGNC Symbol;Acc:HGNC:31498]260220.000-0.5072No
98ERICH2glutamate rich 2 [Source:HGNC Symbol;Acc:HGNC:44395]260600.000-0.5082No
99ZNF385Bzinc finger protein 385B [Source:HGNC Symbol;Acc:HGNC:26332]264720.000-0.5193No
100CYBRD1cytochrome b reductase 1 [Source:HGNC Symbol;Acc:HGNC:20797]266600.000-0.5243No
101MIR933microRNA 933 [Source:HGNC Symbol;Acc:HGNC:33676]278490.000-0.5565No
102ATP5MC3ATP synthase membrane subunit c locus 3 [Source:HGNC Symbol;Acc:HGNC:843]28314-0.059-0.5685No
103SP9Sp9 transcription factor [Source:HGNC Symbol;Acc:HGNC:30690]29290-0.311-0.5917No
104MAP3K20-AS1MAP3K20 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:27935]29299-0.313-0.5887No
105PLEKHA3pleckstrin homology domain containing A3 [Source:HGNC Symbol;Acc:HGNC:14338]29672-0.408-0.5947No
106RBM45RNA binding motif protein 45 [Source:HGNC Symbol;Acc:HGNC:24468]29837-0.452-0.5945No
107UBR3ubiquitin protein ligase E3 component n-recognin 3 [Source:HGNC Symbol;Acc:HGNC:30467]30317-0.560-0.6018No
108RPSAP25ribosomal protein SA pseudogene 25 [Source:HGNC Symbol;Acc:HGNC:36405]30833-0.720-0.6085Yes
109FASTKD1FAST kinase domains 1 [Source:HGNC Symbol;Acc:HGNC:26150]31006-0.773-0.6053Yes
110RPSAP24ribosomal protein SA pseudogene 24 [Source:HGNC Symbol;Acc:HGNC:36362]31084-0.795-0.5993Yes
111DAP3P2death associated protein 3 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:29762]31085-0.795-0.5913Yes
112SESTD1SEC14 and spectrin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:18379]31165-0.814-0.5851Yes
113TLK1tousled like kinase 1 [Source:HGNC Symbol;Acc:HGNC:11841]31182-0.820-0.5773Yes
114METAP1Dmethionyl aminopeptidase type 1D, mitochondrial [Source:HGNC Symbol;Acc:HGNC:32583]31362-0.879-0.5732Yes
115METTL8methyltransferase like 8 [Source:HGNC Symbol;Acc:HGNC:25856]31693-0.988-0.5721Yes
116HAT1histone acetyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:4821]31980-1.085-0.5689Yes
117HNRNPA3heterogeneous nuclear ribonucleoprotein A3 [Source:HGNC Symbol;Acc:HGNC:24941]32128-1.148-0.5612Yes
118DCAF17DDB1 and CUL4 associated factor 17 [Source:HGNC Symbol;Acc:HGNC:25784]32577-1.258-0.5606Yes
119CIR1corepressor interacting with RBPJ, CIR1 [Source:HGNC Symbol;Acc:HGNC:24217]33282-1.567-0.5638Yes
120CERKLceramide kinase like [Source:HGNC Symbol;Acc:HGNC:21699]33324-1.587-0.5488Yes
121SP3Sp3 transcription factor [Source:HGNC Symbol;Acc:HGNC:11208]33575-1.706-0.5383Yes
122OLA1Obg like ATPase 1 [Source:HGNC Symbol;Acc:HGNC:28833]33623-1.734-0.5220Yes
123HNRNPA1P39heterogeneous nuclear ribonucleoprotein A1 pseudogene 39 [Source:HGNC Symbol;Acc:HGNC:48768]33670-1.740-0.5056Yes
124UBE2E3ubiquitin conjugating enzyme E2 E3 [Source:HGNC Symbol;Acc:HGNC:12479]34012-1.919-0.4954Yes
125EXTL2P1exostosin like glycosyltransferase 2 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:3517]34471-2.134-0.4862Yes
126CCDC173coiled-coil domain containing 173 [Source:HGNC Symbol;Acc:HGNC:25064]34621-2.245-0.4674Yes
127SAP18P2SAP18 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51568]35258-2.679-0.4575Yes
128TTC30Btetratricopeptide repeat domain 30B [Source:HGNC Symbol;Acc:HGNC:26425]35774-3.113-0.4399Yes
129ITGA6integrin subunit alpha 6 [Source:HGNC Symbol;Acc:HGNC:6142]35891-3.250-0.4101Yes
130SCRN3secernin 3 [Source:HGNC Symbol;Acc:HGNC:30382]36045-3.376-0.3801Yes
131CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36057-3.385-0.3461Yes
132TTC30Atetratricopeptide repeat domain 30A [Source:HGNC Symbol;Acc:HGNC:25853]36287-3.612-0.3157Yes
133PRKRAprotein activator of interferon induced protein kinase EIF2AK2 [Source:HGNC Symbol;Acc:HGNC:9438]36396-3.745-0.2806Yes
134TTN-AS1TTN antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:44124]36564-3.960-0.2450Yes
135ITGA4integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]36608-4.016-0.2055Yes
136GPR155G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]36661-4.067-0.1657Yes
137FKBP7FKBP prolyl isomerase 7 [Source:HGNC Symbol;Acc:HGNC:3723]36773-4.223-0.1259Yes
138SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36783-4.238-0.0832Yes
139KLHL23kelch like family member 23 [Source:HGNC Symbol;Acc:HGNC:27506]36903-4.469-0.0411Yes
140PDK1pyruvate dehydrogenase kinase 1 [Source:HGNC Symbol;Acc:HGNC:8809]36943-4.5580.0040Yes
Table: GSEA details [plain text format]



Fig 2: CHR2Q31   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: CHR2Q31: Random ES distribution   
Gene set null distribution of ES for CHR2Q31