Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | CHR3P13 |
| Enrichment Score (ES) | 0.5910624 |
| Normalized Enrichment Score (NES) | 1.2902647 |
| Nominal p-value | 0.08675799 |
| FDR q-value | 0.3429648 |
| FWER p-Value | 0.862 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | RYBP | RING1 and YY1 binding protein [Source:HGNC Symbol;Acc:HGNC:10480] | 844 | 2.578 | 0.2141 | Yes |
| 2 | PPP4R2 | protein phosphatase 4 regulatory subunit 2 [Source:HGNC Symbol;Acc:HGNC:18296] | 1068 | 2.206 | 0.4107 | Yes |
| 3 | FTH1P23 | ferritin heavy chain 1 pseudogene 23 [Source:HGNC Symbol;Acc:HGNC:37641] | 2100 | 1.359 | 0.5077 | Yes |
| 4 | FOXP1 | forkhead box P1 [Source:HGNC Symbol;Acc:HGNC:3823] | 2684 | 1.028 | 0.5864 | Yes |
| 5 | UBE2Q2P9 | ubiquitin conjugating enzyme E2 Q2 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:49517] | 4220 | 0.473 | 0.5884 | Yes |
| 6 | FOXP1-IT1 | FOXP1 intronic transcript 1 [Source:HGNC Symbol;Acc:HGNC:41335] | 5031 | 0.267 | 0.5911 | Yes |
| 7 | SHQ1 | SHQ1, H/ACA ribonucleoprotein assembly factor [Source:HGNC Symbol;Acc:HGNC:25543] | 5905 | 0.017 | 0.5690 | No |
| 8 | RNU2-64P | RNA, U2 small nuclear 64, pseudogene [Source:HGNC Symbol;Acc:HGNC:48557] | 7591 | 0.000 | 0.5235 | No |
| 9 | PROK2 | prokineticin 2 [Source:HGNC Symbol;Acc:HGNC:18455] | 7952 | 0.000 | 0.5138 | No |
| 10 | MDFIC2 | MyoD family inhibitor domain containing 2 [Source:HGNC Symbol;Acc:HGNC:53442] | 8004 | 0.000 | 0.5125 | No |
| 11 | EBLN2 | endogenous Bornavirus like nucleoprotein 2 [Source:HGNC Symbol;Acc:HGNC:25493] | 9270 | 0.000 | 0.4783 | No |
| 12 | RNU6-557P | RNA, U6 small nuclear 557, pseudogene [Source:HGNC Symbol;Acc:HGNC:47520] | 10305 | 0.000 | 0.4504 | No |
| 13 | RNU7-119P | RNA, U7 small nuclear 119 pseudogene [Source:HGNC Symbol;Acc:HGNC:45653] | 10419 | 0.000 | 0.4474 | No |
| 14 | HMGB1P36 | high mobility group box 1 pseudogene 36 [Source:HGNC Symbol;Acc:HGNC:39176] | 10660 | 0.000 | 0.4409 | No |
| 15 | PDZRN3 | PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704] | 11321 | 0.000 | 0.4231 | No |
| 16 | RN7SL418P | RNA, 7SL, cytoplasmic 418, pseudogene [Source:HGNC Symbol;Acc:HGNC:46434] | 11679 | 0.000 | 0.4134 | No |
| 17 | UQCRHP4 | ubiquinol-cytochrome c reductase hinge protein pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:38047] | 12033 | 0.000 | 0.4039 | No |
| 18 | MIR1284 | microRNA 1284 [Source:HGNC Symbol;Acc:HGNC:35362] | 12294 | 0.000 | 0.3969 | No |
| 19 | CCDC75P1 | coiled-coil domain containing 75 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:42659] | 12302 | 0.000 | 0.3967 | No |
| 20 | RNU6-281P | RNA, U6 small nuclear 281, pseudogene [Source:HGNC Symbol;Acc:HGNC:47244] | 14962 | 0.000 | 0.3249 | No |
| 21 | RNU7-19P | RNA, U7 small nuclear 19 pseudogene [Source:HGNC Symbol;Acc:HGNC:34115] | 15322 | 0.000 | 0.3153 | No |
| 22 | PDZRN3-AS1 | PDZRN3 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:40814] | 15477 | 0.000 | 0.3111 | No |
| 23 | SAMMSON | survival associated mitochondrial melanoma specific oncogenic non-coding RNA [Source:HGNC Symbol;Acc:HGNC:49644] | 17006 | 0.000 | 0.2699 | No |
| 24 | GPR27 | G protein-coupled receptor 27 [Source:HGNC Symbol;Acc:HGNC:4482] | 17452 | 0.000 | 0.2578 | No |
| 25 | LAPTM4BP2 | lysosomal protein transmembrane 4 beta pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:51935] | 18833 | 0.000 | 0.2206 | No |
| 26 | RNA5SP136 | RNA, 5S ribosomal pseudogene 136 [Source:HGNC Symbol;Acc:HGNC:43036] | 19126 | 0.000 | 0.2127 | No |
| 27 | LINC00877 | long intergenic non-protein coding RNA 877 [Source:HGNC Symbol;Acc:HGNC:27706] | 20066 | 0.000 | 0.1874 | No |
| 28 | LINC00870 | long intergenic non-protein coding RNA 870 [Source:HGNC Symbol;Acc:HGNC:27319] | 20068 | 0.000 | 0.1874 | No |
| 29 | RN7SL271P | RNA, 7SL, cytoplasmic 271, pseudogene [Source:HGNC Symbol;Acc:HGNC:46287] | 20479 | 0.000 | 0.1763 | No |
| 30 | GXYLT2 | glucoside xylosyltransferase 2 [Source:HGNC Symbol;Acc:HGNC:33383] | 22073 | 0.000 | 0.1333 | No |
| 31 | RNU1-62P | RNA, U1 small nuclear 62, pseudogene [Source:HGNC Symbol;Acc:HGNC:48404] | 22716 | 0.000 | 0.1160 | No |
| 32 | RNU6-1270P | RNA, U6 small nuclear 1270, pseudogene [Source:HGNC Symbol;Acc:HGNC:48233] | 23670 | 0.000 | 0.0902 | No |
| 33 | FOXP1-AS1 | FOXP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:41942] | 25873 | 0.000 | 0.0308 | No |
| 34 | LINC02047 | long intergenic non-protein coding RNA 2047 [Source:HGNC Symbol;Acc:HGNC:52887] | 26261 | 0.000 | 0.0204 | No |
| 35 | LINC02005 | long intergenic non-protein coding RNA 2005 [Source:HGNC Symbol;Acc:HGNC:52839] | 26395 | 0.000 | 0.0168 | No |
| 36 | MITF | melanocyte inducing transcription factor [Source:HGNC Symbol;Acc:HGNC:7105] | 29243 | -0.296 | -0.0329 | No |
| 37 | COX6CP6 | cytochrome c oxidase subunit 6C pseudogene 6 [Source:HGNC Symbol;Acc:HGNC:47037] | 30415 | -0.589 | -0.0104 | No |
| 38 | EIF4E3 | eukaryotic translation initiation factor 4E family member 3 [Source:HGNC Symbol;Acc:HGNC:31837] | 34295 | -2.074 | 0.0754 | No |
