Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | greenberg_collapsed_to_symbols.Nof1.cls #KO_LPS_versus_KO_NA.Nof1.cls #KO_LPS_versus_KO_NA_repos |
| Phenotype | Nof1.cls#KO_LPS_versus_KO_NA_repos |
| Upregulated in class | KO_LPS |
| GeneSet | CHR4Q32 |
| Enrichment Score (ES) | 0.48390532 |
| Normalized Enrichment Score (NES) | 1.224201 |
| Nominal p-value | 0.041322313 |
| FDR q-value | 0.3613253 |
| FWER p-Value | 0.945 |
| SYMBOL | TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|
| 1 | DDX60L | DExD/H-box 60 like [Source:HGNC Symbol;Acc:HGNC:26429] | 50 | 4.848 | 0.0872 | Yes |
| 2 | YWHAEP4 | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:49440] | 133 | 4.424 | 0.1659 | Yes |
| 3 | DDX60 | DExD/H-box helicase 60 [Source:HGNC Symbol;Acc:HGNC:25942] | 298 | 3.789 | 0.2307 | Yes |
| 4 | GK3P | glycerol kinase 3 pseudogene [Source:HGNC Symbol;Acc:HGNC:4292] | 396 | 3.486 | 0.2918 | Yes |
| 5 | RAPGEF2 | Rap guanine nucleotide exchange factor 2 [Source:HGNC Symbol;Acc:HGNC:16854] | 751 | 2.739 | 0.3322 | Yes |
| 6 | NDUFB2P1 | NADH:ubiquinone oxidoreductase subunit B2 pseudogene 2 [Source:HGNC Symbol;Acc:HGNC:52266] | 810 | 2.633 | 0.3788 | Yes |
| 7 | FTH1P21 | ferritin heavy chain 1 pseudogene 21 [Source:HGNC Symbol;Acc:HGNC:3997] | 1030 | 2.268 | 0.4143 | Yes |
| 8 | MTCO2P9 | MT-CO2 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:52025] | 1088 | 2.179 | 0.4526 | Yes |
| 9 | TMA16 | translation machinery associated 16 homolog [Source:HGNC Symbol;Acc:HGNC:25638] | 2030 | 1.409 | 0.4529 | Yes |
| 10 | PPID | peptidylprolyl isomerase D [Source:HGNC Symbol;Acc:HGNC:9257] | 2668 | 1.036 | 0.4546 | Yes |
| 11 | FNIP2 | folliculin interacting protein 2 [Source:HGNC Symbol;Acc:HGNC:29280] | 2797 | 0.982 | 0.4691 | Yes |
| 12 | MTHFD2P4 | methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:48862] | 2881 | 0.934 | 0.4839 | Yes |
| 13 | NOL8P1 | nucleolar protein 8 pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:49557] | 3690 | 0.600 | 0.4730 | No |
| 14 | MSMO1 | methylsterol monooxygenase 1 [Source:HGNC Symbol;Acc:HGNC:10545] | 3933 | 0.511 | 0.4758 | No |
| 15 | NACA3P | NACA family member 3, pseudogene [Source:HGNC Symbol;Acc:HGNC:33442] | 5433 | 0.149 | 0.4380 | No |
| 16 | MTND3P3 | MT-ND3 pseudogene 3 [Source:HGNC Symbol;Acc:HGNC:42155] | 6226 | 0.000 | 0.4166 | No |
| 17 | LRAT | lecithin retinol acyltransferase [Source:HGNC Symbol;Acc:HGNC:6685] | 6898 | 0.000 | 0.3985 | No |
| 18 | MTND6P17 | MT-ND6 pseudogene 17 [Source:HGNC Symbol;Acc:HGNC:39480] | 7543 | 0.000 | 0.3811 | No |
| 19 | ASIC5 | acid sensing ion channel subunit family member 5 [Source:HGNC Symbol;Acc:HGNC:17537] | 7608 | 0.000 | 0.3793 | No |
| 20 | RNU2-66P | RNA, U2 small nuclear 66, pseudogene [Source:HGNC Symbol;Acc:HGNC:48559] | 7610 | 0.000 | 0.3793 | No |
| 21 | RNU6-128P | RNA, U6 small nuclear 128, pseudogene [Source:HGNC Symbol;Acc:HGNC:47091] | 7730 | 0.000 | 0.3761 | No |
| 22 | MTATP6P9 | MT-ATP6 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:44583] | 7976 | 0.000 | 0.3695 | No |
| 23 | RNU2-44P | RNA, U2 small nuclear 44, pseudogene [Source:HGNC Symbol;Acc:HGNC:48537] | 8136 | 0.000 | 0.3652 | No |
| 24 | LINC01179 | long intergenic non-protein coding RNA 1179 [Source:HGNC Symbol;Acc:HGNC:49556] | 8362 | 0.000 | 0.3591 | No |
| 25 | BTF3L4P4 | basic transcription factor 3 like 4 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:39648] | 8484 | 0.000 | 0.3558 | No |
| 26 | NPY2R | neuropeptide Y receptor Y2 [Source:HGNC Symbol;Acc:HGNC:7957] | 8795 | 0.000 | 0.3474 | No |
| 27 | NPY1R | neuropeptide Y receptor Y1 [Source:HGNC Symbol;Acc:HGNC:7956] | 8805 | 0.000 | 0.3472 | No |
| 28 | NPY5R | neuropeptide Y receptor Y5 [Source:HGNC Symbol;Acc:HGNC:7958] | 8834 | 0.000 | 0.3464 | No |
| 29 | GRIA2 | glutamate ionotropic receptor AMPA type subunit 2 [Source:HGNC Symbol;Acc:HGNC:4572] | 8936 | 0.000 | 0.3437 | No |
| 30 | RPPH1-3P | ribonuclease P RNA component H1, 3 pseudogene [Source:HGNC Symbol;Acc:HGNC:47030] | 9204 | 0.000 | 0.3365 | No |
| 31 | SCGB1D5P | secretoglobin family 1D member 5, pseudogene [Source:HGNC Symbol;Acc:HGNC:42735] | 9295 | 0.000 | 0.3341 | No |
| 32 | FABP5P12 | fatty acid binding protein 5 pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:31067] | 9418 | 0.000 | 0.3308 | No |
| 33 | MTND1P22 | MT-ND1 pseudogene 22 [Source:HGNC Symbol;Acc:HGNC:42093] | 9808 | 0.000 | 0.3202 | No |
| 34 | RNY4P17 | RNY4 pseudogene 17 [Source:HGNC Symbol;Acc:HGNC:34067] | 9975 | 0.000 | 0.3158 | No |
| 35 | RNU4-79P | RNA, U4 small nuclear 79, pseudogene [Source:HGNC Symbol;Acc:HGNC:47015] | 10771 | 0.000 | 0.2943 | No |
| 36 | AC023136.1 | novel transcript | 10905 | 0.000 | 0.2907 | No |
| 37 | RNU4-87P | RNA, U4 small nuclear 87, pseudogene [Source:HGNC Symbol;Acc:HGNC:47023] | 10983 | 0.000 | 0.2886 | No |
| 38 | RXFP1 | relaxin family peptide receptor 1 [Source:HGNC Symbol;Acc:HGNC:19718] | 11453 | 0.000 | 0.2759 | No |
| 39 | RNU6-1336P | RNA, U6 small nuclear 1336, pseudogene [Source:HGNC Symbol;Acc:HGNC:48299] | 11681 | 0.000 | 0.2698 | No |
| 40 | TOMM22P4 | TOMM22 pseudogene 4 [Source:HGNC Symbol;Acc:HGNC:38740] | 12977 | 0.000 | 0.2348 | No |
| 41 | PDGFC | platelet derived growth factor C [Source:HGNC Symbol;Acc:HGNC:8801] | 13382 | 0.000 | 0.2238 | No |
| 42 | LINC02272 | long intergenic non-protein coding RNA 2272 [Source:HGNC Symbol;Acc:HGNC:53187] | 13576 | 0.000 | 0.2186 | No |
| 43 | LINC02233 | long intergenic non-protein coding RNA 2233 [Source:HGNC Symbol;Acc:HGNC:53104] | 13635 | 0.000 | 0.2171 | No |
| 44 | FAM218A | family with sequence similarity 218 member A [Source:HGNC Symbol;Acc:HGNC:26466] | 13897 | 0.000 | 0.2100 | No |
| 45 | TLL1 | tolloid like 1 [Source:HGNC Symbol;Acc:HGNC:11843] | 14003 | 0.000 | 0.2072 | No |
| 46 | ANXA10 | annexin A10 [Source:HGNC Symbol;Acc:HGNC:534] | 14177 | 0.000 | 0.2025 | No |
| 47 | TRIM60P14 | tripartite motif containing 60 pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:38486] | 14482 | 0.000 | 0.1943 | No |
| 48 | LINC02477 | long intergenic non-protein coding RNA 2477 [Source:HGNC Symbol;Acc:HGNC:53425] | 14547 | 0.000 | 0.1925 | No |
| 49 | LINC02433 | long intergenic non-protein coding RNA 2433 [Source:HGNC Symbol;Acc:HGNC:27959] | 14759 | 0.000 | 0.1868 | No |
| 50 | RNU6-284P | RNA, U6 small nuclear 284, pseudogene [Source:HGNC Symbol;Acc:HGNC:47247] | 14983 | 0.000 | 0.1808 | No |
| 51 | TRIM60 | tripartite motif containing 60 [Source:HGNC Symbol;Acc:HGNC:21162] | 15206 | 0.000 | 0.1748 | No |
| 52 | TRIM61 | tripartite motif containing 61 [Source:HGNC Symbol;Acc:HGNC:24339] | 15207 | 0.000 | 0.1748 | No |
| 53 | APELA | apelin receptor early endogenous ligand [Source:HGNC Symbol;Acc:HGNC:48925] | 15272 | 0.000 | 0.1731 | No |
| 54 | RNU6-668P | RNA, U6 small nuclear 668, pseudogene [Source:HGNC Symbol;Acc:HGNC:47631] | 15679 | 0.000 | 0.1621 | No |
| 55 | PHBP14 | prohibitin pseudogene 14 [Source:HGNC Symbol;Acc:HGNC:39293] | 16313 | 0.000 | 0.1450 | No |
| 56 | FGG | fibrinogen gamma chain [Source:HGNC Symbol;Acc:HGNC:3694] | 16627 | 0.000 | 0.1365 | No |
| 57 | PALLD | palladin, cytoskeletal associated protein [Source:HGNC Symbol;Acc:HGNC:17068] | 16629 | 0.000 | 0.1365 | No |
| 58 | MIR3688-2 | microRNA 3688-2 [Source:HGNC Symbol;Acc:HGNC:41735] | 16680 | 0.000 | 0.1351 | No |
| 59 | NUDT19P5 | nudix hydrolase 19 pseudogene 5 [Source:HGNC Symbol;Acc:HGNC:43589] | 16699 | 0.000 | 0.1347 | No |
| 60 | RN7SL776P | RNA, 7SL, cytoplasmic 776, pseudogene [Source:HGNC Symbol;Acc:HGNC:46792] | 16916 | 0.000 | 0.1288 | No |
| 61 | SPOCK3 | SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:HGNC Symbol;Acc:HGNC:13565] | 17013 | 0.000 | 0.1262 | No |
| 62 | TKTL2 | transketolase like 2 [Source:HGNC Symbol;Acc:HGNC:25313] | 17189 | 0.000 | 0.1215 | No |
| 63 | RPS14P7 | ribosomal protein S14 pseudogene 7 [Source:HGNC Symbol;Acc:HGNC:36961] | 18065 | 0.000 | 0.0978 | No |
| 64 | RN7SKP188 | RN7SK pseudogene 188 [Source:HGNC Symbol;Acc:HGNC:45912] | 18354 | 0.000 | 0.0900 | No |
| 65 | RNA5SP171 | RNA, 5S ribosomal pseudogene 171 [Source:HGNC Symbol;Acc:HGNC:43071] | 19169 | 0.000 | 0.0680 | No |
| 66 | RNA5SP170 | RNA, 5S ribosomal pseudogene 170 [Source:HGNC Symbol;Acc:HGNC:43070] | 19170 | 0.000 | 0.0680 | No |
| 67 | SMIM31 | small integral membrane protein 31 [Source:HGNC Symbol;Acc:HGNC:49638] | 19754 | 0.000 | 0.0523 | No |
| 68 | RBM46 | RNA binding motif protein 46 [Source:HGNC Symbol;Acc:HGNC:28401] | 20647 | 0.000 | 0.0282 | No |
| 69 | TRIM75P | tripartite motif containing 75, pseudogene [Source:HGNC Symbol;Acc:HGNC:32686] | 21633 | 0.000 | 0.0015 | No |
| 70 | MTND5P9 | MT-ND5 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:42305] | 21700 | 0.000 | -0.0002 | No |
| 71 | RNU6-582P | RNA, U6 small nuclear 582, pseudogene [Source:HGNC Symbol;Acc:HGNC:47545] | 21993 | 0.000 | -0.0081 | No |
| 72 | MTND4P8 | MT-ND4 pseudogene 8 [Source:HGNC Symbol;Acc:HGNC:42227] | 22101 | 0.000 | -0.0110 | No |
| 73 | MTCO3P9 | MT-CO3 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:52039] | 22196 | 0.000 | -0.0136 | No |
| 74 | RNU6-853P | RNA, U6 small nuclear 853, pseudogene [Source:HGNC Symbol;Acc:HGNC:47816] | 23436 | 0.000 | -0.0471 | No |
| 75 | GUCY1B1 | guanylate cyclase 1 soluble subunit beta 1 [Source:HGNC Symbol;Acc:HGNC:4687] | 23884 | 0.000 | -0.0592 | No |
| 76 | GUCY1A1 | guanylate cyclase 1 soluble subunit alpha 1 [Source:HGNC Symbol;Acc:HGNC:4685] | 23890 | 0.000 | -0.0593 | No |
| 77 | MAP9 | microtubule associated protein 9 [Source:HGNC Symbol;Acc:HGNC:26118] | 24555 | 0.000 | -0.0772 | No |
| 78 | TDO2 | tryptophan 2,3-dioxygenase [Source:HGNC Symbol;Acc:HGNC:11708] | 24870 | 0.000 | -0.0857 | No |
| 79 | RN7SKP105 | RN7SK pseudogene 105 [Source:HGNC Symbol;Acc:HGNC:45829] | 25272 | 0.000 | -0.0966 | No |
| 80 | C4orf45 | chromosome 4 open reading frame 45 [Source:HGNC Symbol;Acc:HGNC:26342] | 25346 | 0.000 | -0.0985 | No |
| 81 | MTND2P33 | MT-ND2 pseudogene 33 [Source:HGNC Symbol;Acc:HGNC:42134] | 25509 | 0.000 | -0.1029 | No |
| 82 | AC097467.3 | novel transcript, antisense to MAP9 | 25730 | 0.000 | -0.1089 | No |
| 83 | MIR578 | microRNA 578 [Source:HGNC Symbol;Acc:HGNC:32834] | 26111 | 0.000 | -0.1191 | No |
| 84 | FAM218BP | family with sequence similarity 218 member B, pseudogene [Source:HGNC Symbol;Acc:HGNC:43779] | 26569 | 0.000 | -0.1315 | No |
| 85 | GLRB | glycine receptor beta [Source:HGNC Symbol;Acc:HGNC:4329] | 26722 | 0.000 | -0.1356 | No |
| 86 | HADHAP1 | HADHA pseudogene 1 [Source:HGNC Symbol;Acc:HGNC:4802] | 28549 | -0.117 | -0.1828 | No |
| 87 | ANP32C | acidic nuclear phosphoprotein 32 family member C [Source:HGNC Symbol;Acc:HGNC:16675] | 29071 | -0.244 | -0.1924 | No |
| 88 | CPE | carboxypeptidase E [Source:HGNC Symbol;Acc:HGNC:2303] | 29354 | -0.328 | -0.1941 | No |
| 89 | NAF1 | nuclear assembly factor 1 ribonucleoprotein [Source:HGNC Symbol;Acc:HGNC:25126] | 29564 | -0.377 | -0.1928 | No |
| 90 | CBR4 | carbonyl reductase 4 [Source:HGNC Symbol;Acc:HGNC:25891] | 30111 | -0.530 | -0.1979 | No |
| 91 | RPL35AP12 | ribosomal protein L35a pseudogene 12 [Source:HGNC Symbol;Acc:HGNC:36068] | 30401 | -0.586 | -0.1950 | No |
| 92 | TMEM192 | transmembrane protein 192 [Source:HGNC Symbol;Acc:HGNC:26775] | 31726 | -1.001 | -0.2125 | No |
| 93 | MTCO1P9 | MT-CO1 pseudogene 9 [Source:HGNC Symbol;Acc:HGNC:52011] | 31844 | -1.037 | -0.1967 | No |
| 94 | KLHL2 | kelch like family member 2 [Source:HGNC Symbol;Acc:HGNC:6353] | 31873 | -1.048 | -0.1784 | No |
| 95 | MTCYBP17 | MT-CYB pseudogene 17 [Source:HGNC Symbol;Acc:HGNC:51970] | 32461 | -1.232 | -0.1717 | No |
| 96 | CTSO | cathepsin O [Source:HGNC Symbol;Acc:HGNC:2542] | 32743 | -1.336 | -0.1549 | No |
| 97 | ETFDH | electron transfer flavoprotein dehydrogenase [Source:HGNC Symbol;Acc:HGNC:3483] | 33158 | -1.512 | -0.1384 | No |
| 98 | FSTL5 | follistatin like 5 [Source:HGNC Symbol;Acc:HGNC:21386] | 34803 | -2.349 | -0.1400 | No |
| 99 | GASK1B | golgi associated kinase 1B [Source:HGNC Symbol;Acc:HGNC:25312] | 35919 | -3.281 | -0.1101 | No |
| 100 | TMEM144 | transmembrane protein 144 [Source:HGNC Symbol;Acc:HGNC:25633] | 36471 | -3.835 | -0.0550 | No |
| 101 | C4orf46 | chromosome 4 open reading frame 46 [Source:HGNC Symbol;Acc:HGNC:27320] | 36541 | -3.923 | 0.0148 | No |
