Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_LPS
GeneSetHECKER_IFNB1_TARGETS
Enrichment Score (ES)0.8311957
Normalized Enrichment Score (NES)2.0409667
Nominal p-value0.0
FDR q-value2.7718852E-4
FWER p-Value0.002
Table: GSEA Results Summary



Fig 1: Enrichment plot: HECKER_IFNB1_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1RSAD2radical S-adenosyl methionine domain containing 2 [Source:HGNC Symbol;Acc:HGNC:30908]174.9710.0291Yes
2IFIT2interferon induced protein with tetratricopeptide repeats 2 [Source:HGNC Symbol;Acc:HGNC:5409]354.9280.0579Yes
3IFIT1interferon induced protein with tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:5407]494.8520.0863Yes
4MX2MX dynamin like GTPase 2 [Source:HGNC Symbol;Acc:HGNC:7533]554.8270.1148Yes
5GBP1guanylate binding protein 1 [Source:HGNC Symbol;Acc:HGNC:4182]594.8190.1434Yes
6CMPK2cytidine/uridine monophosphate kinase 2 [Source:HGNC Symbol;Acc:HGNC:27015]604.8190.1720Yes
7MX1MX dynamin like GTPase 1 [Source:HGNC Symbol;Acc:HGNC:7532]664.7760.2002Yes
8MMP9matrix metallopeptidase 9 [Source:HGNC Symbol;Acc:HGNC:7176]714.7570.2284Yes
9CXCL10C-X-C motif chemokine ligand 10 [Source:HGNC Symbol;Acc:HGNC:10637]784.7270.2563Yes
10OASL2'-5'-oligoadenylate synthetase like [Source:HGNC Symbol;Acc:HGNC:8090]854.6820.2839Yes
11IRF7interferon regulatory factor 7 [Source:HGNC Symbol;Acc:HGNC:6122]1014.6170.3109Yes
12HERC6HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 [Source:HGNC Symbol;Acc:HGNC:26072]1064.6050.3382Yes
13IFI44interferon induced protein 44 [Source:HGNC Symbol;Acc:HGNC:16938]1194.5150.3646Yes
14DHX58DExH-box helicase 58 [Source:HGNC Symbol;Acc:HGNC:29517]1804.2200.3881Yes
15SIGLEC1sialic acid binding Ig like lectin 1 [Source:HGNC Symbol;Acc:HGNC:11127]1954.1420.4123Yes
16EIF2AK2eukaryotic translation initiation factor 2 alpha kinase 2 [Source:HGNC Symbol;Acc:HGNC:9437]2284.0360.4354Yes
17DDX58DExD/H-box helicase 58 [Source:HGNC Symbol;Acc:HGNC:19102]2374.0050.4590Yes
18SAMD9Lsterile alpha motif domain containing 9 like [Source:HGNC Symbol;Acc:HGNC:1349]2573.9330.4818Yes
19SAMD9sterile alpha motif domain containing 9 [Source:HGNC Symbol;Acc:HGNC:1348]2643.8820.5047Yes
20STAT1signal transducer and activator of transcription 1 [Source:HGNC Symbol;Acc:HGNC:11362]2713.8640.5275Yes
21IFI35interferon induced protein 35 [Source:HGNC Symbol;Acc:HGNC:5399]2813.8330.5500Yes
22C3AR1complement C3a receptor 1 [Source:HGNC Symbol;Acc:HGNC:1319]2903.8110.5724Yes
23PARP12poly(ADP-ribose) polymerase family member 12 [Source:HGNC Symbol;Acc:HGNC:21919]2913.8080.5950Yes
24DDX60DExD/H-box helicase 60 [Source:HGNC Symbol;Acc:HGNC:25942]2983.7890.6174Yes
25OAS12'-5'-oligoadenylate synthetase 1 [Source:HGNC Symbol;Acc:HGNC:8086]3073.7810.6396Yes
26STAP1signal transducing adaptor family member 1 [Source:HGNC Symbol;Acc:HGNC:24133]3243.7080.6612Yes
27MGAMmaltase-glucoamylase [Source:HGNC Symbol;Acc:HGNC:7043]3473.6080.6820Yes
28OAS22'-5'-oligoadenylate synthetase 2 [Source:HGNC Symbol;Acc:HGNC:8087]3493.6050.7034Yes
29EPSTI1epithelial stromal interaction 1 [Source:HGNC Symbol;Acc:HGNC:16465]3743.5570.7239Yes
30OAS32'-5'-oligoadenylate synthetase 3 [Source:HGNC Symbol;Acc:HGNC:8088]4193.3940.7428Yes
31LGALS3BPgalectin 3 binding protein [Source:HGNC Symbol;Acc:HGNC:6564]5563.0950.7575Yes
32PARP9poly(ADP-ribose) polymerase family member 9 [Source:HGNC Symbol;Acc:HGNC:24118]5803.0350.7749Yes
33PNPT1polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166]5942.9980.7924Yes
34DTX3Ldeltex E3 ubiquitin ligase 3L [Source:HGNC Symbol;Acc:HGNC:30323]9182.4590.7983Yes
35ISG15ISG15 ubiquitin like modifier [Source:HGNC Symbol;Acc:HGNC:4053]10252.2760.8089Yes
36HERC5HECT and RLD domain containing E3 ubiquitin protein ligase 5 [Source:HGNC Symbol;Acc:HGNC:24368]15621.7520.8048Yes
37IFI44Linterferon induced protein 44 like [Source:HGNC Symbol;Acc:HGNC:17817]19121.4580.8040Yes
38PLSCR1phospholipid scramblase 1 [Source:HGNC Symbol;Acc:HGNC:9092]20721.3790.8079Yes
39CCL2C-C motif chemokine ligand 2 [Source:HGNC Symbol;Acc:HGNC:10618]21801.3100.8128Yes
40IFIT3interferon induced protein with tetratricopeptide repeats 3 [Source:HGNC Symbol;Acc:HGNC:5411]22901.2530.8173Yes
41PDZK1IP1PDZK1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:16887]22941.2520.8247Yes
42SH3BGRL2SH3 domain binding glutamate rich protein like 2 [Source:HGNC Symbol;Acc:HGNC:15567]23241.2310.8312Yes
43LAP3leucine aminopeptidase 3 [Source:HGNC Symbol;Acc:HGNC:18449]29360.9130.8201No
44MYL9myosin light chain 9 [Source:HGNC Symbol;Acc:HGNC:15754]35450.6650.8076No
45TMEM140transmembrane protein 140 [Source:HGNC Symbol;Acc:HGNC:21870]40360.4750.7972No
46SCO2synthesis of cytochrome C oxidase 2 [Source:HGNC Symbol;Acc:HGNC:10604]44200.4660.7896No
47IFI27interferon alpha inducible protein 27 [Source:HGNC Symbol;Acc:HGNC:5397]52110.2110.7695No
48RPS23ribosomal protein S23 [Source:HGNC Symbol;Acc:HGNC:10410]58980.0190.7511No
49HES4hes family bHLH transcription factor 4 [Source:HGNC Symbol;Acc:HGNC:24149]68740.0000.7247No
50ARG1arginase 1 [Source:HGNC Symbol;Acc:HGNC:663]69750.0000.7220No
51CD163CD163 molecule [Source:HGNC Symbol;Acc:HGNC:1631]74180.0000.7101No
52LY6Elymphocyte antigen 6 family member E [Source:HGNC Symbol;Acc:HGNC:6727]89340.0000.6691No
53FCER1AFc fragment of IgE receptor Ia [Source:HGNC Symbol;Acc:HGNC:3609]96110.0000.6509No
54TYMPthymidine phosphorylase [Source:HGNC Symbol;Acc:HGNC:3148]99530.0000.6417No
55RTP4receptor transporter protein 4 [Source:HGNC Symbol;Acc:HGNC:23992]102550.0000.6335No
56GZMBgranzyme B [Source:HGNC Symbol;Acc:HGNC:4709]119750.0000.5871No
57APOBEC3Aapolipoprotein B mRNA editing enzyme catalytic subunit 3A [Source:HGNC Symbol;Acc:HGNC:17343]122910.0000.5785No
58APOBEC3Bapolipoprotein B mRNA editing enzyme catalytic subunit 3B [Source:HGNC Symbol;Acc:HGNC:17352]122930.0000.5785No
59TCL1AT cell leukemia/lymphoma 1A [Source:HGNC Symbol;Acc:HGNC:11648]129030.0000.5621No
60TNFAIP6TNF alpha induced protein 6 [Source:HGNC Symbol;Acc:HGNC:11898]153690.0000.4954No
61G0S2G0/G1 switch 2 [Source:HGNC Symbol;Acc:HGNC:30229]157200.0000.4860No
62GP9glycoprotein IX platelet [Source:HGNC Symbol;Acc:HGNC:4444]170830.0000.4492No
63SERPING1serpin family G member 1 [Source:HGNC Symbol;Acc:HGNC:1228]177560.0000.4310No
64SPON2spondin 2 [Source:HGNC Symbol;Acc:HGNC:11253]189710.0000.3982No
65CXCL8C-X-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:6025]194820.0000.3844No
66CHI3L1chitinase 3 like 1 [Source:HGNC Symbol;Acc:HGNC:1932]198960.0000.3732No
67IFIT5interferon induced protein with tetratricopeptide repeats 5 [Source:HGNC Symbol;Acc:HGNC:13328]201420.0000.3666No
68KCNJ15potassium inwardly rectifying channel subfamily J member 15 [Source:HGNC Symbol;Acc:HGNC:6261]207900.0000.3491No
69KLRD1killer cell lectin like receptor D1 [Source:HGNC Symbol;Acc:HGNC:6378]208730.0000.3469No
70LAMP3lysosomal associated membrane protein 3 [Source:HGNC Symbol;Acc:HGNC:14582]214640.0000.3310No
71CABP5calcium binding protein 5 [Source:HGNC Symbol;Acc:HGNC:13714]217380.0000.3236No
72ZBP1Z-DNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:16176]230020.0000.2895No
73MS4A4Amembrane spanning 4-domains A4A [Source:HGNC Symbol;Acc:HGNC:13371]231330.0000.2859No
74XAF1XIAP associated factor 1 [Source:HGNC Symbol;Acc:HGNC:30932]244180.0000.2512No
75C1QBcomplement C1q B chain [Source:HGNC Symbol;Acc:HGNC:1242]248120.0000.2406No
76C1QAcomplement C1q A chain [Source:HGNC Symbol;Acc:HGNC:1241]248130.0000.2406No
77C1QCcomplement C1q C chain [Source:HGNC Symbol;Acc:HGNC:1245]248310.0000.2402No
78FFAR2free fatty acid receptor 2 [Source:HGNC Symbol;Acc:HGNC:4501]254120.0000.2245No
79IFI6interferon alpha inducible protein 6 [Source:HGNC Symbol;Acc:HGNC:4054]254260.0000.2241No
80MMP25matrix metallopeptidase 25 [Source:HGNC Symbol;Acc:HGNC:14246]256220.0000.2189No
81CMTM5CKLF like MARVEL transmembrane domain containing 5 [Source:HGNC Symbol;Acc:HGNC:19176]269220.0000.1837No
82CMTM2CKLF like MARVEL transmembrane domain containing 2 [Source:HGNC Symbol;Acc:HGNC:19173]269360.0000.1834No
83TRBV27T cell receptor beta variable 27 [Source:HGNC Symbol;Acc:HGNC:12208]275730.0000.1662No
84CCL8C-C motif chemokine ligand 8 [Source:HGNC Symbol;Acc:HGNC:10635]278210.0000.1595No
85EGR1early growth response 1 [Source:HGNC Symbol;Acc:HGNC:3238]29900-0.4690.1061No
86CLUclusterin [Source:HGNC Symbol;Acc:HGNC:2095]32096-1.1340.0536No
87ITGA2Bintegrin subunit alpha 2b [Source:HGNC Symbol;Acc:HGNC:6138]32507-1.2330.0498No
88EGR2early growth response 2 [Source:HGNC Symbol;Acc:HGNC:3239]33049-1.4750.0439No
89TREML1triggering receptor expressed on myeloid cells like 1 [Source:HGNC Symbol;Acc:HGNC:20434]34291-2.0710.0227No
90CYP4F3cytochrome P450 family 4 subfamily F member 3 [Source:HGNC Symbol;Acc:HGNC:2646]34550-2.1960.0288No
91PROS1protein S [Source:HGNC Symbol;Acc:HGNC:9456]35411-2.7650.0219No
92JUPjunction plakoglobin [Source:HGNC Symbol;Acc:HGNC:6207]36556-3.9460.0144No
Table: GSEA details [plain text format]



Fig 2: HECKER_IFNB1_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: HECKER_IFNB1_TARGETS: Random ES distribution   
Gene set null distribution of ES for HECKER_IFNB1_TARGETS