Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetISHIDA_E2F_TARGETS
Enrichment Score (ES)-0.8696266
Normalized Enrichment Score (NES)-1.6747706
Nominal p-value0.0
FDR q-value0.0012714028
FWER p-Value0.027
Table: GSEA Results Summary



Fig 1: Enrichment plot: ISHIDA_E2F_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1SLBPstem-loop binding protein [Source:HGNC Symbol;Acc:HGNC:10904]56760.088-0.1527No
2ANXA8L1annexin A8 like 1 [Source:HGNC Symbol;Acc:HGNC:23334]269700.000-0.7275No
3PCNAproliferating cell nuclear antigen [Source:HGNC Symbol;Acc:HGNC:8729]32234-1.194-0.8619Yes
4DCTPP1dCTP pyrophosphatase 1 [Source:HGNC Symbol;Acc:HGNC:28777]32455-1.232-0.8599Yes
5CDT1chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:HGNC:24576]32607-1.270-0.8558Yes
6PTTG1PTTG1 regulator of sister chromatid separation, securin [Source:HGNC Symbol;Acc:HGNC:9690]32691-1.316-0.8496Yes
7RFC3replication factor C subunit 3 [Source:HGNC Symbol;Acc:HGNC:9971]33302-1.578-0.8559Yes
8CDK1cyclin dependent kinase 1 [Source:HGNC Symbol;Acc:HGNC:1722]33303-1.578-0.8457Yes
9KPNA2karyopherin subunit alpha 2 [Source:HGNC Symbol;Acc:HGNC:6395]33683-1.743-0.8447Yes
10FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]33804-1.813-0.8363Yes
11HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34287-2.069-0.8359Yes
12DBF4DBF4 zinc finger [Source:HGNC Symbol;Acc:HGNC:17364]34861-2.396-0.8360Yes
13RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]34863-2.398-0.8205Yes
14CDK2cyclin dependent kinase 2 [Source:HGNC Symbol;Acc:HGNC:1771]34953-2.448-0.8072Yes
15PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35069-2.538-0.7939Yes
16SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35087-2.553-0.7779Yes
17MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35150-2.598-0.7629Yes
18DUTdeoxyuridine triphosphatase [Source:HGNC Symbol;Acc:HGNC:3078]35154-2.602-0.7462Yes
19TRIP13thyroid hormone receptor interactor 13 [Source:HGNC Symbol;Acc:HGNC:12307]35157-2.606-0.7294Yes
20RRM1ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]35160-2.606-0.7127Yes
21EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35361-2.726-0.7005Yes
22DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]35673-3.046-0.6893Yes
23LBRlamin B receptor [Source:HGNC Symbol;Acc:HGNC:6518]35913-3.275-0.6746Yes
24CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]36019-3.358-0.6558Yes
25MCM7minichromosome maintenance complex component 7 [Source:HGNC Symbol;Acc:HGNC:6950]36039-3.372-0.6346Yes
26TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36054-3.383-0.6132Yes
27CDCA7cell division cycle associated 7 [Source:HGNC Symbol;Acc:HGNC:14628]36057-3.385-0.5914Yes
28STMN1stathmin 1 [Source:HGNC Symbol;Acc:HGNC:6510]36157-3.491-0.5716Yes
29BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36172-3.498-0.5494Yes
30UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36288-3.614-0.5293Yes
31SGO1shugoshin 1 [Source:HGNC Symbol;Acc:HGNC:25088]36304-3.637-0.5062Yes
32ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]36324-3.663-0.4831Yes
33LIG1DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]36371-3.711-0.4605Yes
34KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36388-3.732-0.4368Yes
35RPA1replication protein A1 [Source:HGNC Symbol;Acc:HGNC:10289]36406-3.765-0.4130Yes
36RB1RB transcriptional corepressor 1 [Source:HGNC Symbol;Acc:HGNC:9884]36440-3.801-0.3894Yes
37CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36488-3.857-0.3658Yes
38NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36519-3.907-0.3415Yes
39NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36576-3.975-0.3174Yes
40ANLNanillin actin binding protein [Source:HGNC Symbol;Acc:HGNC:14082]36582-3.982-0.2918Yes
41AURKBaurora kinase B [Source:HGNC Symbol;Acc:HGNC:11390]36589-3.996-0.2662Yes
42PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36590-3.998-0.2405Yes
43CDKN2Ccyclin dependent kinase inhibitor 2C [Source:HGNC Symbol;Acc:HGNC:1789]36685-4.099-0.2166Yes
44CCNB2cyclin B2 [Source:HGNC Symbol;Acc:HGNC:1580]36709-4.137-0.1906Yes
45CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]36735-4.169-0.1644Yes
46RRM2ribonucleotide reductase regulatory subunit M2 [Source:HGNC Symbol;Acc:HGNC:10452]36786-4.241-0.1384Yes
47HMGB3high mobility group box 3 [Source:HGNC Symbol;Acc:HGNC:5004]36819-4.299-0.1115Yes
48CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36838-4.351-0.0840Yes
49E2F8E2F transcription factor 8 [Source:HGNC Symbol;Acc:HGNC:24727]36887-4.439-0.0567Yes
50TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37007-4.708-0.0295Yes
51MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]37062-4.9280.0008Yes
Table: GSEA details [plain text format]



Fig 2: ISHIDA_E2F_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: ISHIDA_E2F_TARGETS: Random ES distribution   
Gene set null distribution of ES for ISHIDA_E2F_TARGETS