Datasetgreenberg_collapsed_to_symbols.Nof1.cls
#KO_LPS_versus_KO_NA.Nof1.cls
#KO_LPS_versus_KO_NA_repos
PhenotypeNof1.cls#KO_LPS_versus_KO_NA_repos
Upregulated in classKO_NA
GeneSetKONG_E2F3_TARGETS
Enrichment Score (ES)-0.8218036
Normalized Enrichment Score (NES)-1.6942809
Nominal p-value0.0
FDR q-value0.0012015281
FWER p-Value0.017
Table: GSEA Results Summary



Fig 1: Enrichment plot: KONG_E2F3_TARGETS   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLTITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAS5growth arrest specific 5 [Source:HGNC Symbol;Acc:HGNC:16355]5153.193-0.0010No
2NR1D1nuclear receptor subfamily 1 group D member 1 [Source:HGNC Symbol;Acc:HGNC:7962]16741.667-0.0255No
3TAL2TAL bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11557]18861.476-0.0253No
4E2F3E2F transcription factor 3 [Source:HGNC Symbol;Acc:HGNC:3115]27471.006-0.0445No
5SRSF7serine and arginine rich splicing factor 7 [Source:HGNC Symbol;Acc:HGNC:10789]33210.753-0.0569No
6MED1mediator complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:9234]36770.604-0.0640No
7DCKdeoxycytidine kinase [Source:HGNC Symbol;Acc:HGNC:2704]37980.562-0.0650No
8H4C15H4 clustered histone 15 [Source:HGNC Symbol;Acc:HGNC:29607]124760.000-0.2996No
9CDCA5cell division cycle associated 5 [Source:HGNC Symbol;Acc:HGNC:14626]166630.000-0.4127No
10SYCE2synaptonemal complex central element protein 2 [Source:HGNC Symbol;Acc:HGNC:27411]169420.000-0.4202No
11MYBMYB proto-oncogene, transcription factor [Source:HGNC Symbol;Acc:HGNC:7545]191990.000-0.4812No
12GP1BAglycoprotein Ib platelet subunit alpha [Source:HGNC Symbol;Acc:HGNC:4439]201900.000-0.5080No
13CENPHcentromere protein H [Source:HGNC Symbol;Acc:HGNC:17268]210410.000-0.5310No
14IGF2BP1insulin like growth factor 2 mRNA binding protein 1 [Source:HGNC Symbol;Acc:HGNC:28866]211280.000-0.5333No
15PRLprolactin [Source:HGNC Symbol;Acc:HGNC:9445]248000.000-0.6325No
16PSORS1C2psoriasis susceptibility 1 candidate 2 [Source:HGNC Symbol;Acc:HGNC:17199]254900.000-0.6511No
17F13A1coagulation factor XIII A chain [Source:HGNC Symbol;Acc:HGNC:3531]277180.000-0.7113No
18RPL12ribosomal protein L12 [Source:HGNC Symbol;Acc:HGNC:10302]28954-0.222-0.7438No
19FBXO45F-box protein 45 [Source:HGNC Symbol;Acc:HGNC:29148]29117-0.259-0.7471No
20RBBP8RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]29740-0.427-0.7622No
21MAPK8mitogen-activated protein kinase 8 [Source:HGNC Symbol;Acc:HGNC:6881]30472-0.612-0.7795No
22TAF1DTATA-box binding protein associated factor, RNA polymerase I subunit D [Source:HGNC Symbol;Acc:HGNC:28759]31957-1.079-0.8153No
23TYMSthymidylate synthetase [Source:HGNC Symbol;Acc:HGNC:12441]32088-1.131-0.8142No
24RPRD1Bregulation of nuclear pre-mRNA domain containing 1B [Source:HGNC Symbol;Acc:HGNC:16209]32199-1.175-0.8124No
25NUP50nucleoporin 50 [Source:HGNC Symbol;Acc:HGNC:8065]32509-1.233-0.8158No
26SPDL1spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:HGNC:26010]32733-1.333-0.8164Yes
27HJURPHolliday junction recognition protein [Source:HGNC Symbol;Acc:HGNC:25444]32737-1.335-0.8111Yes
28FAM111Afamily with sequence similarity 111 member A [Source:HGNC Symbol;Acc:HGNC:24725]32781-1.353-0.8068Yes
29RPL3ribosomal protein L3 [Source:HGNC Symbol;Acc:HGNC:10332]33021-1.462-0.8073Yes
30SKP2S-phase kinase associated protein 2 [Source:HGNC Symbol;Acc:HGNC:10901]33233-1.548-0.8068Yes
31LMNB1lamin B1 [Source:HGNC Symbol;Acc:HGNC:6637]33291-1.571-0.8019Yes
32USP1ubiquitin specific peptidase 1 [Source:HGNC Symbol;Acc:HGNC:12607]33618-1.730-0.8037Yes
33FEN1flap structure-specific endonuclease 1 [Source:HGNC Symbol;Acc:HGNC:3650]33804-1.813-0.8014Yes
34CENPQcentromere protein Q [Source:HGNC Symbol;Acc:HGNC:21347]34128-1.984-0.8021Yes
35RBL1RB transcriptional corepressor like 1 [Source:HGNC Symbol;Acc:HGNC:9893]34208-2.028-0.7960Yes
36NASPnuclear autoantigenic sperm protein [Source:HGNC Symbol;Acc:HGNC:7644]34283-2.068-0.7897Yes
37HMGB2high mobility group box 2 [Source:HGNC Symbol;Acc:HGNC:5000]34287-2.069-0.7814Yes
38H2AC4H2A clustered histone 4 [Source:HGNC Symbol;Acc:HGNC:4734]34680-2.278-0.7828Yes
39BRCA1BRCA1 DNA repair associated [Source:HGNC Symbol;Acc:HGNC:1100]34852-2.390-0.7777Yes
40RAD51RAD51 recombinase [Source:HGNC Symbol;Acc:HGNC:9817]34863-2.398-0.7683Yes
41NCAPG2non-SMC condensin II complex subunit G2 [Source:HGNC Symbol;Acc:HGNC:21904]34889-2.412-0.7592Yes
42PRIM1DNA primase subunit 1 [Source:HGNC Symbol;Acc:HGNC:9369]35069-2.538-0.7537Yes
43SMC2structural maintenance of chromosomes 2 [Source:HGNC Symbol;Acc:HGNC:14011]35087-2.553-0.7439Yes
44MCM3minichromosome maintenance complex component 3 [Source:HGNC Symbol;Acc:HGNC:6945]35150-2.598-0.7350Yes
45CDC7cell division cycle 7 [Source:HGNC Symbol;Acc:HGNC:1745]35348-2.720-0.7293Yes
46EZH2enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:HGNC Symbol;Acc:HGNC:3527]35361-2.726-0.7186Yes
47TPX2TPX2 microtubule nucleation factor [Source:HGNC Symbol;Acc:HGNC:1249]35409-2.763-0.7087Yes
48ERCC6LERCC excision repair 6 like, spindle assembly checkpoint helicase [Source:HGNC Symbol;Acc:HGNC:20794]35489-2.826-0.6994Yes
49FIGNL1fidgetin like 1 [Source:HGNC Symbol;Acc:HGNC:13286]35491-2.828-0.6880Yes
50DLGAP5DLG associated protein 5 [Source:HGNC Symbol;Acc:HGNC:16864]35546-2.882-0.6778Yes
51DNA2DNA replication helicase/nuclease 2 [Source:HGNC Symbol;Acc:HGNC:2939]35673-3.046-0.6689Yes
52TACC3transforming acidic coiled-coil containing protein 3 [Source:HGNC Symbol;Acc:HGNC:11524]35721-3.059-0.6577Yes
53PCLAFPCNA clamp associated factor [Source:HGNC Symbol;Acc:HGNC:28961]35722-3.059-0.6454Yes
54UBE2Cubiquitin conjugating enzyme E2 C [Source:HGNC Symbol;Acc:HGNC:15937]35837-3.176-0.6356Yes
55CENPKcentromere protein K [Source:HGNC Symbol;Acc:HGNC:29479]35844-3.180-0.6229Yes
56IQGAP3IQ motif containing GTPase activating protein 3 [Source:HGNC Symbol;Acc:HGNC:20669]35851-3.186-0.6101Yes
57NCAPGnon-SMC condensin I complex subunit G [Source:HGNC Symbol;Acc:HGNC:24304]35853-3.190-0.5973Yes
58SHCBP1SHC binding and spindle associated 1 [Source:HGNC Symbol;Acc:HGNC:29547]35958-3.323-0.5866Yes
59RAD54LRAD54 like [Source:HGNC Symbol;Acc:HGNC:9826]36017-3.355-0.5746Yes
60CCNB1cyclin B1 [Source:HGNC Symbol;Acc:HGNC:1579]36019-3.358-0.5610Yes
61PBKPDZ binding kinase [Source:HGNC Symbol;Acc:HGNC:18282]36027-3.367-0.5476Yes
62TOP2ADNA topoisomerase II alpha [Source:HGNC Symbol;Acc:HGNC:11989]36054-3.383-0.5346Yes
63BUB1BBUB1 mitotic checkpoint serine/threonine kinase B [Source:HGNC Symbol;Acc:HGNC:1149]36096-3.434-0.5218Yes
64KIF20Akinesin family member 20A [Source:HGNC Symbol;Acc:HGNC:9787]36110-3.445-0.5082Yes
65PSIP1PC4 and SFRS1 interacting protein 1 [Source:HGNC Symbol;Acc:HGNC:9527]36116-3.452-0.4944Yes
66AURKAaurora kinase A [Source:HGNC Symbol;Acc:HGNC:11393]36154-3.490-0.4813Yes
67CCNFcyclin F [Source:HGNC Symbol;Acc:HGNC:1591]36167-3.496-0.4674Yes
68BUB1BUB1 mitotic checkpoint serine/threonine kinase [Source:HGNC Symbol;Acc:HGNC:1148]36172-3.498-0.4534Yes
69INCENPinner centromere protein [Source:HGNC Symbol;Acc:HGNC:6058]36189-3.522-0.4396Yes
70UBE2Tubiquitin conjugating enzyme E2 T [Source:HGNC Symbol;Acc:HGNC:25009]36288-3.614-0.4276Yes
71ASF1Banti-silencing function 1B histone chaperone [Source:HGNC Symbol;Acc:HGNC:20996]36324-3.663-0.4137Yes
72RAD51AP1RAD51 associated protein 1 [Source:HGNC Symbol;Acc:HGNC:16956]36360-3.688-0.3997Yes
73KIF2Ckinesin family member 2C [Source:HGNC Symbol;Acc:HGNC:6393]36388-3.732-0.3853Yes
74NCAPD2non-SMC condensin I complex subunit D2 [Source:HGNC Symbol;Acc:HGNC:24305]36460-3.819-0.3718Yes
75DEPDC1DEP domain containing 1 [Source:HGNC Symbol;Acc:HGNC:22949]36474-3.838-0.3566Yes
76CDC20cell division cycle 20 [Source:HGNC Symbol;Acc:HGNC:1723]36488-3.857-0.3414Yes
77HMMRhyaluronan mediated motility receptor [Source:HGNC Symbol;Acc:HGNC:5012]36512-3.898-0.3262Yes
78NCAPHnon-SMC condensin I complex subunit H [Source:HGNC Symbol;Acc:HGNC:1112]36519-3.907-0.3106Yes
79RACGAP1Rac GTPase activating protein 1 [Source:HGNC Symbol;Acc:HGNC:9804]36572-3.970-0.2959Yes
80NUSAP1nucleolar and spindle associated protein 1 [Source:HGNC Symbol;Acc:HGNC:18538]36576-3.975-0.2799Yes
81CDC6cell division cycle 6 [Source:HGNC Symbol;Acc:HGNC:1744]36584-3.986-0.2639Yes
82PRC1protein regulator of cytokinesis 1 [Source:HGNC Symbol;Acc:HGNC:9341]36590-3.998-0.2479Yes
83H2AXH2A.X variant histone [Source:HGNC Symbol;Acc:HGNC:4739]36591-3.999-0.2317Yes
84CBX2chromobox 2 [Source:HGNC Symbol;Acc:HGNC:1552]36600-4.010-0.2157Yes
85CENPFcentromere protein F [Source:HGNC Symbol;Acc:HGNC:1857]36606-4.015-0.1996Yes
86PLK1polo like kinase 1 [Source:HGNC Symbol;Acc:HGNC:9077]36660-4.066-0.1845Yes
87HLXH2.0 like homeobox [Source:HGNC Symbol;Acc:HGNC:4978]36663-4.073-0.1681Yes
88KIF11kinesin family member 11 [Source:HGNC Symbol;Acc:HGNC:6388]36668-4.079-0.1517Yes
89CCNE1cyclin E1 [Source:HGNC Symbol;Acc:HGNC:1589]36735-4.169-0.1366Yes
90SPC25SPC25 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:24031]36783-4.238-0.1207Yes
91MELKmaternal embryonic leucine zipper kinase [Source:HGNC Symbol;Acc:HGNC:16870]36795-4.256-0.1038Yes
92CCNA2cyclin A2 [Source:HGNC Symbol;Acc:HGNC:1578]36838-4.351-0.0873Yes
93NUF2NUF2 component of NDC80 kinetochore complex [Source:HGNC Symbol;Acc:HGNC:14621]36883-4.431-0.0706Yes
94CDCA3cell division cycle associated 3 [Source:HGNC Symbol;Acc:HGNC:14624]36915-4.481-0.0533Yes
95CHAF1Bchromatin assembly factor 1 subunit B [Source:HGNC Symbol;Acc:HGNC:1911]36994-4.675-0.0365Yes
96TK1thymidine kinase 1 [Source:HGNC Symbol;Acc:HGNC:11830]37007-4.708-0.0177Yes
97MKI67marker of proliferation Ki-67 [Source:HGNC Symbol;Acc:HGNC:7107]37062-4.9280.0008Yes
Table: GSEA details [plain text format]



Fig 2: KONG_E2F3_TARGETS   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: KONG_E2F3_TARGETS: Random ES distribution   
Gene set null distribution of ES for KONG_E2F3_TARGETS